Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 KCTD7-208ENST00000640234 1704 ntTSL 59.16□□□□□ -0.946e-6■■■□□ 19.1
SRSF1Q07955 GTF3C1-212ENST00000570129 505 ntTSL 59.14□□□□□ -0.956e-6■■■□□ 19.1
SRSF1Q07955 KCTD7-207ENST00000639879 5098 ntTSL 4 BASIC9.05□□□□□ -0.966e-6■■■□□ 19.1
SRSF1Q07955 KCTD7-211ENST00000640851 3745 ntTSL 5 BASIC8.67□□□□□ -1.026e-6■■■□□ 19.1
SRSF1Q07955 APOL2-201ENST00000249066 2685 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.055e-7■■■□□ 19.1
SRSF1Q07955 RNASET2-209ENST00000499370 2164 ntTSL 28.46□□□□□ -1.056e-6■■■□□ 19.1
SRSF1Q07955 GTF3C1-202ENST00000561623 7015 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.052e-7■■■□□ 19.1
SRSF1Q07955 PDK1-209ENST00000466437 599 ntTSL 48.38□□□□□ -1.076e-6■■■□□ 19.1
SRSF1Q07955 RNASET2-208ENST00000496851 881 ntTSL 58.24□□□□□ -1.096e-6■■■□□ 19.1
SRSF1Q07955 APOL2-204ENST00000454728 577 ntTSL 47.97□□□□□ -1.135e-7■■■□□ 19.1
SRSF1Q07955 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.26e-6■■■□□ 19.1
SRSF1Q07955 KCTD7-205ENST00000638540 4471 ntTSL 57.47□□□□□ -1.216e-6■■■□□ 19.1
SRSF1Q07955 KCTD7-204ENST00000638524 3747 ntTSL 57.21□□□□□ -1.256e-6■■■□□ 19.1
SRSF1Q07955 APOL2-202ENST00000358502 2551 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.265e-7■■■□□ 19.1
SRSF1Q07955 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.396e-6■■■□□ 19.1
SRSF1Q07955 UBN2-203ENST00000486663 589 ntTSL 45.33□□□□□ -1.566e-6■■■□□ 19.1
SRSF1Q07955 ECT2-212ENST00000444250 627 ntTSL 34.06□□□□□ -1.766e-6■■■□□ 19.1
SRSF1Q07955 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.976e-6■■■□□ 19.1
SRSF1Q07955 LIG1-206ENST00000594067 2697 ntTSL 212.6□□□□□ -0.396e-6■■■□□ 19
SRSF1Q07955 PRPF31-205ENST00000445811 928 ntTSL 517.82■□□□□ 0.446e-10■■■□□ 19
SRSF1Q07955 PRPF31-206ENST00000447810 854 ntTSL 515.74■□□□□ 0.116e-10■■■□□ 19
SRSF1Q07955 PRPF31-204ENST00000445124 886 ntTSL 515.51■□□□□ 0.076e-10■■■□□ 19
SRSF1Q07955 PRPF31-208ENST00000467851 289 ntTSL 21.72□□□□□ -2.136e-10■■■□□ 19
SRSF1Q07955 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.16■□□□□ 0.023e-6■■■□□ 19
SRSF1Q07955 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.253e-6■■■□□ 19
SRSF1Q07955 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.523e-6■■■□□ 19
SRSF1Q07955 SPAG5-216ENST00000584206 715 ntTSL 46.38□□□□□ -1.392e-7■■■□□ 19
SRSF1Q07955 RTKN-208ENST00000479256 564 ntTSL 514.8□□□□□ -0.044e-6■■■□□ 19
SRSF1Q07955 HSP90AB2P-202ENST00000602906 1277 ntTSL 1 (best) BASIC7.92□□□□□ -1.142e-10■■■□□ 19
SRSF1Q07955 HSP90AB2P-201ENST00000507090 2176 ntBASIC6.57□□□□□ -1.362e-10■■■□□ 19
SRSF1Q07955 IST1-221ENST00000544564 1500 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.588e-7■■■□□ 19
SRSF1Q07955 IST1-215ENST00000538850 1125 ntTSL 3 BASIC10.54□□□□□ -0.728e-7■■■□□ 19
SRSF1Q07955 IST1-219ENST00000541571 1962 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.728e-7■■■□□ 19
SRSF1Q07955 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.738e-7■■■□□ 19
SRSF1Q07955 IST1-213ENST00000538565 1245 ntTSL 210.41□□□□□ -0.748e-7■■■□□ 19
SRSF1Q07955 IST1-201ENST00000329908 2356 ntTSL 1 (best) BASIC9.21□□□□□ -0.938e-7■■■□□ 19
SRSF1Q07955 IST1-202ENST00000378798 2255 ntTSL 1 (best) BASIC9.07□□□□□ -0.968e-7■■■□□ 19
SRSF1Q07955 IST1-208ENST00000535424 4082 ntTSL 5 BASIC7.23□□□□□ -1.258e-7■■■□□ 19
SRSF1Q07955 IST1-226ENST00000606369 3583 ntTSL 2 BASIC7□□□□□ -1.298e-7■■■□□ 19
SRSF1Q07955 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.31e-6■■■□□ 19
SRSF1Q07955 EWSR1-205ENST00000360091 1289 ntTSL 518.52■□□□□ 0.561e-9■■■□□ 18.9
SRSF1Q07955 EWSR1-218ENST00000483629 1818 ntTSL 514.75□□□□□ -0.051e-9■■■□□ 18.9
SRSF1Q07955 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.074e-9■■■□□ 18.9
SRSF1Q07955 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.14e-9■■■□□ 18.9
SRSF1Q07955 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.164e-9■■■□□ 18.9
SRSF1Q07955 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.254e-9■■■□□ 18.9
SRSF1Q07955 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.3□□□□□ -0.284e-9■■■□□ 18.9
SRSF1Q07955 EWSR1-221ENST00000610553 2300 ntTSL 213.05□□□□□ -0.321e-9■■■□□ 18.9
SRSF1Q07955 EWSR1-215ENST00000469669 2630 ntTSL 213.05□□□□□ -0.321e-9■■■□□ 18.9
SRSF1Q07955 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.02□□□□□ -0.334e-9■■■□□ 18.9
SRSF1Q07955 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.74□□□□□ -0.374e-9■■■□□ 18.9
SRSF1Q07955 EWSR1-216ENST00000479135 7285 ntTSL 1 (best)9.35□□□□□ -0.914e-9■■■□□ 18.9
SRSF1Q07955 CTTN-205ENST00000415461 1021 ntTSL 319.08■□□□□ 0.643e-6■■■□□ 18.9
SRSF1Q07955 PPP6R2-206ENST00000427222 1811 ntTSL 514.88□□□□□ -0.031e-6■■■□□ 18.9
SRSF1Q07955 PPP6R2-205ENST00000401672 2199 ntTSL 210.69□□□□□ -0.71e-6■■■□□ 18.9
SRSF1Q07955 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.113e-6■■■□□ 18.9
SRSF1Q07955 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.153e-6■■■□□ 18.9
SRSF1Q07955 SGSM2-211ENST00000574563 3410 ntTSL 2 BASIC9.24□□□□□ -0.933e-6■■■□□ 18.9
SRSF1Q07955 PPP6R1-206ENST00000591323 848 ntTSL 315.2■□□□□ 0.022e-6■■■□□ 18.9
SRSF1Q07955 PPP6R1-207ENST00000591602 520 ntTSL 514.83□□□□□ -0.042e-6■■■□□ 18.9
SRSF1Q07955 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.322e-6■■■□□ 18.9
SRSF1Q07955 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.422e-6■■■□□ 18.9
SRSF1Q07955 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.462e-6■■■□□ 18.9
SRSF1Q07955 AC009404.1-202ENST00000439955 968 ntTSL 3 BASIC11.41□□□□□ -0.582e-6■■■□□ 18.9
SRSF1Q07955 MC1R-201ENST00000539976 2464 ntTSL 510.97□□□□□ -0.652e-6■■■□□ 18.9
SRSF1Q07955 SEC16A-207ENST00000453963 4834 ntAPPRIS ALT2 TSL 1 (best)9.95□□□□□ -0.822e-6■■■□□ 18.9
SRSF1Q07955 SEC16A-206ENST00000431893 6465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.882e-6■■■□□ 18.9
SRSF1Q07955 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC9.1□□□□□ -0.952e-6■■■□□ 18.9
SRSF1Q07955 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.962e-6■■■□□ 18.9
SRSF1Q07955 GGA1-221ENST00000488672 547 ntTSL 57.73□□□□□ -1.172e-6■■■□□ 18.9
SRSF1Q07955 SEC16A-201ENST00000277537 3910 ntAPPRIS ALT2 TSL 1 (best)6.83□□□□□ -1.322e-6■■■□□ 18.9
SRSF1Q07955 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.59□□□□□ -1.512e-6■■■□□ 18.9
SRSF1Q07955 C9orf3-210ENST00000462125 961 ntTSL 312.54□□□□□ -0.46e-7■■■□□ 18.9
SRSF1Q07955 C9orf3-204ENST00000424143 1605 ntTSL 211.89□□□□□ -0.516e-7■■■□□ 18.9
SRSF1Q07955 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.78■□□□□ 0.122e-7■■■□□ 18.9
SRSF1Q07955 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.072e-7■■■□□ 18.9
SRSF1Q07955 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.95□□□□□ -0.342e-7■■■□□ 18.9
SRSF1Q07955 KIF22-202ENST00000400751 2493 ntTSL 2 BASIC9.49□□□□□ -0.892e-7■■■□□ 18.9
SRSF1Q07955 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.183e-6■■■□□ 18.8
SRSF1Q07955 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC11.47□□□□□ -0.573e-6■■■□□ 18.8
SRSF1Q07955 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.524e-9■■■□□ 18.8
SRSF1Q07955 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.584e-9■■■□□ 18.8
SRSF1Q07955 ISYNA1-209ENST00000582287 696 ntTSL 1 (best)19.48■□□□□ 0.711e-9■■■□□ 18.8
SRSF1Q07955 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.4■□□□□ 0.221e-9■■■□□ 18.8
SRSF1Q07955 ISYNA1-214ENST00000583816 860 ntTSL 313.75□□□□□ -0.211e-9■■■□□ 18.8
SRSF1Q07955 ISYNA1-212ENST00000583309 371 ntTSL 210.11□□□□□ -0.791e-9■■■□□ 18.8
SRSF1Q07955 ISYNA1-207ENST00000581672 793 ntTSL 29.14□□□□□ -0.951e-9■■■□□ 18.8
SRSF1Q07955 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.226e-8■■■□□ 18.8
SRSF1Q07955 CSNK1D-205ENST00000403276 1040 ntTSL 215.87■□□□□ 0.136e-8■■■□□ 18.8
SRSF1Q07955 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.56■□□□□ 0.086e-8■■■□□ 18.8
SRSF1Q07955 CSNK1D-213ENST00000580446 612 ntTSL 315.54■□□□□ 0.086e-8■■■□□ 18.8
SRSF1Q07955 CSNK1D-219ENST00000581660 611 ntTSL 514.73□□□□□ -0.056e-8■■■□□ 18.8
SRSF1Q07955 CSNK1D-217ENST00000581241 6094 ntTSL 212.2□□□□□ -0.466e-8■■■□□ 18.8
SRSF1Q07955 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.626e-8■■■□□ 18.8
SRSF1Q07955 C9orf3-216ENST00000478603 802 ntTSL 221.96■■□□□ 1.117e-9■■■□□ 18.8
SRSF1Q07955 C9orf3-209ENST00000460573 443 ntTSL 520.53■□□□□ 0.887e-9■■■□□ 18.8
SRSF1Q07955 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.33□□□□□ -0.123e-7■■■□□ 18.8
SRSF1Q07955 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC11.6□□□□□ -0.553e-7■■■□□ 18.8
SRSF1Q07955 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.256e-6■■■□□ 18.8
SRSF1Q07955 RABEP2-213ENST00000568703 1045 ntTSL 222.27■■□□□ 1.166e-6■■■□□ 18.8
Retrieved 100 of 14,836 protein–RNA pairs in 26.1 ms