RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 NISCHQ9Y2I1 1504 aa26.49■■□□□ 1.83
CSNK1D-202ENST00000314028 SHROOM4Q9ULL8 1493 aa24.73■■□□□ 1.55
CSNK1D-202ENST00000314028 SUPT5HO00267 1087 aaKnown RBP24.7■■□□□ 1.54
CSNK1D-202ENST00000314028 DCAF8L2P0C7V8 631 aa24.51■■□□□ 1.51
CSNK1D-202ENST00000314028 PCGF6Q9BYE7 350 aa23.74■■□□□ 1.39
CSNK1D-202ENST00000314028 EHMT2Q96KQ7 1210 aa23.48■■□□□ 1.35
CSNK1D-202ENST00000314028 PPARGC1BQ86YN6 1023 aaKnown RBP23.3■■□□□ 1.32
CSNK1D-202ENST00000314028 HRCP23327 699 aa23.27■■□□□ 1.32
CSNK1D-202ENST00000314028 CHIC1Q5VXU3 224 aa23.2■■□□□ 1.3
CSNK1D-202ENST00000314028 LOC105371045A0A1W2PR82 267 aa23.11■■□□□ 1.29
CSNK1D-202ENST00000314028 FAM9AQ8IZU1 332 aaPredicted RBP23.1■■□□□ 1.29
CSNK1D-202ENST00000314028 TTBK1Q5TCY1 1321 aaPredicted RBP22.73■■□□□ 1.23
CSNK1D-202ENST00000314028 MYO15BQ96JP2 1530 aa22.69■■□□□ 1.22
CSNK1D-202ENST00000314028 TRIM41Q8WV44 630 aa22.6■■□□□ 1.21
CSNK1D-202ENST00000314028 TRIM26Q12899 539 aaPredicted RBP22.58■■□□□ 1.21
CSNK1D-202ENST00000314028 CCER1Q8TC90 406 aaPredicted RBP22.29■■□□□ 1.16
CSNK1D-202ENST00000314028 ZEB1P37275 1124 aaPredicted RBP22.28■■□□□ 1.16
CSNK1D-202ENST00000314028 ZCCHC6Q5VYS8 1495 aaKnown RBP22.26■■□□□ 1.15
CSNK1D-202ENST00000314028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.14■■□□□ 1.13
CSNK1D-202ENST00000314028 PELP1Q8IZL8 1130 aaKnown RBP22.14■■□□□ 1.13
CSNK1D-202ENST00000314028 YTHDC1Q96MU7 727 aaKnown RBP22.03■■□□□ 1.12
CSNK1D-202ENST00000314028 RANGAP1P46060 587 aaPredicted RBP22■■□□□ 1.11
CSNK1D-202ENST00000314028 DCAF1Q9Y4B6 1507 aa21.95■■□□□ 1.1
CSNK1D-202ENST00000314028 CENPBP07199 599 aaPredicted RBP21.87■■□□□ 1.09
CSNK1D-202ENST00000314028 UBTFP17480 764 aaKnown RBP21.84■■□□□ 1.09
CSNK1D-202ENST00000314028 SCAF1Q9H7N4 1312 aaKnown RBP21.82■■□□□ 1.08
CSNK1D-202ENST00000314028 DIEXFQ68CQ4 756 aaKnown RBP21.73■■□□□ 1.07
CSNK1D-202ENST00000314028 GTF3C3Q9Y5Q9 886 aa21.69■■□□□ 1.06
CSNK1D-202ENST00000314028 HNRNPUL2Q1KMD3 747 aaKnown RBP21.64■■□□□ 1.05
CSNK1D-202ENST00000314028 APLP2Q06481 763 aa21.63■■□□□ 1.05
CSNK1D-202ENST00000314028 NEUROD1Q13562 356 aa21.58■■□□□ 1.04
CSNK1D-202ENST00000314028 CCDC180Q9P1Z9 1646 aa21.57■■□□□ 1.04
CSNK1D-202ENST00000314028 ACIN1Q9UKV3 1341 aaKnown RBP21.54■■□□□ 1.04
CSNK1D-202ENST00000314028 SCRIBQ14160 1630 aa21.51■■□□□ 1.03
CSNK1D-202ENST00000314028 RSF1Q96T23 1441 aaPredicted RBP21.42■■□□□ 1.02
CSNK1D-202ENST00000314028 ABCC9O60706 1549 aa21.41■■□□□ 1.02
CSNK1D-202ENST00000314028 MYT1Q01538 1121 aa21.32■■□□□ 1
CSNK1D-202ENST00000314028 ITGAEP38570 1179 aa21.27■■□□□ 1
CSNK1D-202ENST00000314028 ZNF316A6NFI3 1004 aaPredicted RBP21.22■□□□□ 0.99
CSNK1D-202ENST00000314028 RB1CC1Q8TDY2 1594 aa21.17■□□□□ 0.98
CSNK1D-202ENST00000314028 PABPN1Q86U42 306 aaKnown RBP eCLIP21.14■□□□□ 0.973e-7■■■□□ 17.8
CSNK1D-202ENST00000314028 ATP1B4Q9UN42 357 aaPredicted RBP21.1■□□□□ 0.97
CSNK1D-202ENST00000314028 CECR2Q9BXF3 1484 aa21.08■□□□□ 0.97
CSNK1D-202ENST00000314028 CSRNP3Q8WYN3 585 aa21.08■□□□□ 0.97
CSNK1D-202ENST00000314028 MIER1Q8N108 512 aa21.07■□□□□ 0.96
CSNK1D-202ENST00000314028 BCANQ96GW7 911 aa20.95■□□□□ 0.95
CSNK1D-202ENST00000314028 CEP162Q5TB80 1403 aa20.89■□□□□ 0.93
CSNK1D-202ENST00000314028 MROH2BQ7Z745 1585 aa20.83■□□□□ 0.93
CSNK1D-202ENST00000314028 SOGA1O94964 1423 aa20.79■□□□□ 0.92
CSNK1D-202ENST00000314028 ABCC8Q09428 1581 aa20.75■□□□□ 0.91
CSNK1D-202ENST00000314028 CCDC88BA6NC98 1476 aa20.72■□□□□ 0.91
CSNK1D-202ENST00000314028 NEFLP07196 543 aa20.71■□□□□ 0.91
CSNK1D-202ENST00000314028 WIZO95785 1651 aa20.67■□□□□ 0.9
CSNK1D-202ENST00000314028 FAM50AQ14320 339 aaKnown RBP20.63■□□□□ 0.89
CSNK1D-202ENST00000314028 CNGB1Q14028 1251 aaPredicted RBP20.62■□□□□ 0.89
CSNK1D-202ENST00000314028 TNIKQ9UKE5 1360 aa20.6■□□□□ 0.89
CSNK1D-202ENST00000314028 HIRIP3Q9BW71 556 aaPredicted RBP20.58■□□□□ 0.89
CSNK1D-202ENST00000314028 CLIP1P30622 1438 aa20.58■□□□□ 0.89
CSNK1D-202ENST00000314028 RUSC2Q8N2Y8 1516 aa20.56■□□□□ 0.88
CSNK1D-202ENST00000314028 P3H3Q8IVL6 736 aa20.54■□□□□ 0.88
CSNK1D-202ENST00000314028 ERICH6Q7L0X2 663 aa20.53■□□□□ 0.88
CSNK1D-202ENST00000314028 DDX10Q13206 875 aaKnown RBP20.52■□□□□ 0.87
CSNK1D-202ENST00000314028 FKBP8Q14318 412 aa20.48■□□□□ 0.87
CSNK1D-202ENST00000314028 GOLGA3Q08378 1498 aa20.48■□□□□ 0.87
CSNK1D-202ENST00000314028 TRIM52Q96A61 297 aa20.45■□□□□ 0.86
CSNK1D-202ENST00000314028 WRNQ14191 1432 aaPredicted RBP eCLIP20.43■□□□□ 0.863e-6■■■■■ 43
CSNK1D-202ENST00000314028 SUPT16HQ9Y5B9 1047 aaKnown RBP20.41■□□□□ 0.86
CSNK1D-202ENST00000314028 BAZ1AQ9NRL2 1556 aaPredicted RBP20.37■□□□□ 0.85
CSNK1D-202ENST00000314028 NACADO15069 1562 aa20.36■□□□□ 0.85
CSNK1D-202ENST00000314028 POLR3GLQ9BT43 218 aa20.35■□□□□ 0.85
CSNK1D-202ENST00000314028 KANK4Q5T7N3 995 aaPredicted RBP20.34■□□□□ 0.85
CSNK1D-202ENST00000314028 KCNH8Q96L42 1107 aa20.33■□□□□ 0.85
CSNK1D-202ENST00000314028 EEA1Q15075 1411 aa20.31■□□□□ 0.84
CSNK1D-202ENST00000314028 ANP32CO43423 234 aa20.29■□□□□ 0.84
CSNK1D-202ENST00000314028 IRX6P78412 446 aaPredicted RBP20.27■□□□□ 0.84
CSNK1D-202ENST00000314028 SIN3AQ96ST3 1273 aa20.27■□□□□ 0.83
CSNK1D-202ENST00000314028 CEP164Q9UPV0 1460 aa20.26■□□□□ 0.83
CSNK1D-202ENST00000314028 BCL11AQ9H165 835 aa20.23■□□□□ 0.83
CSNK1D-202ENST00000314028 VPS8Q8N3P4 1428 aa20.19■□□□□ 0.82
CSNK1D-202ENST00000314028 ARID3CA6NKF2 412 aa20.18■□□□□ 0.82
CSNK1D-202ENST00000314028 RAPGEF2Q9Y4G8 1499 aa20.14■□□□□ 0.81
CSNK1D-202ENST00000314028 HNRNPUQ00839 825 aaKnown RBP eCLIP20.13■□□□□ 0.813e-18■□□□□ 9.1
CSNK1D-202ENST00000314028 TSHZ2Q9NRE2 1034 aa20.13■□□□□ 0.81
CSNK1D-202ENST00000314028 TOP2AP11388 1531 aaKnown RBP20.12■□□□□ 0.81
CSNK1D-202ENST00000314028 SENP3-EIF4A1A0A087X0R7 540 aa20.09■□□□□ 0.81
CSNK1D-202ENST00000314028 CLSPNQ9HAW4 1339 aa20.07■□□□□ 0.8
CSNK1D-202ENST00000314028 ANP32EQ9BTT0 268 aa20.07■□□□□ 0.8
CSNK1D-202ENST00000314028 DHX57Q6P158 1386 aaKnown RBP20.06■□□□□ 0.8
CSNK1D-202ENST00000314028 SMARCA2P51531 1590 aa20.03■□□□□ 0.8
CSNK1D-202ENST00000314028 CDK11AQ9UQ88 783 aaPredicted RBP20.02■□□□□ 0.8
CSNK1D-202ENST00000314028 CHIC2Q9UKJ5 165 aa20.01■□□□□ 0.79
CSNK1D-202ENST00000314028 CCNB3Q8WWL7 1395 aa20.01■□□□□ 0.79
CSNK1D-202ENST00000314028 TONSLQ96HA7 1378 aa20.01■□□□□ 0.79
CSNK1D-202ENST00000314028 ZNF326Q5BKZ1 582 aaKnown RBP20■□□□□ 0.79
CSNK1D-202ENST00000314028 FAM9BQ8IZU0 186 aa19.99■□□□□ 0.79
CSNK1D-202ENST00000314028 BAZ1BQ9UIG0 1483 aaKnown RBP19.99■□□□□ 0.79
CSNK1D-202ENST00000314028 SMARCA4P51532 1647 aa19.98■□□□□ 0.79
CSNK1D-202ENST00000314028 RAB3GAP2Q9H2M9 1393 aa19.93■□□□□ 0.78
CSNK1D-202ENST00000314028 RBM19Q9Y4C8 960 aaKnown RBP19.89■□□□□ 0.78
CSNK1D-202ENST00000314028 RRP7BPQ9NSQ0 103 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms