Protein–RNA interactions for Protein: A6NJR5

Putative speedy protein-like protein 3, humanhuman

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A6NJR5 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
A6NJR5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
A6NJR5 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.68■■■□□ 2.5
A6NJR5 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
A6NJR5 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.67■■■□□ 2.5
A6NJR5 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
A6NJR5 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
A6NJR5 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.67■■■□□ 2.5
A6NJR5 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
A6NJR5 MIR7108-201ENST00000614319 87 ntBASIC30.61■■■□□ 2.49
A6NJR5 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.61■■■□□ 2.49
A6NJR5 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
A6NJR5 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
A6NJR5 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.59■■■□□ 2.49
A6NJR5 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
A6NJR5 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
A6NJR5 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
A6NJR5 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
A6NJR5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.55■■■□□ 2.48
A6NJR5 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
A6NJR5 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
A6NJR5 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
A6NJR5 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.52■■■□□ 2.48
A6NJR5 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
A6NJR5 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
A6NJR5 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.51■■■□□ 2.47
A6NJR5 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
A6NJR5 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.5■■■□□ 2.47
A6NJR5 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC30.5■■■□□ 2.47
A6NJR5 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.5■■■□□ 2.47
A6NJR5 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
A6NJR5 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
A6NJR5 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
A6NJR5 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
A6NJR5 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
A6NJR5 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
A6NJR5 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.46■■■□□ 2.47
A6NJR5 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
A6NJR5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.44■■■□□ 2.46
A6NJR5 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.44■■■□□ 2.46
A6NJR5 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
A6NJR5 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
A6NJR5 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
A6NJR5 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.43■■■□□ 2.46
A6NJR5 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.43■■■□□ 2.46
A6NJR5 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
A6NJR5 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.42■■■□□ 2.46
A6NJR5 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
A6NJR5 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
A6NJR5 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
A6NJR5 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
A6NJR5 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.39■■■□□ 2.46
A6NJR5 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
A6NJR5 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC30.39■■■□□ 2.46
A6NJR5 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.38■■■□□ 2.45
A6NJR5 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
A6NJR5 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
A6NJR5 ZNRF2P2-203ENST00000454624 420 ntBASIC30.37■■■□□ 2.45
A6NJR5 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.37■■■□□ 2.45
A6NJR5 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
A6NJR5 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
A6NJR5 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.34■■■□□ 2.45
A6NJR5 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.33■■■□□ 2.45
A6NJR5 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.33■■■□□ 2.45
A6NJR5 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.32■■■□□ 2.44
A6NJR5 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
A6NJR5 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
A6NJR5 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.3■■■□□ 2.44
A6NJR5 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
A6NJR5 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
A6NJR5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
A6NJR5 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
A6NJR5 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.28■■■□□ 2.44
A6NJR5 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
A6NJR5 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.27■■■□□ 2.44
A6NJR5 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.27■■■□□ 2.44
A6NJR5 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
A6NJR5 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.25■■■□□ 2.43
A6NJR5 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.25■■■□□ 2.43
A6NJR5 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
A6NJR5 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.24■■■□□ 2.43
A6NJR5 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.23■■■□□ 2.43
A6NJR5 DUX4L29-201ENST00000425409 679 ntBASIC30.23■■■□□ 2.43
A6NJR5 HLA-V-202ENST00000446817 847 ntBASIC30.23■■■□□ 2.43
A6NJR5 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
A6NJR5 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
A6NJR5 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
A6NJR5 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.22■■■□□ 2.43
A6NJR5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
A6NJR5 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.22■■■□□ 2.43
A6NJR5 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
A6NJR5 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
A6NJR5 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.21■■■□□ 2.43
A6NJR5 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
A6NJR5 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
A6NJR5 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
A6NJR5 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.18■■■□□ 2.42
A6NJR5 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
A6NJR5 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
A6NJR5 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms