Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
A0A1W2PRF3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
A0A1W2PRF3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC22.18■■□□□ 1.14
A0A1W2PRF3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
A0A1W2PRF3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
A0A1W2PRF3 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
A0A1W2PRF3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
A0A1W2PRF3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
A0A1W2PRF3 WASH5P-204ENST00000632292 975 ntBASIC22.16■■□□□ 1.14
A0A1W2PRF3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
A0A1W2PRF3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
A0A1W2PRF3 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
A0A1W2PRF3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC22.14■■□□□ 1.13
A0A1W2PRF3 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
A0A1W2PRF3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
A0A1W2PRF3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC22.13■■□□□ 1.13
A0A1W2PRF3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
A0A1W2PRF3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
A0A1W2PRF3 AC120057.4-201ENST00000624722 1615 ntBASIC22.12■■□□□ 1.13
A0A1W2PRF3 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
A0A1W2PRF3 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.11■■□□□ 1.13
A0A1W2PRF3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
A0A1W2PRF3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
A0A1W2PRF3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
A0A1W2PRF3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
A0A1W2PRF3 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
A0A1W2PRF3 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
A0A1W2PRF3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
A0A1W2PRF3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
A0A1W2PRF3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC22.08■■□□□ 1.13
A0A1W2PRF3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.08■■□□□ 1.12
A0A1W2PRF3 RPS2P35-201ENST00000443417 897 ntBASIC22.07■■□□□ 1.12
A0A1W2PRF3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
A0A1W2PRF3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
A0A1W2PRF3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
A0A1W2PRF3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
A0A1W2PRF3 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.04■■□□□ 1.12
A0A1W2PRF3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.03■■□□□ 1.12
A0A1W2PRF3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
A0A1W2PRF3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
A0A1W2PRF3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
A0A1W2PRF3 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
A0A1W2PRF3 MIR762-201ENST00000390236 83 ntBASIC22■■□□□ 1.11
A0A1W2PRF3 AL162393.1-201ENST00000437852 946 ntBASIC21.99■■□□□ 1.11
A0A1W2PRF3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.97■■□□□ 1.11
A0A1W2PRF3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.97■■□□□ 1.11
A0A1W2PRF3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
A0A1W2PRF3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.96■■□□□ 1.11
A0A1W2PRF3 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
A0A1W2PRF3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
A0A1W2PRF3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
A0A1W2PRF3 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.95■■□□□ 1.1
A0A1W2PRF3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.94■■□□□ 1.1
A0A1W2PRF3 AP006261.1-201ENST00000584783 668 ntBASIC21.94■■□□□ 1.1
A0A1W2PRF3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
A0A1W2PRF3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
A0A1W2PRF3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
A0A1W2PRF3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.93■■□□□ 1.1
A0A1W2PRF3 AC005559.1-201ENST00000589661 871 ntBASIC21.93■■□□□ 1.1
A0A1W2PRF3 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC21.92■■□□□ 1.1
A0A1W2PRF3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
A0A1W2PRF3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
A0A1W2PRF3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
A0A1W2PRF3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
A0A1W2PRF3 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
A0A1W2PRF3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
A0A1W2PRF3 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
A0A1W2PRF3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
A0A1W2PRF3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
A0A1W2PRF3 DUX4L28-201ENST00000623687 678 ntBASIC21.9■■□□□ 1.1
A0A1W2PRF3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
A0A1W2PRF3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
A0A1W2PRF3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
A0A1W2PRF3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
A0A1W2PRF3 MIR3665-201ENST00000578708 105 ntBASIC21.89■■□□□ 1.09
A0A1W2PRF3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
A0A1W2PRF3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
A0A1W2PRF3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
A0A1W2PRF3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.88■■□□□ 1.09
A0A1W2PRF3 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
A0A1W2PRF3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
A0A1W2PRF3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
A0A1W2PRF3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
A0A1W2PRF3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
A0A1W2PRF3 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
A0A1W2PRF3 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
A0A1W2PRF3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.86■■□□□ 1.09
A0A1W2PRF3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
A0A1W2PRF3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.85■■□□□ 1.09
A0A1W2PRF3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
A0A1W2PRF3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
A0A1W2PRF3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
A0A1W2PRF3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
A0A1W2PRF3 AL161658.1-201ENST00000623641 1967 ntBASIC21.83■■□□□ 1.09
A0A1W2PRF3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
A0A1W2PRF3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
A0A1W2PRF3 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
A0A1W2PRF3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.82■■□□□ 1.08
A0A1W2PRF3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
A0A1W2PRF3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms