Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TRBV10-1A0A0K0K1A3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.13■□□□□ 0.65
TRBV10-1A0A0K0K1A3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV10-1A0A0K0K1A3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRBV10-1A0A0K0K1A3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRBV10-1A0A0K0K1A3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
TRBV10-1A0A0K0K1A3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
TRBV10-1A0A0K0K1A3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRBV10-1A0A0K0K1A3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.11■□□□□ 0.65
TRBV10-1A0A0K0K1A3 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV10-1A0A0K0K1A3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV10-1A0A0K0K1A3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TRBV10-1A0A0K0K1A3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV10-1A0A0K0K1A3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV10-1A0A0K0K1A3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.07■□□□□ 0.64
TRBV10-1A0A0K0K1A3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV10-1A0A0K0K1A3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV10-1A0A0K0K1A3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV10-1A0A0K0K1A3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TRBV10-1A0A0K0K1A3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV10-1A0A0K0K1A3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV10-1A0A0K0K1A3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV10-1A0A0K0K1A3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.04■□□□□ 0.64
TRBV10-1A0A0K0K1A3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV10-1A0A0K0K1A3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV10-1A0A0K0K1A3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV10-1A0A0K0K1A3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV10-1A0A0K0K1A3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
TRBV10-1A0A0K0K1A3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV10-1A0A0K0K1A3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV10-1A0A0K0K1A3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV10-1A0A0K0K1A3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.02■□□□□ 0.64
TRBV10-1A0A0K0K1A3 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV10-1A0A0K0K1A3 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV10-1A0A0K0K1A3 ABCB10P1-201ENST00000614297 2181 ntBASIC19.02■□□□□ 0.63
TRBV10-1A0A0K0K1A3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV10-1A0A0K0K1A3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV10-1A0A0K0K1A3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV10-1A0A0K0K1A3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRBV10-1A0A0K0K1A3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19■□□□□ 0.63
TRBV10-1A0A0K0K1A3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TRBV10-1A0A0K0K1A3 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV10-1A0A0K0K1A3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRBV10-1A0A0K0K1A3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
TRBV10-1A0A0K0K1A3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRBV10-1A0A0K0K1A3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRBV10-1A0A0K0K1A3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TRBV10-1A0A0K0K1A3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TRBV10-1A0A0K0K1A3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC18.97■□□□□ 0.63
TRBV10-1A0A0K0K1A3 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV10-1A0A0K0K1A3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV10-1A0A0K0K1A3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.96■□□□□ 0.63
TRBV10-1A0A0K0K1A3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TRBV10-1A0A0K0K1A3 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV10-1A0A0K0K1A3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV10-1A0A0K0K1A3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRBV10-1A0A0K0K1A3 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRBV10-1A0A0K0K1A3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRBV10-1A0A0K0K1A3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV10-1A0A0K0K1A3 AL161658.1-201ENST00000623641 1967 ntBASIC18.94■□□□□ 0.62
TRBV10-1A0A0K0K1A3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC18.94■□□□□ 0.62
TRBV10-1A0A0K0K1A3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRBV10-1A0A0K0K1A3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV10-1A0A0K0K1A3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC18.93■□□□□ 0.62
TRBV10-1A0A0K0K1A3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC18.93■□□□□ 0.62
TRBV10-1A0A0K0K1A3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV10-1A0A0K0K1A3 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV10-1A0A0K0K1A3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV10-1A0A0K0K1A3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV10-1A0A0K0K1A3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV10-1A0A0K0K1A3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
TRBV10-1A0A0K0K1A3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV10-1A0A0K0K1A3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV10-1A0A0K0K1A3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV10-1A0A0K0K1A3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV10-1A0A0K0K1A3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
TRBV10-1A0A0K0K1A3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV10-1A0A0K0K1A3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC18.9■□□□□ 0.62
TRBV10-1A0A0K0K1A3 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV10-1A0A0K0K1A3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV10-1A0A0K0K1A3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.88■□□□□ 0.61
TRBV10-1A0A0K0K1A3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV10-1A0A0K0K1A3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV10-1A0A0K0K1A3 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV10-1A0A0K0K1A3 ST7-AS1-201ENST00000456775 1889 ntBASIC18.87■□□□□ 0.61
TRBV10-1A0A0K0K1A3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.87■□□□□ 0.61
TRBV10-1A0A0K0K1A3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.86■□□□□ 0.61
TRBV10-1A0A0K0K1A3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV10-1A0A0K0K1A3 ABCB10P3-201ENST00000561950 2166 ntBASIC18.86■□□□□ 0.61
TRBV10-1A0A0K0K1A3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.86■□□□□ 0.61
TRBV10-1A0A0K0K1A3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TRBV10-1A0A0K0K1A3 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV10-1A0A0K0K1A3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV10-1A0A0K0K1A3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV10-1A0A0K0K1A3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV10-1A0A0K0K1A3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
TRBV10-1A0A0K0K1A3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.85■□□□□ 0.61
TRBV10-1A0A0K0K1A3 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV10-1A0A0K0K1A3 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV10-1A0A0K0K1A3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms