Protein–RNA interactions for Protein: P02788

LTF, Lactotransferrin, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTFP02788 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.9■■■■□ 3.34
LTFP02788 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
LTFP02788 AL356512.1-201ENST00000607453 1739 ntBASIC34.89■■■■□ 3.18
LTFP02788 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.89■■■■□ 3.18
LTFP02788 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
LTFP02788 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
LTFP02788 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.52■■■■□ 3.12
LTFP02788 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.31■■■■□ 3.08
LTFP02788 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.01■■■■□ 3.03
LTFP02788 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.96■■■■□ 3.03
LTFP02788 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.85■■■■□ 3.01
LTFP02788 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.74■■■□□ 2.99
LTFP02788 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.69■■■□□ 2.98
LTFP02788 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.56■■■□□ 2.96
LTFP02788 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
LTFP02788 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.3■■■□□ 2.92
LTFP02788 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.2■■■□□ 2.91
LTFP02788 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.12■■■□□ 2.89
LTFP02788 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.09■■■□□ 2.89
LTFP02788 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.94■■■□□ 2.86
LTFP02788 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.9■■■□□ 2.86
LTFP02788 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.75■■■□□ 2.83
LTFP02788 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
LTFP02788 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.48■■■□□ 2.79
LTFP02788 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
LTFP02788 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
LTFP02788 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC32.39■■■□□ 2.78
LTFP02788 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.27■■■□□ 2.76
LTFP02788 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
LTFP02788 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
LTFP02788 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.2■■■□□ 2.75
LTFP02788 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
LTFP02788 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
LTFP02788 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.1■■■□□ 2.73
LTFP02788 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
LTFP02788 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.06■■■□□ 2.72
LTFP02788 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
LTFP02788 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.98■■■□□ 2.71
LTFP02788 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.95■■■□□ 2.7
LTFP02788 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
LTFP02788 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
LTFP02788 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.89■■■□□ 2.7
LTFP02788 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.82■■■□□ 2.69
LTFP02788 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
LTFP02788 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
LTFP02788 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
LTFP02788 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.67
LTFP02788 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
LTFP02788 AC015813.7-201ENST00000623294 581 ntBASIC31.53■■■□□ 2.64
LTFP02788 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.63
LTFP02788 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.42■■■□□ 2.62
LTFP02788 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
LTFP02788 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
LTFP02788 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.27■■■□□ 2.6
LTFP02788 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.24■■■□□ 2.59
LTFP02788 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
LTFP02788 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.21■■■□□ 2.59
LTFP02788 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
LTFP02788 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
LTFP02788 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
LTFP02788 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
LTFP02788 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.12■■■□□ 2.57
LTFP02788 AC006077.2-201ENST00000623591 457 ntBASIC31.08■■■□□ 2.57
LTFP02788 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
LTFP02788 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
LTFP02788 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
LTFP02788 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
LTFP02788 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
LTFP02788 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
LTFP02788 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
LTFP02788 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
LTFP02788 ZNRF2P1-201ENST00000441407 443 ntBASIC30.93■■■□□ 2.54
LTFP02788 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
LTFP02788 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.83■■■□□ 2.53
LTFP02788 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
LTFP02788 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
LTFP02788 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
LTFP02788 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
LTFP02788 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
LTFP02788 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
LTFP02788 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.63■■■□□ 2.49
LTFP02788 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
LTFP02788 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
LTFP02788 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
LTFP02788 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
LTFP02788 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.55■■■□□ 2.48
LTFP02788 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
LTFP02788 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
LTFP02788 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.5■■■□□ 2.47
LTFP02788 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
LTFP02788 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.49■■■□□ 2.47
LTFP02788 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
LTFP02788 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.46■■■□□ 2.47
LTFP02788 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
LTFP02788 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
LTFP02788 AC145285.7-201ENST00000614819 1539 ntBASIC30.35■■■□□ 2.45
LTFP02788 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
LTFP02788 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.33■■■□□ 2.45
LTFP02788 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
LTFP02788 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 612.3 ms