Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
ABCC4O15439 NRG1-221ENST00000614767 762 ntTSL 5 BASIC34.93■■■■□ 3.18
ABCC4O15439 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
ABCC4O15439 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC34.92■■■■□ 3.18
ABCC4O15439 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
ABCC4O15439 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
ABCC4O15439 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC34.9■■■■□ 3.18
ABCC4O15439 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC34.89■■■■□ 3.18
ABCC4O15439 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
ABCC4O15439 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
ABCC4O15439 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
ABCC4O15439 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
ABCC4O15439 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
ABCC4O15439 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
ABCC4O15439 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC34.87■■■■□ 3.17
ABCC4O15439 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
ABCC4O15439 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC34.86■■■■□ 3.17
ABCC4O15439 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
ABCC4O15439 AP006261.1-201ENST00000584783 668 ntBASIC34.81■■■■□ 3.16
ABCC4O15439 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC34.81■■■■□ 3.16
ABCC4O15439 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
ABCC4O15439 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
ABCC4O15439 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
ABCC4O15439 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
ABCC4O15439 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
ABCC4O15439 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
ABCC4O15439 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
ABCC4O15439 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
ABCC4O15439 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC34.75■■■■□ 3.15
ABCC4O15439 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
ABCC4O15439 HNRNPLP2-201ENST00000568980 1570 ntBASIC34.74■■■■□ 3.15
ABCC4O15439 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
ABCC4O15439 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
ABCC4O15439 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
ABCC4O15439 EBPL-202ENST00000378268 680 ntTSL 3 BASIC34.72■■■■□ 3.15
ABCC4O15439 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC34.71■■■■□ 3.15
ABCC4O15439 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC34.71■■■■□ 3.15
ABCC4O15439 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
ABCC4O15439 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC34.66■■■■□ 3.14
ABCC4O15439 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC34.65■■■■□ 3.14
ABCC4O15439 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
ABCC4O15439 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC34.64■■■■□ 3.14
ABCC4O15439 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC34.63■■■■□ 3.13
ABCC4O15439 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC34.63■■■■□ 3.13
ABCC4O15439 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
ABCC4O15439 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC34.61■■■■□ 3.13
ABCC4O15439 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
ABCC4O15439 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
ABCC4O15439 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC34.58■■■■□ 3.13
ABCC4O15439 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
ABCC4O15439 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC34.57■■■■□ 3.13
ABCC4O15439 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC34.57■■■■□ 3.13
ABCC4O15439 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC34.57■■■■□ 3.12
ABCC4O15439 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC34.55■■■■□ 3.12
ABCC4O15439 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC34.55■■■■□ 3.12
ABCC4O15439 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC34.55■■■■□ 3.12
ABCC4O15439 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC34.55■■■■□ 3.12
ABCC4O15439 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC34.55■■■■□ 3.12
ABCC4O15439 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
ABCC4O15439 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
ABCC4O15439 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC34.53■■■■□ 3.12
ABCC4O15439 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC34.52■■■■□ 3.12
ABCC4O15439 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC34.51■■■■□ 3.11
ABCC4O15439 MIR3665-201ENST00000578708 105 ntBASIC34.51■■■■□ 3.11
ABCC4O15439 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC34.5■■■■□ 3.11
ABCC4O15439 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
ABCC4O15439 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
ABCC4O15439 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
ABCC4O15439 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC34.49■■■■□ 3.11
ABCC4O15439 ST7-205ENST00000393446 2114 ntTSL 5 BASIC34.47■■■■□ 3.11
ABCC4O15439 DUX4L28-201ENST00000623687 678 ntBASIC34.47■■■■□ 3.11
ABCC4O15439 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC34.47■■■■□ 3.11
ABCC4O15439 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
ABCC4O15439 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
ABCC4O15439 WASH5P-204ENST00000632292 975 ntBASIC34.44■■■■□ 3.1
ABCC4O15439 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC34.43■■■■□ 3.1
ABCC4O15439 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC34.43■■■■□ 3.1
ABCC4O15439 AC087741.3-201ENST00000624270 1347 ntBASIC34.43■■■■□ 3.1
ABCC4O15439 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC34.41■■■■□ 3.1
ABCC4O15439 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC34.41■■■■□ 3.1
ABCC4O15439 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC34.4■■■■□ 3.1
ABCC4O15439 MIR762-201ENST00000390236 83 ntBASIC34.4■■■■□ 3.1
ABCC4O15439 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
ABCC4O15439 CHML-205ENST00000638160 705 ntTSL 3 BASIC34.38■■■■□ 3.09
ABCC4O15439 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
ABCC4O15439 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC34.37■■■■□ 3.09
ABCC4O15439 ST7-202ENST00000323984 2142 ntTSL 5 BASIC34.35■■■■□ 3.09
ABCC4O15439 ST7-207ENST00000393449 2127 ntTSL 5 BASIC34.35■■■■□ 3.09
ABCC4O15439 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC34.35■■■■□ 3.09
ABCC4O15439 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC34.34■■■■□ 3.09
ABCC4O15439 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC34.32■■■■□ 3.09
ABCC4O15439 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
ABCC4O15439 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
ABCC4O15439 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
ABCC4O15439 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
ABCC4O15439 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
ABCC4O15439 ABHD17AP4-201ENST00000411545 909 ntBASIC34.3■■■■□ 3.08
ABCC4O15439 AC005559.1-201ENST00000589661 871 ntBASIC34.3■■■■□ 3.08
ABCC4O15439 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
ABCC4O15439 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC34.29■■■■□ 3.08
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms