RNA–Protein interactions for RNA: ENST00000319449.8

RUFY1-201, Transcript of RUN and FYVE domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUFY1, Length 2,646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY1-201ENST00000319449 NISCHQ9Y2I1 1504 aa43.49■■■■■ 4.55
RUFY1-201ENST00000319449 CCDC180Q9P1Z9 1646 aa37.91■■■■□ 3.66
RUFY1-201ENST00000319449 ABCC9O60706 1549 aa36.47■■■■□ 3.43
RUFY1-201ENST00000319449 ZCCHC6Q5VYS8 1495 aaKnown RBP36.44■■■■□ 3.42
RUFY1-201ENST00000319449 DCAF8L2P0C7V8 631 aa36.38■■■■□ 3.41
RUFY1-201ENST00000319449 DCAF1Q9Y4B6 1507 aa35.78■■■■□ 3.32
RUFY1-201ENST00000319449 HRCP23327 699 aa35.67■■■■□ 3.3
RUFY1-201ENST00000319449 SHROOM4Q9ULL8 1493 aa35.58■■■■□ 3.29
RUFY1-201ENST00000319449 MYO15BQ96JP2 1530 aa35.44■■■■□ 3.26
RUFY1-201ENST00000319449 NACADO15069 1562 aa35.43■■■■□ 3.26
RUFY1-201ENST00000319449 RB1CC1Q8TDY2 1594 aa35.25■■■■□ 3.23
RUFY1-201ENST00000319449 SUPT5HO00267 1087 aaKnown RBP35.11■■■■□ 3.21
RUFY1-201ENST00000319449 SCRIBQ14160 1630 aa35.08■■■■□ 3.21
RUFY1-201ENST00000319449 PELP1Q8IZL8 1130 aaKnown RBP34.91■■■■□ 3.18
RUFY1-201ENST00000319449 PCGF6Q9BYE7 350 aa34.9■■■■□ 3.18
RUFY1-201ENST00000319449 PPARGC1BQ86YN6 1023 aaKnown RBP34.85■■■■□ 3.17
RUFY1-201ENST00000319449 UNC13AQ9UPW8 1703 aa34.61■■■■□ 3.13
RUFY1-201ENST00000319449 CHIC1Q5VXU3 224 aa34.61■■■■□ 3.13
RUFY1-201ENST00000319449 PABPN1Q86U42 306 aaKnown RBP eCLIP34.43■■■■□ 3.1
RUFY1-201ENST00000319449 BICRAQ9NZM4 1560 aa34.28■■■■□ 3.08
RUFY1-201ENST00000319449 CECR2Q9BXF3 1484 aa33.97■■■■□ 3.03
RUFY1-201ENST00000319449 TRIM26Q12899 539 aaPredicted RBP33.83■■■■□ 3.01
RUFY1-201ENST00000319449 MYT1Q01538 1121 aa33.82■■■■□ 3
RUFY1-201ENST00000319449 LOC105371045A0A1W2PR82 267 aa33.75■■■□□ 2.99
RUFY1-201ENST00000319449 SCAF1Q9H7N4 1312 aaKnown RBP33.7■■■□□ 2.99
RUFY1-201ENST00000319449 MROH2BQ7Z745 1585 aa33.68■■■□□ 2.98
RUFY1-201ENST00000319449 RSF1Q96T23 1441 aaPredicted RBP33.68■■■□□ 2.98
RUFY1-201ENST00000319449 ZEB1P37275 1124 aaPredicted RBP33.59■■■□□ 2.97
RUFY1-201ENST00000319449 BAZ1AQ9NRL2 1556 aaPredicted RBP33.56■■■□□ 2.96
RUFY1-201ENST00000319449 SMARCA4P51532 1647 aa33.49■■■□□ 2.95
RUFY1-201ENST00000319449 WIZO95785 1651 aa33.39■■■□□ 2.94
RUFY1-201ENST00000319449 EIF4G1Q04637 1599 aaKnown RBP33.27■■■□□ 2.92
RUFY1-201ENST00000319449 ATAD2BQ9ULI0 1458 aa33.06■■■□□ 2.88
RUFY1-201ENST00000319449 PEG3Q9GZU2 1588 aa32.99■■■□□ 2.87
RUFY1-201ENST00000319449 SMARCA2P51531 1590 aa32.93■■■□□ 2.86
RUFY1-201ENST00000319449 ACIN1Q9UKV3 1341 aaKnown RBP32.91■■■□□ 2.86
RUFY1-201ENST00000319449 TOP2AP11388 1531 aaKnown RBP32.91■■■□□ 2.86
RUFY1-201ENST00000319449 CC2D2AQ9P2K1 1620 aa32.89■■■□□ 2.86
RUFY1-201ENST00000319449 BAZ1BQ9UIG0 1483 aaKnown RBP32.86■■■□□ 2.85
RUFY1-201ENST00000319449 NEUROD1Q13562 356 aa32.8■■■□□ 2.84
RUFY1-201ENST00000319449 NCAPD3P42695 1498 aa32.76■■■□□ 2.84
RUFY1-201ENST00000319449 CCDC88BA6NC98 1476 aa32.67■■■□□ 2.82
RUFY1-201ENST00000319449 HMGXB3Q12766 1538 aa32.63■■■□□ 2.81
RUFY1-201ENST00000319449 GTF3C3Q9Y5Q9 886 aa32.62■■■□□ 2.81
RUFY1-201ENST00000319449 DNAJC5BQ9UF47 199 aa32.57■■■□□ 2.8
RUFY1-201ENST00000319449 TRIM41Q8WV44 630 aa32.52■■■□□ 2.8
RUFY1-201ENST00000319449 CENPBP07199 599 aaPredicted RBP32.51■■■□□ 2.8
RUFY1-201ENST00000319449 FAM9AQ8IZU1 332 aaPredicted RBP32.44■■■□□ 2.78
RUFY1-201ENST00000319449 DIEXFQ68CQ4 756 aaKnown RBP32.36■■■□□ 2.77
RUFY1-201ENST00000319449 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.35■■■□□ 2.77
RUFY1-201ENST00000319449 CCER1Q8TC90 406 aaPredicted RBP32.3■■■□□ 2.76
RUFY1-201ENST00000319449 EHMT2Q96KQ7 1210 aa32.25■■■□□ 2.75
RUFY1-201ENST00000319449 CFTRP13569 1480 aa31.98■■■□□ 2.71
RUFY1-201ENST00000319449 ABCC8Q09428 1581 aa31.97■■■□□ 2.71
RUFY1-201ENST00000319449 CADPSQ9ULU8 1353 aa31.96■■■□□ 2.71
RUFY1-201ENST00000319449 TTBK1Q5TCY1 1321 aaPredicted RBP31.94■■■□□ 2.7
RUFY1-201ENST00000319449 NESP48681 1621 aa31.93■■■□□ 2.7
RUFY1-201ENST00000319449 YTHDC1Q96MU7 727 aaKnown RBP31.78■■■□□ 2.68
RUFY1-201ENST00000319449 ZNF316A6NFI3 1004 aaPredicted RBP31.74■■■□□ 2.67
RUFY1-201ENST00000319449 WRNQ14191 1432 aaPredicted RBP eCLIP31.7■■■□□ 2.66
RUFY1-201ENST00000319449 PRDM2Q13029 1718 aa31.68■■■□□ 2.66
RUFY1-201ENST00000319449 LAMC3Q9Y6N6 1575 aa31.67■■■□□ 2.66
RUFY1-201ENST00000319449 FANCD2Q9BXW9 1451 aa31.63■■■□□ 2.65
RUFY1-201ENST00000319449 SYNJ1O43426 1573 aa31.61■■■□□ 2.65
RUFY1-201ENST00000319449 MIER1Q8N108 512 aa31.5■■■□□ 2.63
RUFY1-201ENST00000319449 PDS5BQ9NTI5 1447 aa31.49■■■□□ 2.63
RUFY1-201ENST00000319449 CUX1P39880 1505 aa31.48■■■□□ 2.63
RUFY1-201ENST00000319449 BCL11AQ9H165 835 aa31.46■■■□□ 2.63
RUFY1-201ENST00000319449 KIF21AQ7Z4S6 1674 aa31.43■■■□□ 2.62
RUFY1-201ENST00000319449 CEP164Q9UPV0 1460 aa31.43■■■□□ 2.62
RUFY1-201ENST00000319449 TOP2BQ02880 1626 aa31.41■■■□□ 2.62
RUFY1-201ENST00000319449 BIVM-ERCC5R4GMW8 1640 aa31.35■■■□□ 2.61
RUFY1-201ENST00000319449 SOGA1O94964 1423 aa31.31■■■□□ 2.6
RUFY1-201ENST00000319449 URB2Q14146 1524 aaKnown RBP31.27■■■□□ 2.6
RUFY1-201ENST00000319449 CEP162Q5TB80 1403 aa31.26■■■□□ 2.59
RUFY1-201ENST00000319449 RUSC2Q8N2Y8 1516 aa31.25■■■□□ 2.59
RUFY1-201ENST00000319449 TOPBP1Q92547 1522 aa31.24■■■□□ 2.59
RUFY1-201ENST00000319449 ERCC6Q03468 1493 aa31.24■■■□□ 2.59
RUFY1-201ENST00000319449 DNMBPQ6XZF7 1577 aa31.21■■■□□ 2.59
RUFY1-201ENST00000319449 FGD5Q6ZNL6 1462 aa31.2■■■□□ 2.58
RUFY1-201ENST00000319449 MRC2Q9UBG0 1479 aa31.1■■■□□ 2.57
RUFY1-201ENST00000319449 CLSPNQ9HAW4 1339 aa31.1■■■□□ 2.57
RUFY1-201ENST00000319449 POLA1P09884 1462 aaPredicted RBP31.09■■■□□ 2.57
RUFY1-201ENST00000319449 SUPT16HQ9Y5B9 1047 aaKnown RBP31.08■■■□□ 2.57
RUFY1-201ENST00000319449 RAD54L2Q9Y4B4 1467 aa31.07■■■□□ 2.56
RUFY1-201ENST00000319449 TNIKQ9UKE5 1360 aa31.05■■■□□ 2.56
RUFY1-201ENST00000319449 ANP32EQ9BTT0 268 aa31.01■■■□□ 2.55
RUFY1-201ENST00000319449 CSRNP3Q8WYN3 585 aa30.98■■■□□ 2.55
RUFY1-201ENST00000319449 CUX2O14529 1486 aa30.96■■■□□ 2.55
RUFY1-201ENST00000319449 THOC2Q8NI27 1593 aaKnown RBP30.94■■■□□ 2.54
RUFY1-201ENST00000319449 HNRNPUL2Q1KMD3 747 aaKnown RBP30.93■■■□□ 2.54
RUFY1-201ENST00000319449 TSHZ2Q9NRE2 1034 aa30.93■■■□□ 2.54
RUFY1-201ENST00000319449 WDR62O43379 1518 aa30.92■■■□□ 2.54
RUFY1-201ENST00000319449 EEA1Q15075 1411 aa30.91■■■□□ 2.54
RUFY1-201ENST00000319449 KIF27Q86VH2 1401 aa30.89■■■□□ 2.54
RUFY1-201ENST00000319449 UBTFP17480 764 aaKnown RBP30.84■■■□□ 2.53
RUFY1-201ENST00000319449 ABCA10Q8WWZ4 1543 aa30.83■■■□□ 2.53
RUFY1-201ENST00000319449 TDRD9Q8NDG6 1382 aaKnown RBP30.82■■■□□ 2.53
RUFY1-201ENST00000319449 TARBP1Q13395 1621 aaKnown RBP30.77■■■□□ 2.52
RUFY1-201ENST00000319449 PRKCSHP14314 528 aaPredicted RBP30.75■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms