Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TTC9Q92623 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TTC9Q92623 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TTC9Q92623 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.63■□□□□ 0.89
TTC9Q92623 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TTC9Q92623 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC9Q92623 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC9Q92623 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.62■□□□□ 0.89
TTC9Q92623 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.62■□□□□ 0.89
TTC9Q92623 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TTC9Q92623 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TTC9Q92623 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC9Q92623 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TTC9Q92623 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.62■□□□□ 0.89
TTC9Q92623 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TTC9Q92623 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.62■□□□□ 0.89
TTC9Q92623 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.62■□□□□ 0.89
TTC9Q92623 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC9Q92623 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TTC9Q92623 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.61■□□□□ 0.89
TTC9Q92623 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC9Q92623 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TTC9Q92623 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC9Q92623 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.61■□□□□ 0.89
TTC9Q92623 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.61■□□□□ 0.89
TTC9Q92623 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.61■□□□□ 0.89
TTC9Q92623 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TTC9Q92623 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC9Q92623 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TTC9Q92623 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC9Q92623 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC9Q92623 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TTC9Q92623 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC9Q92623 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC9Q92623 AC144652.1-201ENST00000609974 1624 ntBASIC20.6■□□□□ 0.89
TTC9Q92623 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC9Q92623 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TTC9Q92623 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TTC9Q92623 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TTC9Q92623 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TTC9Q92623 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.6■□□□□ 0.89
TTC9Q92623 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TTC9Q92623 KRT18P6-201ENST00000555540 1265 ntBASIC20.6■□□□□ 0.89
TTC9Q92623 DUX4L4-201ENST00000566884 1269 ntBASIC20.6■□□□□ 0.89
TTC9Q92623 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.6■□□□□ 0.89
TTC9Q92623 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC9Q92623 AC011767.1-201ENST00000617410 1153 ntBASIC20.6■□□□□ 0.89
TTC9Q92623 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.6■□□□□ 0.89
TTC9Q92623 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC9Q92623 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC9Q92623 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TTC9Q92623 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC9Q92623 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
TTC9Q92623 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TTC9Q92623 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TTC9Q92623 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TTC9Q92623 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.59■□□□□ 0.89
TTC9Q92623 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TTC9Q92623 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TTC9Q92623 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.59■□□□□ 0.89
TTC9Q92623 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.59■□□□□ 0.89
TTC9Q92623 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TTC9Q92623 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TTC9Q92623 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
TTC9Q92623 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TTC9Q92623 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TTC9Q92623 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TTC9Q92623 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
TTC9Q92623 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TTC9Q92623 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.58■□□□□ 0.89
TTC9Q92623 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TTC9Q92623 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.58■□□□□ 0.89
TTC9Q92623 KRT19P1-201ENST00000405746 1186 ntBASIC20.58■□□□□ 0.89
TTC9Q92623 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TTC9Q92623 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TTC9Q92623 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TTC9Q92623 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.58■□□□□ 0.89
TTC9Q92623 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TTC9Q92623 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TTC9Q92623 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.58■□□□□ 0.88
TTC9Q92623 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC9Q92623 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TTC9Q92623 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC9Q92623 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC9Q92623 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
TTC9Q92623 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC9Q92623 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC9Q92623 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC9Q92623 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TTC9Q92623 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TTC9Q92623 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.57■□□□□ 0.88
TTC9Q92623 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.57■□□□□ 0.88
TTC9Q92623 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.57■□□□□ 0.88
TTC9Q92623 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.57■□□□□ 0.88
TTC9Q92623 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.57■□□□□ 0.88
TTC9Q92623 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.57■□□□□ 0.88
TTC9Q92623 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TTC9Q92623 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TTC9Q92623 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC9Q92623 KRT18P11-201ENST00000435214 1283 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms