Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
IGKV1D-43A0A0B4J1Z2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC24.13■■□□□ 1.45
IGKV1D-43A0A0B4J1Z2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
IGKV1D-43A0A0B4J1Z2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
IGKV1D-43A0A0B4J1Z2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC24.11■■□□□ 1.45
IGKV1D-43A0A0B4J1Z2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.11■■□□□ 1.45
IGKV1D-43A0A0B4J1Z2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
IGKV1D-43A0A0B4J1Z2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
IGKV1D-43A0A0B4J1Z2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.09■■□□□ 1.45
IGKV1D-43A0A0B4J1Z2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
IGKV1D-43A0A0B4J1Z2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC24.07■■□□□ 1.44
IGKV1D-43A0A0B4J1Z2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.07■■□□□ 1.44
IGKV1D-43A0A0B4J1Z2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.04■■□□□ 1.44
IGKV1D-43A0A0B4J1Z2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.04■■□□□ 1.44
IGKV1D-43A0A0B4J1Z2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
IGKV1D-43A0A0B4J1Z2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC24.03■■□□□ 1.44
IGKV1D-43A0A0B4J1Z2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
IGKV1D-43A0A0B4J1Z2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
IGKV1D-43A0A0B4J1Z2 AL133380.1-201ENST00000506013 324 ntBASIC23.98■■□□□ 1.43
IGKV1D-43A0A0B4J1Z2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
IGKV1D-43A0A0B4J1Z2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
IGKV1D-43A0A0B4J1Z2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
IGKV1D-43A0A0B4J1Z2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
IGKV1D-43A0A0B4J1Z2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
IGKV1D-43A0A0B4J1Z2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
IGKV1D-43A0A0B4J1Z2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC23.95■■□□□ 1.42
IGKV1D-43A0A0B4J1Z2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.95■■□□□ 1.42
IGKV1D-43A0A0B4J1Z2 AL161658.1-201ENST00000623641 1967 ntBASIC23.93■■□□□ 1.42
IGKV1D-43A0A0B4J1Z2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.93■■□□□ 1.42
IGKV1D-43A0A0B4J1Z2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
IGKV1D-43A0A0B4J1Z2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.92■■□□□ 1.42
IGKV1D-43A0A0B4J1Z2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
IGKV1D-43A0A0B4J1Z2 RARRES2P7-201ENST00000567349 469 ntBASIC23.91■■□□□ 1.42
IGKV1D-43A0A0B4J1Z2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.91■■□□□ 1.42
IGKV1D-43A0A0B4J1Z2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
IGKV1D-43A0A0B4J1Z2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC23.9■■□□□ 1.42
IGKV1D-43A0A0B4J1Z2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
IGKV1D-43A0A0B4J1Z2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
IGKV1D-43A0A0B4J1Z2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
IGKV1D-43A0A0B4J1Z2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
IGKV1D-43A0A0B4J1Z2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.87■■□□□ 1.41
IGKV1D-43A0A0B4J1Z2 ABCB10P1-201ENST00000614297 2181 ntBASIC23.87■■□□□ 1.41
IGKV1D-43A0A0B4J1Z2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
IGKV1D-43A0A0B4J1Z2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
IGKV1D-43A0A0B4J1Z2 SETD8P1-201ENST00000623146 1180 ntBASIC23.86■■□□□ 1.41
IGKV1D-43A0A0B4J1Z2 WASH5P-204ENST00000632292 975 ntBASIC23.86■■□□□ 1.41
IGKV1D-43A0A0B4J1Z2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
IGKV1D-43A0A0B4J1Z2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC23.85■■□□□ 1.41
IGKV1D-43A0A0B4J1Z2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
IGKV1D-43A0A0B4J1Z2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
IGKV1D-43A0A0B4J1Z2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.84■■□□□ 1.41
IGKV1D-43A0A0B4J1Z2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
IGKV1D-43A0A0B4J1Z2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
IGKV1D-43A0A0B4J1Z2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
IGKV1D-43A0A0B4J1Z2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
IGKV1D-43A0A0B4J1Z2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
IGKV1D-43A0A0B4J1Z2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
IGKV1D-43A0A0B4J1Z2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
IGKV1D-43A0A0B4J1Z2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
IGKV1D-43A0A0B4J1Z2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
IGKV1D-43A0A0B4J1Z2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
IGKV1D-43A0A0B4J1Z2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
IGKV1D-43A0A0B4J1Z2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.77■■□□□ 1.4
IGKV1D-43A0A0B4J1Z2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
IGKV1D-43A0A0B4J1Z2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
IGKV1D-43A0A0B4J1Z2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
IGKV1D-43A0A0B4J1Z2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
IGKV1D-43A0A0B4J1Z2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
IGKV1D-43A0A0B4J1Z2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
IGKV1D-43A0A0B4J1Z2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC23.74■■□□□ 1.39
IGKV1D-43A0A0B4J1Z2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
IGKV1D-43A0A0B4J1Z2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.74■■□□□ 1.39
IGKV1D-43A0A0B4J1Z2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
IGKV1D-43A0A0B4J1Z2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
IGKV1D-43A0A0B4J1Z2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC23.72■■□□□ 1.39
IGKV1D-43A0A0B4J1Z2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
IGKV1D-43A0A0B4J1Z2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
IGKV1D-43A0A0B4J1Z2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
IGKV1D-43A0A0B4J1Z2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
IGKV1D-43A0A0B4J1Z2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
IGKV1D-43A0A0B4J1Z2 AC136428.2-201ENST00000563187 214 ntBASIC23.69■■□□□ 1.38
IGKV1D-43A0A0B4J1Z2 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
IGKV1D-43A0A0B4J1Z2 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC23.68■■□□□ 1.38
IGKV1D-43A0A0B4J1Z2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
IGKV1D-43A0A0B4J1Z2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
IGKV1D-43A0A0B4J1Z2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
IGKV1D-43A0A0B4J1Z2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
IGKV1D-43A0A0B4J1Z2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
IGKV1D-43A0A0B4J1Z2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
IGKV1D-43A0A0B4J1Z2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC23.67■■□□□ 1.38
IGKV1D-43A0A0B4J1Z2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
IGKV1D-43A0A0B4J1Z2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
IGKV1D-43A0A0B4J1Z2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
IGKV1D-43A0A0B4J1Z2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
IGKV1D-43A0A0B4J1Z2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
IGKV1D-43A0A0B4J1Z2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
IGKV1D-43A0A0B4J1Z2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
IGKV1D-43A0A0B4J1Z2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
IGKV1D-43A0A0B4J1Z2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
IGKV1D-43A0A0B4J1Z2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms