Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
IGKV1D-43A0A0B4J1Z2 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
IGKV1D-43A0A0B4J1Z2 AL356512.1-201ENST00000607453 1739 ntBASIC29.45■■■□□ 2.3
IGKV1D-43A0A0B4J1Z2 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
IGKV1D-43A0A0B4J1Z2 HES6-203ENST00000409160 1600 ntTSL 2 BASIC29.14■■■□□ 2.26
IGKV1D-43A0A0B4J1Z2 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
IGKV1D-43A0A0B4J1Z2 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC29.05■■■□□ 2.24
IGKV1D-43A0A0B4J1Z2 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
IGKV1D-43A0A0B4J1Z2 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC28.94■■■□□ 2.22
IGKV1D-43A0A0B4J1Z2 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC28.62■■■□□ 2.17
IGKV1D-43A0A0B4J1Z2 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC28.6■■■□□ 2.17
IGKV1D-43A0A0B4J1Z2 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC28.46■■■□□ 2.15
IGKV1D-43A0A0B4J1Z2 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
IGKV1D-43A0A0B4J1Z2 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
IGKV1D-43A0A0B4J1Z2 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC28.08■■■□□ 2.08
IGKV1D-43A0A0B4J1Z2 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC27.87■■■□□ 2.05
IGKV1D-43A0A0B4J1Z2 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC27.86■■■□□ 2.05
IGKV1D-43A0A0B4J1Z2 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
IGKV1D-43A0A0B4J1Z2 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
IGKV1D-43A0A0B4J1Z2 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC27.78■■■□□ 2.04
IGKV1D-43A0A0B4J1Z2 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC27.71■■■□□ 2.03
IGKV1D-43A0A0B4J1Z2 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
IGKV1D-43A0A0B4J1Z2 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
IGKV1D-43A0A0B4J1Z2 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
IGKV1D-43A0A0B4J1Z2 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
IGKV1D-43A0A0B4J1Z2 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC27.48■■□□□ 1.99
IGKV1D-43A0A0B4J1Z2 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
IGKV1D-43A0A0B4J1Z2 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
IGKV1D-43A0A0B4J1Z2 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
IGKV1D-43A0A0B4J1Z2 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
IGKV1D-43A0A0B4J1Z2 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
IGKV1D-43A0A0B4J1Z2 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
IGKV1D-43A0A0B4J1Z2 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC27.22■■□□□ 1.95
IGKV1D-43A0A0B4J1Z2 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
IGKV1D-43A0A0B4J1Z2 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC27.17■■□□□ 1.94
IGKV1D-43A0A0B4J1Z2 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC27.05■■□□□ 1.92
IGKV1D-43A0A0B4J1Z2 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
IGKV1D-43A0A0B4J1Z2 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
IGKV1D-43A0A0B4J1Z2 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
IGKV1D-43A0A0B4J1Z2 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
IGKV1D-43A0A0B4J1Z2 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC26.88■■□□□ 1.89
IGKV1D-43A0A0B4J1Z2 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
IGKV1D-43A0A0B4J1Z2 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC26.68■■□□□ 1.86
IGKV1D-43A0A0B4J1Z2 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC26.66■■□□□ 1.86
IGKV1D-43A0A0B4J1Z2 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
IGKV1D-43A0A0B4J1Z2 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
IGKV1D-43A0A0B4J1Z2 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
IGKV1D-43A0A0B4J1Z2 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
IGKV1D-43A0A0B4J1Z2 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
IGKV1D-43A0A0B4J1Z2 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
IGKV1D-43A0A0B4J1Z2 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
IGKV1D-43A0A0B4J1Z2 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
IGKV1D-43A0A0B4J1Z2 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
IGKV1D-43A0A0B4J1Z2 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.47■■□□□ 1.83
IGKV1D-43A0A0B4J1Z2 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
IGKV1D-43A0A0B4J1Z2 INO80B-203ENST00000409917 796 ntTSL 2 BASIC26.43■■□□□ 1.82
IGKV1D-43A0A0B4J1Z2 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
IGKV1D-43A0A0B4J1Z2 ILK-212ENST00000532063 1617 ntTSL 2 BASIC26.4■■□□□ 1.82
IGKV1D-43A0A0B4J1Z2 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC26.4■■□□□ 1.82
IGKV1D-43A0A0B4J1Z2 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
IGKV1D-43A0A0B4J1Z2 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
IGKV1D-43A0A0B4J1Z2 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
IGKV1D-43A0A0B4J1Z2 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
IGKV1D-43A0A0B4J1Z2 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
IGKV1D-43A0A0B4J1Z2 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
IGKV1D-43A0A0B4J1Z2 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
IGKV1D-43A0A0B4J1Z2 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.21■■□□□ 1.79
IGKV1D-43A0A0B4J1Z2 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
IGKV1D-43A0A0B4J1Z2 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
IGKV1D-43A0A0B4J1Z2 AC015813.7-201ENST00000623294 581 ntBASIC26.14■■□□□ 1.78
IGKV1D-43A0A0B4J1Z2 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
IGKV1D-43A0A0B4J1Z2 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
IGKV1D-43A0A0B4J1Z2 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
IGKV1D-43A0A0B4J1Z2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
IGKV1D-43A0A0B4J1Z2 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
IGKV1D-43A0A0B4J1Z2 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC26■■□□□ 1.75
IGKV1D-43A0A0B4J1Z2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
IGKV1D-43A0A0B4J1Z2 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC25.93■■□□□ 1.74
IGKV1D-43A0A0B4J1Z2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
IGKV1D-43A0A0B4J1Z2 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
IGKV1D-43A0A0B4J1Z2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
IGKV1D-43A0A0B4J1Z2 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
IGKV1D-43A0A0B4J1Z2 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
IGKV1D-43A0A0B4J1Z2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
IGKV1D-43A0A0B4J1Z2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC25.77■■□□□ 1.72
IGKV1D-43A0A0B4J1Z2 AC145285.7-201ENST00000614819 1539 ntBASIC25.76■■□□□ 1.71
IGKV1D-43A0A0B4J1Z2 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
IGKV1D-43A0A0B4J1Z2 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC25.73■■□□□ 1.71
IGKV1D-43A0A0B4J1Z2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
IGKV1D-43A0A0B4J1Z2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
IGKV1D-43A0A0B4J1Z2 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
IGKV1D-43A0A0B4J1Z2 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
IGKV1D-43A0A0B4J1Z2 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
IGKV1D-43A0A0B4J1Z2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC25.64■■□□□ 1.69
IGKV1D-43A0A0B4J1Z2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
IGKV1D-43A0A0B4J1Z2 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC25.62■■□□□ 1.69
IGKV1D-43A0A0B4J1Z2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
IGKV1D-43A0A0B4J1Z2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
IGKV1D-43A0A0B4J1Z2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
IGKV1D-43A0A0B4J1Z2 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms