Protein–RNA interactions for Protein: O15537

RS1, Retinoschisin, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RS1O15537 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RS1O15537 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RS1O15537 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RS1O15537 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC19.42■□□□□ 0.7
RS1O15537 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.42■□□□□ 0.7
RS1O15537 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RS1O15537 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RS1O15537 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RS1O15537 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RS1O15537 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
RS1O15537 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RS1O15537 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
RS1O15537 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RS1O15537 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.38■□□□□ 0.69
RS1O15537 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.37■□□□□ 0.69
RS1O15537 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.37■□□□□ 0.69
RS1O15537 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.36■□□□□ 0.69
RS1O15537 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RS1O15537 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
RS1O15537 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
RS1O15537 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RS1O15537 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.32■□□□□ 0.68
RS1O15537 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.32■□□□□ 0.68
RS1O15537 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RS1O15537 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RS1O15537 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.31■□□□□ 0.68
RS1O15537 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.31■□□□□ 0.68
RS1O15537 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RS1O15537 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RS1O15537 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RS1O15537 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RS1O15537 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.28■□□□□ 0.68
RS1O15537 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RS1O15537 ABCB10P1-201ENST00000614297 2181 ntBASIC19.25■□□□□ 0.67
RS1O15537 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.25■□□□□ 0.67
RS1O15537 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RS1O15537 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
RS1O15537 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RS1O15537 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RS1O15537 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RS1O15537 AL161658.1-201ENST00000623641 1967 ntBASIC19.24■□□□□ 0.67
RS1O15537 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RS1O15537 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RS1O15537 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RS1O15537 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RS1O15537 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RS1O15537 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RS1O15537 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RS1O15537 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.21■□□□□ 0.67
RS1O15537 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.21■□□□□ 0.67
RS1O15537 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RS1O15537 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RS1O15537 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RS1O15537 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RS1O15537 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RS1O15537 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RS1O15537 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RS1O15537 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RS1O15537 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.19■□□□□ 0.66
RS1O15537 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RS1O15537 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RS1O15537 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.18■□□□□ 0.66
RS1O15537 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RS1O15537 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RS1O15537 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RS1O15537 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RS1O15537 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RS1O15537 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RS1O15537 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RS1O15537 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RS1O15537 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.15■□□□□ 0.66
RS1O15537 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RS1O15537 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.15■□□□□ 0.66
RS1O15537 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RS1O15537 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RS1O15537 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RS1O15537 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
RS1O15537 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RS1O15537 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RS1O15537 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RS1O15537 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RS1O15537 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.13■□□□□ 0.65
RS1O15537 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RS1O15537 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RS1O15537 WASH5P-204ENST00000632292 975 ntBASIC19.12■□□□□ 0.65
RS1O15537 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.12■□□□□ 0.65
RS1O15537 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RS1O15537 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.11■□□□□ 0.65
RS1O15537 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RS1O15537 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RS1O15537 AL133380.1-201ENST00000506013 324 ntBASIC19.1■□□□□ 0.65
RS1O15537 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RS1O15537 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RS1O15537 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RS1O15537 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RS1O15537 ST7-AS1-201ENST00000456775 1889 ntBASIC19.09■□□□□ 0.65
RS1O15537 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RS1O15537 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RS1O15537 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RS1O15537 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms