Protein–RNA interactions for Protein: P02788

LTF, Lactotransferrin, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTFP02788 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC28.49■■■□□ 2.15
LTFP02788 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC28.48■■■□□ 2.15
LTFP02788 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
LTFP02788 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC28.47■■■□□ 2.15
LTFP02788 SUZ12P1-203ENST00000578195 985 ntBASIC28.47■■■□□ 2.15
LTFP02788 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
LTFP02788 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
LTFP02788 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
LTFP02788 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
LTFP02788 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
LTFP02788 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
LTFP02788 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
LTFP02788 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
LTFP02788 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
LTFP02788 EBPL-202ENST00000378268 680 ntTSL 3 BASIC28.41■■■□□ 2.14
LTFP02788 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC28.41■■■□□ 2.14
LTFP02788 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
LTFP02788 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
LTFP02788 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC28.39■■■□□ 2.14
LTFP02788 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
LTFP02788 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
LTFP02788 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
LTFP02788 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
LTFP02788 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
LTFP02788 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
LTFP02788 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.36■■■□□ 2.13
LTFP02788 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
LTFP02788 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
LTFP02788 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
LTFP02788 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
LTFP02788 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
LTFP02788 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.34■■■□□ 2.13
LTFP02788 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC28.34■■■□□ 2.13
LTFP02788 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
LTFP02788 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
LTFP02788 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC28.33■■■□□ 2.13
LTFP02788 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC28.33■■■□□ 2.13
LTFP02788 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
LTFP02788 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
LTFP02788 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
LTFP02788 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
LTFP02788 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
LTFP02788 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
LTFP02788 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
LTFP02788 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
LTFP02788 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
LTFP02788 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.21■■■□□ 2.11
LTFP02788 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
LTFP02788 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
LTFP02788 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
LTFP02788 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
LTFP02788 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
LTFP02788 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
LTFP02788 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
LTFP02788 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
LTFP02788 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
LTFP02788 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
LTFP02788 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
LTFP02788 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
LTFP02788 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.14■■■□□ 2.1
LTFP02788 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC28.13■■■□□ 2.09
LTFP02788 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
LTFP02788 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.11■■■□□ 2.09
LTFP02788 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28.11■■■□□ 2.09
LTFP02788 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.11■■■□□ 2.09
LTFP02788 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
LTFP02788 MIR762-201ENST00000390236 83 ntBASIC28.1■■■□□ 2.09
LTFP02788 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
LTFP02788 AL161658.1-201ENST00000623641 1967 ntBASIC28.1■■■□□ 2.09
LTFP02788 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC28.09■■■□□ 2.09
LTFP02788 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
LTFP02788 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
LTFP02788 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.08■■■□□ 2.09
LTFP02788 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
LTFP02788 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.08■■■□□ 2.09
LTFP02788 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
LTFP02788 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
LTFP02788 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.06■■■□□ 2.08
LTFP02788 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
LTFP02788 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
LTFP02788 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
LTFP02788 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
LTFP02788 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
LTFP02788 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
LTFP02788 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
LTFP02788 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.03■■■□□ 2.08
LTFP02788 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.02■■■□□ 2.08
LTFP02788 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
LTFP02788 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.02■■■□□ 2.08
LTFP02788 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
LTFP02788 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
LTFP02788 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
LTFP02788 AP006261.1-201ENST00000584783 668 ntBASIC28.01■■■□□ 2.07
LTFP02788 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.01■■■□□ 2.07
LTFP02788 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
LTFP02788 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28■■■□□ 2.07
LTFP02788 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28■■■□□ 2.07
LTFP02788 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28■■■□□ 2.07
LTFP02788 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
LTFP02788 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms