RNA–Protein interactions for RNA: ENST00000221459.6

LIN7B-201, Transcript of lin-7 homolog B, crumbs cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN7B, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7B-201ENST00000221459 NISCHQ9Y2I1 1504 aa51.99■■■■■ 5.91
LIN7B-201ENST00000221459 CCDC180Q9P1Z9 1646 aa46.43■■■■■ 5.02
LIN7B-201ENST00000221459 ABCC9O60706 1549 aa45.72■■■■■ 4.91
LIN7B-201ENST00000221459 RB1CC1Q8TDY2 1594 aa43.84■■■■■ 4.61
LIN7B-201ENST00000221459 NACADO15069 1562 aa43.71■■■■■ 4.59
LIN7B-201ENST00000221459 DCAF8L2P0C7V8 631 aa43.48■■■■■ 4.55
LIN7B-201ENST00000221459 MYO15BQ96JP2 1530 aa43.33■■■■■ 4.53
LIN7B-201ENST00000221459 ZCCHC6Q5VYS8 1495 aaKnown RBP43.25■■■■■ 4.51
LIN7B-201ENST00000221459 DCAF1Q9Y4B6 1507 aa43.02■■■■■ 4.48
LIN7B-201ENST00000221459 UNC13AQ9UPW8 1703 aa42.89■■■■■ 4.46
LIN7B-201ENST00000221459 PABPN1Q86U42 306 aaKnown RBP eCLIP42.63■■■■■ 4.41
LIN7B-201ENST00000221459 BICRAQ9NZM4 1560 aa42.56■■■■■ 4.4
LIN7B-201ENST00000221459 SCRIBQ14160 1630 aa42.3■■■■■ 4.36
LIN7B-201ENST00000221459 DNAJC5BQ9UF47 199 aa42.28■■■■■ 4.36
LIN7B-201ENST00000221459 SHROOM4Q9ULL8 1493 aa42.08■■■■■ 4.33
LIN7B-201ENST00000221459 EIF4G1Q04637 1599 aaKnown RBP41.45■■■■■ 4.23
LIN7B-201ENST00000221459 CC2D2AQ9P2K1 1620 aa41.37■■■■■ 4.21
LIN7B-201ENST00000221459 CECR2Q9BXF3 1484 aa41.13■■■■■ 4.17
LIN7B-201ENST00000221459 SMARCA4P51532 1647 aa40.44■■■■■ 4.06
LIN7B-201ENST00000221459 NCAPD3P42695 1498 aa40.32■■■■■ 4.05
LIN7B-201ENST00000221459 BAZ1AQ9NRL2 1556 aaPredicted RBP40.31■■■■■ 4.04
LIN7B-201ENST00000221459 ATAD2BQ9ULI0 1458 aa40.29■■■■■ 4.04
LIN7B-201ENST00000221459 SMARCA2P51531 1590 aa40.23■■■■■ 4.03
LIN7B-201ENST00000221459 HMGXB3Q12766 1538 aa40.11■■■■■ 4.01
LIN7B-201ENST00000221459 MROH2BQ7Z745 1585 aa40.06■■■■■ 4
LIN7B-201ENST00000221459 PEG3Q9GZU2 1588 aa40.06■■■■■ 4
LIN7B-201ENST00000221459 BAZ1BQ9UIG0 1483 aaKnown RBP39.94■■■■□ 3.98
LIN7B-201ENST00000221459 WIZO95785 1651 aa39.61■■■■□ 3.93
LIN7B-201ENST00000221459 NESP48681 1621 aa39.47■■■■□ 3.91
LIN7B-201ENST00000221459 RSF1Q96T23 1441 aaPredicted RBP39.45■■■■□ 3.91
LIN7B-201ENST00000221459 ERCC6Q03468 1493 aa39.43■■■■□ 3.9
LIN7B-201ENST00000221459 LAMC3Q9Y6N6 1575 aa39.33■■■■□ 3.89
LIN7B-201ENST00000221459 CUX2O14529 1486 aa39.18■■■■□ 3.86
LIN7B-201ENST00000221459 TOP2AP11388 1531 aaKnown RBP39.18■■■■□ 3.86
LIN7B-201ENST00000221459 CADPSQ9ULU8 1353 aa39.1■■■■□ 3.85
LIN7B-201ENST00000221459 PDS5BQ9NTI5 1447 aa39.05■■■■□ 3.84
LIN7B-201ENST00000221459 DNAJC5Q9H3Z4 198 aa39.03■■■■□ 3.84
LIN7B-201ENST00000221459 KIF21AQ7Z4S6 1674 aa39.03■■■■□ 3.84
LIN7B-201ENST00000221459 THOC2Q8NI27 1593 aaKnown RBP38.99■■■■□ 3.83
LIN7B-201ENST00000221459 CFTRP13569 1480 aa38.82■■■■□ 3.81
LIN7B-201ENST00000221459 MRC2Q9UBG0 1479 aa38.7■■■■□ 3.79
LIN7B-201ENST00000221459 CCDC88BA6NC98 1476 aa38.69■■■■□ 3.78
LIN7B-201ENST00000221459 FANCD2Q9BXW9 1451 aa38.67■■■■□ 3.78
LIN7B-201ENST00000221459 CEP164Q9UPV0 1460 aa38.67■■■■□ 3.78
LIN7B-201ENST00000221459 WDR62O43379 1518 aa38.6■■■■□ 3.77
LIN7B-201ENST00000221459 PRDM2Q13029 1718 aa38.55■■■■□ 3.76
LIN7B-201ENST00000221459 URB2Q14146 1524 aaKnown RBP38.33■■■■□ 3.73
LIN7B-201ENST00000221459 SUPT5HO00267 1087 aaKnown RBP38.1■■■■□ 3.69
LIN7B-201ENST00000221459 TOPBP1Q92547 1522 aa38.02■■■■□ 3.68
LIN7B-201ENST00000221459 ABCC8Q09428 1581 aa37.98■■■■□ 3.67
LIN7B-201ENST00000221459 DNMBPQ6XZF7 1577 aa37.96■■■■□ 3.67
LIN7B-201ENST00000221459 IFT140Q96RY7 1462 aa37.87■■■■□ 3.65
LIN7B-201ENST00000221459 ZNF608Q9ULD9 1512 aaPredicted RBP37.73■■■■□ 3.63
LIN7B-201ENST00000221459 POLA1P09884 1462 aaPredicted RBP37.68■■■■□ 3.62
LIN7B-201ENST00000221459 TARBP1Q13395 1621 aaKnown RBP37.66■■■■□ 3.62
LIN7B-201ENST00000221459 CUX1P39880 1505 aa37.61■■■■□ 3.61
LIN7B-201ENST00000221459 EIF4G3O43432 1585 aaKnown RBP37.6■■■■□ 3.61
LIN7B-201ENST00000221459 FGD5Q6ZNL6 1462 aa37.53■■■■□ 3.6
LIN7B-201ENST00000221459 RAD54L2Q9Y4B4 1467 aa37.51■■■■□ 3.59
LIN7B-201ENST00000221459 SOGA1O94964 1423 aa37.48■■■■□ 3.59
LIN7B-201ENST00000221459 AQRO60306 1485 aaKnown RBP eCLIP37.45■■■■□ 3.595e-7■■■■■ 40.6
LIN7B-201ENST00000221459 OSCARQ8IYS5 282 aa37.42■■■■□ 3.58
LIN7B-201ENST00000221459 TRIM41Q8WV44 630 aa37.35■■■■□ 3.57
LIN7B-201ENST00000221459 WDR97A6NE52 1622 aa37.35■■■■□ 3.57
LIN7B-201ENST00000221459 TDRD9Q8NDG6 1382 aaKnown RBP37.31■■■■□ 3.56
LIN7B-201ENST00000221459 BIVM-ERCC5R4GMW8 1640 aa37.21■■■■□ 3.55
LIN7B-201ENST00000221459 WRNQ14191 1432 aaPredicted RBP eCLIP37.2■■■■□ 3.55
LIN7B-201ENST00000221459 CHD1O14646 1710 aa37.2■■■■□ 3.55
LIN7B-201ENST00000221459 TOP2BQ02880 1626 aa37.19■■■■□ 3.54
LIN7B-201ENST00000221459 SYNJ1O43426 1573 aa37.17■■■■□ 3.54
LIN7B-201ENST00000221459 ABCA10Q8WWZ4 1543 aa37.15■■■■□ 3.54
LIN7B-201ENST00000221459 SNAPC4Q5SXM2 1469 aa37.13■■■■□ 3.53
LIN7B-201ENST00000221459 GRIN2BQ13224 1484 aa37.11■■■■□ 3.53
LIN7B-201ENST00000221459 ABCA5Q8WWZ7 1642 aa37.07■■■■□ 3.53
LIN7B-201ENST00000221459 GAPVD1Q14C86 1478 aa37.07■■■■□ 3.52
LIN7B-201ENST00000221459 MAGI1Q96QZ7 1491 aaPredicted RBP37.07■■■■□ 3.52
LIN7B-201ENST00000221459 PBRM1Q86U86 1689 aa37.05■■■■□ 3.52
LIN7B-201ENST00000221459 FBLN2P98095 1184 aa37.03■■■■□ 3.52
LIN7B-201ENST00000221459 RIMBP3CA6NJZ7 1639 aa36.94■■■■□ 3.5
LIN7B-201ENST00000221459 RIMBP3BA6NNM3 1639 aa36.94■■■■□ 3.5
LIN7B-201ENST00000221459 RIMBP3Q9UFD9 1639 aa36.94■■■■□ 3.5
LIN7B-201ENST00000221459 SYNJ2O15056 1496 aa36.93■■■■□ 3.5
LIN7B-201ENST00000221459 ARHGEF11O15085 1522 aa36.89■■■■□ 3.5
LIN7B-201ENST00000221459 CHMP7Q8WUX9 453 aaPredicted RBP36.88■■■■□ 3.49
LIN7B-201ENST00000221459 CLASP1Q7Z460 1538 aa36.79■■■■□ 3.48
LIN7B-201ENST00000221459 ADAMTS12P58397 1594 aa36.74■■■■□ 3.47
LIN7B-201ENST00000221459 ERICH3Q5RHP9 1530 aa36.7■■■■□ 3.47
LIN7B-201ENST00000221459 GRIN2AQ12879 1464 aa36.64■■■■□ 3.46
LIN7B-201ENST00000221459 FHAD1B1AJZ9 1412 aa36.62■■■■□ 3.45
LIN7B-201ENST00000221459 ARAP1Q96P48 1450 aa36.56■■■■□ 3.44
LIN7B-201ENST00000221459 NUP160Q12769 1436 aa36.51■■■■□ 3.43
LIN7B-201ENST00000221459 CEP170Q5SW79 1584 aa36.5■■■■□ 3.43
LIN7B-201ENST00000221459 CYB5RLQ6IPT4 315 aa36.5■■■■□ 3.43
LIN7B-201ENST00000221459 KIF27Q86VH2 1401 aa36.45■■■■□ 3.43
LIN7B-201ENST00000221459 IGF1RP08069 1367 aa36.34■■■■□ 3.41
LIN7B-201ENST00000221459 CUL7Q14999 1698 aa36.32■■■■□ 3.4
LIN7B-201ENST00000221459 SHROOM2Q13796 1616 aa36.3■■■■□ 3.4
LIN7B-201ENST00000221459 ERCC6L2Q5T890 1561 aa36.24■■■■□ 3.39
LIN7B-201ENST00000221459 RUSC2Q8N2Y8 1516 aa36.21■■■■□ 3.39
LIN7B-201ENST00000221459 CARMIL1Q5VZK9 1371 aa36.11■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms