Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
SMC2O95347 AP002365.1-201ENST00000603448 772 ntBASIC30.51■■■□□ 2.47
SMC2O95347 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SMC2O95347 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
SMC2O95347 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SMC2O95347 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SMC2O95347 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SMC2O95347 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
SMC2O95347 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.48■■■□□ 2.47
SMC2O95347 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SMC2O95347 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SMC2O95347 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
SMC2O95347 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
SMC2O95347 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.46■■■□□ 2.47
SMC2O95347 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SMC2O95347 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.45■■■□□ 2.46
SMC2O95347 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.43■■■□□ 2.46
SMC2O95347 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.41■■■□□ 2.46
SMC2O95347 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.4■■■□□ 2.46
SMC2O95347 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SMC2O95347 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.39■■■□□ 2.46
SMC2O95347 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SMC2O95347 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
SMC2O95347 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SMC2O95347 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SMC2O95347 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SMC2O95347 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SMC2O95347 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.34■■■□□ 2.45
SMC2O95347 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMC2O95347 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
SMC2O95347 ABCB10P3-201ENST00000561950 2166 ntBASIC30.31■■■□□ 2.44
SMC2O95347 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.3■■■□□ 2.44
SMC2O95347 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SMC2O95347 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.3■■■□□ 2.44
SMC2O95347 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SMC2O95347 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
SMC2O95347 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
SMC2O95347 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SMC2O95347 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SMC2O95347 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
SMC2O95347 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SMC2O95347 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.24■■■□□ 2.43
SMC2O95347 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.23■■■□□ 2.43
SMC2O95347 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
SMC2O95347 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SMC2O95347 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.22■■■□□ 2.43
SMC2O95347 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
SMC2O95347 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
SMC2O95347 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.42
SMC2O95347 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
SMC2O95347 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.42
SMC2O95347 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.19■■■□□ 2.42
SMC2O95347 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SMC2O95347 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SMC2O95347 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.17■■■□□ 2.42
SMC2O95347 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SMC2O95347 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SMC2O95347 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.17■■■□□ 2.42
SMC2O95347 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SMC2O95347 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
SMC2O95347 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
SMC2O95347 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
SMC2O95347 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
SMC2O95347 SHF-206ENST00000560471 2499 ntTSL 5 BASIC30.16■■■□□ 2.42
SMC2O95347 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
SMC2O95347 AL161658.1-201ENST00000623641 1967 ntBASIC30.15■■■□□ 2.42
SMC2O95347 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SMC2O95347 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SMC2O95347 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
SMC2O95347 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.12■■■□□ 2.41
SMC2O95347 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.12■■■□□ 2.41
SMC2O95347 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.12■■■□□ 2.41
SMC2O95347 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.12■■■□□ 2.41
SMC2O95347 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SMC2O95347 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.11■■■□□ 2.41
SMC2O95347 AC139426.1-201ENST00000568218 2529 ntBASIC30.1■■■□□ 2.41
SMC2O95347 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SMC2O95347 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SMC2O95347 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
SMC2O95347 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SMC2O95347 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SMC2O95347 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
SMC2O95347 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SMC2O95347 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
SMC2O95347 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SMC2O95347 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SMC2O95347 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
SMC2O95347 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
SMC2O95347 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
SMC2O95347 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC30■■■□□ 2.39
SMC2O95347 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30■■■□□ 2.39
SMC2O95347 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SMC2O95347 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
SMC2O95347 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30■■■□□ 2.39
SMC2O95347 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
SMC2O95347 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SMC2O95347 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SMC2O95347 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
SMC2O95347 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SMC2O95347 ST7-AS1-201ENST00000456775 1889 ntBASIC29.98■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms