Protein–RNA interactions for Protein: A0A1B0GVZ6

MBD3L2B, Methyl-CpG-binding domain protein 3-like 2B, humanhuman

Predicted RBP Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L2BA0A1B0GVZ6 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC23.62■■□□□ 1.37
MBD3L2BA0A1B0GVZ6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
MBD3L2BA0A1B0GVZ6 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC23.62■■□□□ 1.37
MBD3L2BA0A1B0GVZ6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.59■■□□□ 1.37
MBD3L2BA0A1B0GVZ6 AC044849.2-201ENST00000606596 710 ntBASIC23.59■■□□□ 1.37
MBD3L2BA0A1B0GVZ6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
MBD3L2BA0A1B0GVZ6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
MBD3L2BA0A1B0GVZ6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.36
MBD3L2BA0A1B0GVZ6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
MBD3L2BA0A1B0GVZ6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
MBD3L2BA0A1B0GVZ6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
MBD3L2BA0A1B0GVZ6 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.54■■□□□ 1.36
MBD3L2BA0A1B0GVZ6 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MBD3L2BA0A1B0GVZ6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.52■■□□□ 1.36
MBD3L2BA0A1B0GVZ6 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC23.52■■□□□ 1.36
MBD3L2BA0A1B0GVZ6 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
MBD3L2BA0A1B0GVZ6 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
MBD3L2BA0A1B0GVZ6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC23.49■■□□□ 1.35
MBD3L2BA0A1B0GVZ6 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
MBD3L2BA0A1B0GVZ6 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.49■■□□□ 1.35
MBD3L2BA0A1B0GVZ6 ABHD17AP4-201ENST00000411545 909 ntBASIC23.49■■□□□ 1.35
MBD3L2BA0A1B0GVZ6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.49■■□□□ 1.35
MBD3L2BA0A1B0GVZ6 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
MBD3L2BA0A1B0GVZ6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
MBD3L2BA0A1B0GVZ6 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC23.48■■□□□ 1.35
MBD3L2BA0A1B0GVZ6 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
MBD3L2BA0A1B0GVZ6 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
MBD3L2BA0A1B0GVZ6 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
MBD3L2BA0A1B0GVZ6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
MBD3L2BA0A1B0GVZ6 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
MBD3L2BA0A1B0GVZ6 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
MBD3L2BA0A1B0GVZ6 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
MBD3L2BA0A1B0GVZ6 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC23.45■■□□□ 1.35
MBD3L2BA0A1B0GVZ6 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
MBD3L2BA0A1B0GVZ6 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
MBD3L2BA0A1B0GVZ6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
MBD3L2BA0A1B0GVZ6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.45■■□□□ 1.34
MBD3L2BA0A1B0GVZ6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.45■■□□□ 1.34
MBD3L2BA0A1B0GVZ6 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
MBD3L2BA0A1B0GVZ6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
MBD3L2BA0A1B0GVZ6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
MBD3L2BA0A1B0GVZ6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
MBD3L2BA0A1B0GVZ6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
MBD3L2BA0A1B0GVZ6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
MBD3L2BA0A1B0GVZ6 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
MBD3L2BA0A1B0GVZ6 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC23.43■■□□□ 1.34
MBD3L2BA0A1B0GVZ6 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
MBD3L2BA0A1B0GVZ6 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
MBD3L2BA0A1B0GVZ6 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
MBD3L2BA0A1B0GVZ6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
MBD3L2BA0A1B0GVZ6 MIR7108-201ENST00000614319 87 ntBASIC23.42■■□□□ 1.34
MBD3L2BA0A1B0GVZ6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
MBD3L2BA0A1B0GVZ6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
MBD3L2BA0A1B0GVZ6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
MBD3L2BA0A1B0GVZ6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.41■■□□□ 1.34
MBD3L2BA0A1B0GVZ6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
MBD3L2BA0A1B0GVZ6 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
MBD3L2BA0A1B0GVZ6 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
MBD3L2BA0A1B0GVZ6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.38■■□□□ 1.33
MBD3L2BA0A1B0GVZ6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
MBD3L2BA0A1B0GVZ6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
MBD3L2BA0A1B0GVZ6 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MBD3L2BA0A1B0GVZ6 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MBD3L2BA0A1B0GVZ6 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.36■■□□□ 1.33
MBD3L2BA0A1B0GVZ6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.35■■□□□ 1.33
MBD3L2BA0A1B0GVZ6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.35■■□□□ 1.33
MBD3L2BA0A1B0GVZ6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.35■■□□□ 1.33
MBD3L2BA0A1B0GVZ6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.35■■□□□ 1.33
MBD3L2BA0A1B0GVZ6 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
MBD3L2BA0A1B0GVZ6 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
MBD3L2BA0A1B0GVZ6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.33■■□□□ 1.33
MBD3L2BA0A1B0GVZ6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
MBD3L2BA0A1B0GVZ6 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
MBD3L2BA0A1B0GVZ6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
MBD3L2BA0A1B0GVZ6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.32■■□□□ 1.32
MBD3L2BA0A1B0GVZ6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
MBD3L2BA0A1B0GVZ6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.31■■□□□ 1.32
MBD3L2BA0A1B0GVZ6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.3■■□□□ 1.32
MBD3L2BA0A1B0GVZ6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
MBD3L2BA0A1B0GVZ6 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
MBD3L2BA0A1B0GVZ6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.28■■□□□ 1.32
MBD3L2BA0A1B0GVZ6 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MBD3L2BA0A1B0GVZ6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.28■■□□□ 1.32
MBD3L2BA0A1B0GVZ6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MBD3L2BA0A1B0GVZ6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MBD3L2BA0A1B0GVZ6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
MBD3L2BA0A1B0GVZ6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.27■■□□□ 1.32
MBD3L2BA0A1B0GVZ6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.27■■□□□ 1.32
MBD3L2BA0A1B0GVZ6 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.26■■□□□ 1.31
MBD3L2BA0A1B0GVZ6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
MBD3L2BA0A1B0GVZ6 ZNRF2P2-203ENST00000454624 420 ntBASIC23.25■■□□□ 1.31
MBD3L2BA0A1B0GVZ6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.25■■□□□ 1.31
MBD3L2BA0A1B0GVZ6 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
MBD3L2BA0A1B0GVZ6 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
MBD3L2BA0A1B0GVZ6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.22■■□□□ 1.31
MBD3L2BA0A1B0GVZ6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MBD3L2BA0A1B0GVZ6 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
MBD3L2BA0A1B0GVZ6 DUX4L29-201ENST00000425409 679 ntBASIC23.21■■□□□ 1.31
MBD3L2BA0A1B0GVZ6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.21■■□□□ 1.31
MBD3L2BA0A1B0GVZ6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms