RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 NISCHQ9Y2I1 1504 aa25.25■■□□□ 1.63
SEC16A-202ENST00000290037 DCAF8L2P0C7V8 631 aa23.88■■□□□ 1.41
SEC16A-202ENST00000290037 PELP1Q8IZL8 1130 aaKnown RBP23.82■■□□□ 1.4
SEC16A-202ENST00000290037 FAM9AQ8IZU1 332 aaPredicted RBP23.19■■□□□ 1.3
SEC16A-202ENST00000290037 ZEB1P37275 1124 aaPredicted RBP23.05■■□□□ 1.28
SEC16A-202ENST00000290037 SUPT5HO00267 1087 aaKnown RBP23.04■■□□□ 1.28
SEC16A-202ENST00000290037 APLP2Q06481 763 aa22.99■■□□□ 1.27
SEC16A-202ENST00000290037 MYT1Q01538 1121 aa22.86■■□□□ 1.25
SEC16A-202ENST00000290037 CCER1Q8TC90 406 aaPredicted RBP22.62■■□□□ 1.21
SEC16A-202ENST00000290037 CENPBP07199 599 aaPredicted RBP22.52■■□□□ 1.2
SEC16A-202ENST00000290037 SHROOM4Q9ULL8 1493 aa22.48■■□□□ 1.19
SEC16A-202ENST00000290037 TRIM41Q8WV44 630 aa22.07■■□□□ 1.12
SEC16A-202ENST00000290037 CCDC180Q9P1Z9 1646 aa21.95■■□□□ 1.1
SEC16A-202ENST00000290037 NEFLP07196 543 aa21.88■■□□□ 1.09
SEC16A-202ENST00000290037 ERICH6Q7L0X2 663 aa21.85■■□□□ 1.09
SEC16A-202ENST00000290037 TRIM26Q12899 539 aaPredicted RBP21.75■■□□□ 1.07
SEC16A-202ENST00000290037 PCGF6Q9BYE7 350 aa21.75■■□□□ 1.07
SEC16A-202ENST00000290037 YTHDC1Q96MU7 727 aaKnown RBP21.75■■□□□ 1.07
SEC16A-202ENST00000290037 UBTFP17480 764 aaKnown RBP21.62■■□□□ 1.05
SEC16A-202ENST00000290037 CLSPNQ9HAW4 1339 aa21.34■■□□□ 1.01
SEC16A-202ENST00000290037 HRCP23327 699 aa21.27■■□□□ 1
SEC16A-202ENST00000290037 DAXXQ9UER7 740 aaPredicted RBP21.2■□□□□ 0.98
SEC16A-202ENST00000290037 ACIN1Q9UKV3 1341 aaKnown RBP21.2■□□□□ 0.98
SEC16A-202ENST00000290037 EHMT2Q96KQ7 1210 aa21.15■□□□□ 0.98
SEC16A-202ENST00000290037 ZCCHC6Q5VYS8 1495 aaKnown RBP21.06■□□□□ 0.96
SEC16A-202ENST00000290037 CHIC1Q5VXU3 224 aa21.04■□□□□ 0.96
SEC16A-202ENST00000290037 ATP1B4Q9UN42 357 aaPredicted RBP21.04■□□□□ 0.96
SEC16A-202ENST00000290037 DCAF1Q9Y4B6 1507 aa20.9■□□□□ 0.94
SEC16A-202ENST00000290037 TTBK1Q5TCY1 1321 aaPredicted RBP20.79■□□□□ 0.92
SEC16A-202ENST00000290037 EEA1Q15075 1411 aa20.77■□□□□ 0.92
SEC16A-202ENST00000290037 NACADO15069 1562 aa20.77■□□□□ 0.92
SEC16A-202ENST00000290037 MYT1LQ9UL68 1186 aa20.77■□□□□ 0.92
SEC16A-202ENST00000290037 RB1CC1Q8TDY2 1594 aa20.75■□□□□ 0.91
SEC16A-202ENST00000290037 RTL5Q5HYW3 569 aaPredicted RBP20.74■□□□□ 0.91
SEC16A-202ENST00000290037 RANGAP1P46060 587 aaPredicted RBP20.67■□□□□ 0.9
SEC16A-202ENST00000290037 DIEXFQ68CQ4 756 aaKnown RBP20.66■□□□□ 0.9
SEC16A-202ENST00000290037 ZNF316A6NFI3 1004 aaPredicted RBP20.61■□□□□ 0.89
SEC16A-202ENST00000290037 CDK11AQ9UQ88 783 aaPredicted RBP20.57■□□□□ 0.88
SEC16A-202ENST00000290037 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.55■□□□□ 0.88
SEC16A-202ENST00000290037 HNRNPUL2Q1KMD3 747 aaKnown RBP20.55■□□□□ 0.88
SEC16A-202ENST00000290037 ANP32CO43423 234 aa20.54■□□□□ 0.88
SEC16A-202ENST00000290037 NEFMP07197 916 aa20.5■□□□□ 0.87
SEC16A-202ENST00000290037 ABCC9O60706 1549 aa20.5■□□□□ 0.87
SEC16A-202ENST00000290037 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
SEC16A-202ENST00000290037 ZBTB47Q9UFB7 747 aaPredicted RBP20.38■□□□□ 0.85
SEC16A-202ENST00000290037 MYO15BQ96JP2 1530 aa20.36■□□□□ 0.85
SEC16A-202ENST00000290037 CSRNP3Q8WYN3 585 aa20.35■□□□□ 0.85
SEC16A-202ENST00000290037 EIF5BO60841 1220 aaKnown RBP20.33■□□□□ 0.84
SEC16A-202ENST00000290037 FAM50AQ14320 339 aaKnown RBP20.3■□□□□ 0.84
SEC16A-202ENST00000290037 BAZ1AQ9NRL2 1556 aaPredicted RBP20.26■□□□□ 0.83
SEC16A-202ENST00000290037 ITGAEP38570 1179 aa20.24■□□□□ 0.83
SEC16A-202ENST00000290037 LOC105371045A0A1W2PR82 267 aa20.23■□□□□ 0.83
SEC16A-202ENST00000290037 RSF1Q96T23 1441 aaPredicted RBP20.22■□□□□ 0.83
SEC16A-202ENST00000290037 TRIM52Q96A61 297 aa20.19■□□□□ 0.82
SEC16A-202ENST00000290037 ANP32AP39687 249 aaKnown RBP20.18■□□□□ 0.82
SEC16A-202ENST00000290037 GOLGA3Q08378 1498 aa20.17■□□□□ 0.82
SEC16A-202ENST00000290037 TONSLQ96HA7 1378 aa20.14■□□□□ 0.81
SEC16A-202ENST00000290037 SLC24A1O60721 1099 aa20.14■□□□□ 0.81
SEC16A-202ENST00000290037 POLR3GLQ9BT43 218 aa20.1■□□□□ 0.81
SEC16A-202ENST00000290037 ANP32BQ92688 251 aaKnown RBP20.08■□□□□ 0.81
SEC16A-202ENST00000290037 CEP164Q9UPV0 1460 aa20.08■□□□□ 0.8
SEC16A-202ENST00000290037 UPF2Q9HAU5 1272 aaKnown RBP20.06■□□□□ 0.8
SEC16A-202ENST00000290037 ANP32EQ9BTT0 268 aa20.05■□□□□ 0.8
SEC16A-202ENST00000290037 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.04■□□□□ 0.8
SEC16A-202ENST00000290037 CANXP27824 592 aaKnown RBP19.98■□□□□ 0.79
SEC16A-202ENST00000290037 PPARGC1BQ86YN6 1023 aaKnown RBP19.97■□□□□ 0.79
SEC16A-202ENST00000290037 CLIP1P30622 1438 aa19.96■□□□□ 0.79
SEC16A-202ENST00000290037 FHAD1B1AJZ9 1412 aa19.96■□□□□ 0.79
SEC16A-202ENST00000290037 SMARCA2P51531 1590 aa19.94■□□□□ 0.78
SEC16A-202ENST00000290037 SLC4A1APQ9BWU0 796 aaKnown RBP19.94■□□□□ 0.78
SEC16A-202ENST00000290037 BAZ1BQ9UIG0 1483 aaKnown RBP19.93■□□□□ 0.78
SEC16A-202ENST00000290037 GLIPR1L2Q4G1C9 344 aa19.92■□□□□ 0.78
SEC16A-202ENST00000290037 KIF27Q86VH2 1401 aa19.92■□□□□ 0.78
SEC16A-202ENST00000290037 TIMELESSQ9UNS1 1208 aa19.92■□□□□ 0.78
SEC16A-202ENST00000290037 TNIKQ9UKE5 1360 aa19.87■□□□□ 0.77
SEC16A-202ENST00000290037 CDCA8Q53HL2 280 aa19.86■□□□□ 0.77
SEC16A-202ENST00000290037 GTF3C3Q9Y5Q9 886 aa19.86■□□□□ 0.77
SEC16A-202ENST00000290037 NEUROD1Q13562 356 aa19.84■□□□□ 0.77
SEC16A-202ENST00000290037 MTUS2Q5JR59 1369 aa19.83■□□□□ 0.76
SEC16A-202ENST00000290037 WRNQ14191 1432 aaPredicted RBP eCLIP19.8■□□□□ 0.76
SEC16A-202ENST00000290037 ARID4BQ4LE39 1312 aaPredicted RBP19.79■□□□□ 0.76
SEC16A-202ENST00000290037 PABPN1Q86U42 306 aaKnown RBP eCLIP19.78■□□□□ 0.76
SEC16A-202ENST00000290037 CHMP4BQ9H444 224 aaKnown RBP19.77■□□□□ 0.75
SEC16A-202ENST00000290037 DDRGK1Q96HY6 314 aa19.74■□□□□ 0.75
SEC16A-202ENST00000290037 CEP162Q5TB80 1403 aa19.73■□□□□ 0.75
SEC16A-202ENST00000290037 ESF1Q9H501 851 aaKnown RBP19.72■□□□□ 0.75
SEC16A-202ENST00000290037 NPM1P06748 294 aaKnown RBP eCLIP19.71■□□□□ 0.75
SEC16A-202ENST00000290037 TSPY4P0CV99 314 aa19.71■□□□□ 0.75
SEC16A-202ENST00000290037 TSPY10P0CW01 314 aa19.71■□□□□ 0.75
SEC16A-202ENST00000290037 CFAP44Q96MT7 982 aa19.68■□□□□ 0.74
SEC16A-202ENST00000290037 BECN1Q14457 450 aa19.63■□□□□ 0.73
SEC16A-202ENST00000290037 ERICH6BQ5W0A0 696 aa19.63■□□□□ 0.73
SEC16A-202ENST00000290037 HSP90AA1P07900 732 aaKnown RBP19.62■□□□□ 0.73
SEC16A-202ENST00000290037 MYH16Q9H6N6 1097 aa19.61■□□□□ 0.73
SEC16A-202ENST00000290037 EIF4G2P78344 907 aaKnown RBP eCLIP19.6■□□□□ 0.73
SEC16A-202ENST00000290037 MS4A1P11836 297 aa19.6■□□□□ 0.73
SEC16A-202ENST00000290037 ZNF326Q5BKZ1 582 aaKnown RBP19.59■□□□□ 0.73
SEC16A-202ENST00000290037 TOP2AP11388 1531 aaKnown RBP19.58■□□□□ 0.73
SEC16A-202ENST00000290037 TMC1Q8TDI8 760 aa19.58■□□□□ 0.72
SEC16A-202ENST00000290037 WDR43Q15061 677 aaKnown RBP eCLIP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms