Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
LYRM9A8MSI8 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LYRM9A8MSI8 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
LYRM9A8MSI8 AL356512.1-201ENST00000607453 1739 ntBASIC23.74■■□□□ 1.39
LYRM9A8MSI8 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
LYRM9A8MSI8 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
LYRM9A8MSI8 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC23.51■■□□□ 1.35
LYRM9A8MSI8 HES6-203ENST00000409160 1600 ntTSL 2 BASIC23.42■■□□□ 1.34
LYRM9A8MSI8 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC23.13■■□□□ 1.29
LYRM9A8MSI8 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
LYRM9A8MSI8 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
LYRM9A8MSI8 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC23■■□□□ 1.27
LYRM9A8MSI8 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC22.95■■□□□ 1.26
LYRM9A8MSI8 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
LYRM9A8MSI8 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LYRM9A8MSI8 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
LYRM9A8MSI8 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC22.62■■□□□ 1.21
LYRM9A8MSI8 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
LYRM9A8MSI8 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC22.5■■□□□ 1.19
LYRM9A8MSI8 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
LYRM9A8MSI8 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC22.44■■□□□ 1.18
LYRM9A8MSI8 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
LYRM9A8MSI8 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
LYRM9A8MSI8 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
LYRM9A8MSI8 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
LYRM9A8MSI8 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
LYRM9A8MSI8 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LYRM9A8MSI8 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC21.94■■□□□ 1.1
LYRM9A8MSI8 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LYRM9A8MSI8 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LYRM9A8MSI8 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
LYRM9A8MSI8 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LYRM9A8MSI8 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LYRM9A8MSI8 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LYRM9A8MSI8 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LYRM9A8MSI8 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LYRM9A8MSI8 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
LYRM9A8MSI8 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
LYRM9A8MSI8 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC21.78■■□□□ 1.08
LYRM9A8MSI8 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC21.76■■□□□ 1.07
LYRM9A8MSI8 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LYRM9A8MSI8 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
LYRM9A8MSI8 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
LYRM9A8MSI8 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LYRM9A8MSI8 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC21.69■■□□□ 1.06
LYRM9A8MSI8 INO80B-203ENST00000409917 796 ntTSL 2 BASIC21.6■■□□□ 1.05
LYRM9A8MSI8 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
LYRM9A8MSI8 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LYRM9A8MSI8 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LYRM9A8MSI8 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
LYRM9A8MSI8 AC015813.7-201ENST00000623294 581 ntBASIC21.42■■□□□ 1.02
LYRM9A8MSI8 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LYRM9A8MSI8 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC21.32■■□□□ 1
LYRM9A8MSI8 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC21.31■■□□□ 1
LYRM9A8MSI8 ILK-212ENST00000532063 1617 ntTSL 2 BASIC21.3■■□□□ 1
LYRM9A8MSI8 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LYRM9A8MSI8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LYRM9A8MSI8 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC21.23■□□□□ 0.99
LYRM9A8MSI8 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC21.22■□□□□ 0.99
LYRM9A8MSI8 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LYRM9A8MSI8 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LYRM9A8MSI8 AC006077.2-201ENST00000623591 457 ntBASIC21.15■□□□□ 0.98
LYRM9A8MSI8 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LYRM9A8MSI8 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LYRM9A8MSI8 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LYRM9A8MSI8 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
LYRM9A8MSI8 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LYRM9A8MSI8 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LYRM9A8MSI8 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LYRM9A8MSI8 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LYRM9A8MSI8 ZNRF2P1-201ENST00000441407 443 ntBASIC21.03■□□□□ 0.96
LYRM9A8MSI8 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LYRM9A8MSI8 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LYRM9A8MSI8 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LYRM9A8MSI8 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LYRM9A8MSI8 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LYRM9A8MSI8 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
LYRM9A8MSI8 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC20.92■□□□□ 0.94
LYRM9A8MSI8 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LYRM9A8MSI8 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LYRM9A8MSI8 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LYRM9A8MSI8 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LYRM9A8MSI8 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC20.8■□□□□ 0.92
LYRM9A8MSI8 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LYRM9A8MSI8 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
LYRM9A8MSI8 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
LYRM9A8MSI8 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LYRM9A8MSI8 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
LYRM9A8MSI8 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.74■□□□□ 0.91
LYRM9A8MSI8 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LYRM9A8MSI8 AC145285.7-201ENST00000614819 1539 ntBASIC20.71■□□□□ 0.91
LYRM9A8MSI8 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LYRM9A8MSI8 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LYRM9A8MSI8 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.69■□□□□ 0.9
LYRM9A8MSI8 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC20.68■□□□□ 0.9
LYRM9A8MSI8 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LYRM9A8MSI8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC20.64■□□□□ 0.89
LYRM9A8MSI8 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LYRM9A8MSI8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
LYRM9A8MSI8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms