Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
SNRNP200O75643 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SNRNP200O75643 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SNRNP200O75643 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNRNP200O75643 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNRNP200O75643 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SNRNP200O75643 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNRNP200O75643 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.15■■□□□ 1.78
SNRNP200O75643 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SNRNP200O75643 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SNRNP200O75643 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.15■■□□□ 1.78
SNRNP200O75643 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SNRNP200O75643 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNRNP200O75643 WASH5P-204ENST00000632292 975 ntBASIC26.13■■□□□ 1.77
SNRNP200O75643 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNRNP200O75643 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.12■■□□□ 1.77
SNRNP200O75643 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SNRNP200O75643 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.12■■□□□ 1.77
SNRNP200O75643 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SNRNP200O75643 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SNRNP200O75643 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SNRNP200O75643 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SNRNP200O75643 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
SNRNP200O75643 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.08■■□□□ 1.77
SNRNP200O75643 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
SNRNP200O75643 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNRNP200O75643 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SNRNP200O75643 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNRNP200O75643 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.05■■□□□ 1.76
SNRNP200O75643 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.05■■□□□ 1.76
SNRNP200O75643 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
SNRNP200O75643 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SNRNP200O75643 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
SNRNP200O75643 AL162393.1-201ENST00000437852 946 ntBASIC26.01■■□□□ 1.75
SNRNP200O75643 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SNRNP200O75643 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26■■□□□ 1.75
SNRNP200O75643 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26■■□□□ 1.75
SNRNP200O75643 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SNRNP200O75643 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SNRNP200O75643 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SNRNP200O75643 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SNRNP200O75643 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
SNRNP200O75643 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SNRNP200O75643 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
SNRNP200O75643 RPS2P35-201ENST00000443417 897 ntBASIC25.95■■□□□ 1.74
SNRNP200O75643 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
SNRNP200O75643 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
SNRNP200O75643 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SNRNP200O75643 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SNRNP200O75643 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SNRNP200O75643 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SNRNP200O75643 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SNRNP200O75643 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.91■■□□□ 1.74
SNRNP200O75643 DUX4L28-201ENST00000623687 678 ntBASIC25.91■■□□□ 1.74
SNRNP200O75643 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SNRNP200O75643 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SNRNP200O75643 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.9■■□□□ 1.74
SNRNP200O75643 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SNRNP200O75643 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SNRNP200O75643 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SNRNP200O75643 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SNRNP200O75643 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SNRNP200O75643 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
SNRNP200O75643 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.89■■□□□ 1.74
SNRNP200O75643 AC005559.1-201ENST00000589661 871 ntBASIC25.89■■□□□ 1.74
SNRNP200O75643 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SNRNP200O75643 MIR762-201ENST00000390236 83 ntBASIC25.88■■□□□ 1.73
SNRNP200O75643 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.88■■□□□ 1.73
SNRNP200O75643 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SNRNP200O75643 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.88■■□□□ 1.73
SNRNP200O75643 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.87■■□□□ 1.73
SNRNP200O75643 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SNRNP200O75643 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.86■■□□□ 1.73
SNRNP200O75643 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SNRNP200O75643 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SNRNP200O75643 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
SNRNP200O75643 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
SNRNP200O75643 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
SNRNP200O75643 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
SNRNP200O75643 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.83■■□□□ 1.73
SNRNP200O75643 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.83■■□□□ 1.73
SNRNP200O75643 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SNRNP200O75643 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SNRNP200O75643 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
SNRNP200O75643 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SNRNP200O75643 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.81■■□□□ 1.72
SNRNP200O75643 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.81■■□□□ 1.72
SNRNP200O75643 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.81■■□□□ 1.72
SNRNP200O75643 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
SNRNP200O75643 AL161658.1-201ENST00000623641 1967 ntBASIC25.8■■□□□ 1.72
SNRNP200O75643 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SNRNP200O75643 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SNRNP200O75643 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.79■■□□□ 1.72
SNRNP200O75643 MIR3665-201ENST00000578708 105 ntBASIC25.79■■□□□ 1.72
SNRNP200O75643 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SNRNP200O75643 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.78■■□□□ 1.72
SNRNP200O75643 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.77■■□□□ 1.72
SNRNP200O75643 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
SNRNP200O75643 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.76■■□□□ 1.71
SNRNP200O75643 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms