Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.37■□□□□ 0.69
LYRM9A8MSI8 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYRM9A8MSI8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYRM9A8MSI8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LYRM9A8MSI8 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
LYRM9A8MSI8 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LYRM9A8MSI8 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LYRM9A8MSI8 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LYRM9A8MSI8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LYRM9A8MSI8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.34■□□□□ 0.69
LYRM9A8MSI8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.34■□□□□ 0.69
LYRM9A8MSI8 CAHM-201ENST00000604200 896 ntBASIC19.34■□□□□ 0.69
LYRM9A8MSI8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LYRM9A8MSI8 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LYRM9A8MSI8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYRM9A8MSI8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LYRM9A8MSI8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.32■□□□□ 0.68
LYRM9A8MSI8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYRM9A8MSI8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYRM9A8MSI8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.31■□□□□ 0.68
LYRM9A8MSI8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
LYRM9A8MSI8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LYRM9A8MSI8 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LYRM9A8MSI8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LYRM9A8MSI8 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LYRM9A8MSI8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LYRM9A8MSI8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LYRM9A8MSI8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LYRM9A8MSI8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYRM9A8MSI8 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYRM9A8MSI8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LYRM9A8MSI8 SUZ12P1-203ENST00000578195 985 ntBASIC19.26■□□□□ 0.67
LYRM9A8MSI8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LYRM9A8MSI8 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.25■□□□□ 0.67
LYRM9A8MSI8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LYRM9A8MSI8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LYRM9A8MSI8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LYRM9A8MSI8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LYRM9A8MSI8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.22■□□□□ 0.67
LYRM9A8MSI8 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LYRM9A8MSI8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.22■□□□□ 0.67
LYRM9A8MSI8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
LYRM9A8MSI8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LYRM9A8MSI8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
LYRM9A8MSI8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.2■□□□□ 0.66
LYRM9A8MSI8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LYRM9A8MSI8 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
LYRM9A8MSI8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LYRM9A8MSI8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LYRM9A8MSI8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LYRM9A8MSI8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.19■□□□□ 0.66
LYRM9A8MSI8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LYRM9A8MSI8 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
LYRM9A8MSI8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYRM9A8MSI8 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LYRM9A8MSI8 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYRM9A8MSI8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LYRM9A8MSI8 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.15■□□□□ 0.66
LYRM9A8MSI8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LYRM9A8MSI8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LYRM9A8MSI8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYRM9A8MSI8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LYRM9A8MSI8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LYRM9A8MSI8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LYRM9A8MSI8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LYRM9A8MSI8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.12■□□□□ 0.65
LYRM9A8MSI8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYRM9A8MSI8 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.12■□□□□ 0.65
LYRM9A8MSI8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LYRM9A8MSI8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.11■□□□□ 0.65
LYRM9A8MSI8 MIR762-201ENST00000390236 83 ntBASIC19.11■□□□□ 0.65
LYRM9A8MSI8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.11■□□□□ 0.65
LYRM9A8MSI8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LYRM9A8MSI8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LYRM9A8MSI8 AP006261.1-201ENST00000584783 668 ntBASIC19.1■□□□□ 0.65
LYRM9A8MSI8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LYRM9A8MSI8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LYRM9A8MSI8 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LYRM9A8MSI8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LYRM9A8MSI8 AL161658.1-201ENST00000623641 1967 ntBASIC19.08■□□□□ 0.65
LYRM9A8MSI8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
LYRM9A8MSI8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LYRM9A8MSI8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LYRM9A8MSI8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LYRM9A8MSI8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.07■□□□□ 0.64
LYRM9A8MSI8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LYRM9A8MSI8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LYRM9A8MSI8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LYRM9A8MSI8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LYRM9A8MSI8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LYRM9A8MSI8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LYRM9A8MSI8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
LYRM9A8MSI8 MIR3665-201ENST00000578708 105 ntBASIC19.05■□□□□ 0.64
LYRM9A8MSI8 AC005559.1-201ENST00000589661 871 ntBASIC19.05■□□□□ 0.64
LYRM9A8MSI8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
LYRM9A8MSI8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LYRM9A8MSI8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LYRM9A8MSI8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.04■□□□□ 0.64
LYRM9A8MSI8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LYRM9A8MSI8 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms