RNA–Protein interactions for RNA: ENST00000539976.1

MC1R-201, Transcript of melanocortin 1 receptor, humanhuman

TSL 5

Gene MC1R, Length 2,464 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MC1R-201ENST00000539976 NISCHQ9Y2I1 1504 aa27.83■■■□□ 2.05
MC1R-201ENST00000539976 CCDC180Q9P1Z9 1646 aa23.95■■□□□ 1.42
MC1R-201ENST00000539976 HRCP23327 699 aa23.56■■□□□ 1.36
MC1R-201ENST00000539976 SHROOM4Q9ULL8 1493 aa23.49■■□□□ 1.35
MC1R-201ENST00000539976 ZCCHC6Q5VYS8 1495 aaKnown RBP23.49■■□□□ 1.35
MC1R-201ENST00000539976 SUPT5HO00267 1087 aaKnown RBP23.36■■□□□ 1.33
MC1R-201ENST00000539976 MYO15BQ96JP2 1530 aa23.18■■□□□ 1.3
MC1R-201ENST00000539976 PCGF6Q9BYE7 350 aa23.07■■□□□ 1.28
MC1R-201ENST00000539976 CHIC1Q5VXU3 224 aa23.04■■□□□ 1.28
MC1R-201ENST00000539976 DCAF8L2P0C7V8 631 aa23.03■■□□□ 1.28
MC1R-201ENST00000539976 PPARGC1BQ86YN6 1023 aaKnown RBP22.98■■□□□ 1.27
MC1R-201ENST00000539976 DCAF1Q9Y4B6 1507 aa22.88■■□□□ 1.25
MC1R-201ENST00000539976 PELP1Q8IZL8 1130 aaKnown RBP22.58■■□□□ 1.21
MC1R-201ENST00000539976 ABCC9O60706 1549 aa22.46■■□□□ 1.19
MC1R-201ENST00000539976 TRIM26Q12899 539 aaPredicted RBP22.45■■□□□ 1.18
MC1R-201ENST00000539976 LOC105371045A0A1W2PR82 267 aa22.41■■□□□ 1.18
MC1R-201ENST00000539976 SCRIBQ14160 1630 aa22.32■■□□□ 1.16
MC1R-201ENST00000539976 ZEB1P37275 1124 aaPredicted RBP22.26■■□□□ 1.15
MC1R-201ENST00000539976 NACADO15069 1562 aa22.2■■□□□ 1.14
MC1R-201ENST00000539976 SCAF1Q9H7N4 1312 aaKnown RBP22.18■■□□□ 1.14
MC1R-201ENST00000539976 RB1CC1Q8TDY2 1594 aa21.94■■□□□ 1.1
MC1R-201ENST00000539976 RSF1Q96T23 1441 aaPredicted RBP21.82■■□□□ 1.08
MC1R-201ENST00000539976 CECR2Q9BXF3 1484 aa21.71■■□□□ 1.07
MC1R-201ENST00000539976 ACIN1Q9UKV3 1341 aaKnown RBP21.71■■□□□ 1.07
MC1R-201ENST00000539976 TRIM41Q8WV44 630 aa21.68■■□□□ 1.06
MC1R-201ENST00000539976 MYT1Q01538 1121 aa21.68■■□□□ 1.06
MC1R-201ENST00000539976 UNC13AQ9UPW8 1703 aa21.62■■□□□ 1.05
MC1R-201ENST00000539976 NEUROD1Q13562 356 aa21.62■■□□□ 1.05
MC1R-201ENST00000539976 MROH2BQ7Z745 1585 aa21.61■■□□□ 1.05
MC1R-201ENST00000539976 FAM9AQ8IZU1 332 aaPredicted RBP21.57■■□□□ 1.04
MC1R-201ENST00000539976 GTF3C3Q9Y5Q9 886 aa21.48■■□□□ 1.03
MC1R-201ENST00000539976 WIZO95785 1651 aa21.48■■□□□ 1.03
MC1R-201ENST00000539976 CENPBP07199 599 aaPredicted RBP21.45■■□□□ 1.02
MC1R-201ENST00000539976 BAZ1AQ9NRL2 1556 aaPredicted RBP21.43■■□□□ 1.02
MC1R-201ENST00000539976 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.43■■□□□ 1.02
MC1R-201ENST00000539976 CCER1Q8TC90 406 aaPredicted RBP21.4■■□□□ 1.02
MC1R-201ENST00000539976 DIEXFQ68CQ4 756 aaKnown RBP21.39■■□□□ 1.01
MC1R-201ENST00000539976 EHMT2Q96KQ7 1210 aa21.39■■□□□ 1.01
MC1R-201ENST00000539976 BICRAQ9NZM4 1560 aa21.36■■□□□ 1.01
MC1R-201ENST00000539976 PABPN1Q86U42 306 aaKnown RBP eCLIP21.32■■□□□ 1
MC1R-201ENST00000539976 SMARCA4P51532 1647 aa21.32■■□□□ 1
MC1R-201ENST00000539976 TOP2AP11388 1531 aaKnown RBP21.17■□□□□ 0.98
MC1R-201ENST00000539976 EIF4G1Q04637 1599 aaKnown RBP21.06■□□□□ 0.96
MC1R-201ENST00000539976 ZNF316A6NFI3 1004 aaPredicted RBP21.04■□□□□ 0.96
MC1R-201ENST00000539976 WRNQ14191 1432 aaPredicted RBP eCLIP21.03■□□□□ 0.96
MC1R-201ENST00000539976 SMARCA2P51531 1590 aa21.03■□□□□ 0.96
MC1R-201ENST00000539976 CCDC88BA6NC98 1476 aa21.01■□□□□ 0.95
MC1R-201ENST00000539976 PEG3Q9GZU2 1588 aa20.94■□□□□ 0.94
MC1R-201ENST00000539976 YTHDC1Q96MU7 727 aaKnown RBP20.94■□□□□ 0.94
MC1R-201ENST00000539976 TTBK1Q5TCY1 1321 aaPredicted RBP20.89■□□□□ 0.94
MC1R-201ENST00000539976 CEP162Q5TB80 1403 aa20.87■□□□□ 0.93
MC1R-201ENST00000539976 ATAD2BQ9ULI0 1458 aa20.85■□□□□ 0.93
MC1R-201ENST00000539976 MIER1Q8N108 512 aa20.84■□□□□ 0.93
MC1R-201ENST00000539976 ABCC8Q09428 1581 aa20.83■□□□□ 0.92
MC1R-201ENST00000539976 BAZ1BQ9UIG0 1483 aaKnown RBP20.77■□□□□ 0.92
MC1R-201ENST00000539976 TNIKQ9UKE5 1360 aa20.77■□□□□ 0.91
MC1R-201ENST00000539976 SOGA1O94964 1423 aa20.63■□□□□ 0.89
MC1R-201ENST00000539976 EEA1Q15075 1411 aa20.6■□□□□ 0.89
MC1R-201ENST00000539976 CLSPNQ9HAW4 1339 aa20.59■□□□□ 0.89
MC1R-201ENST00000539976 UBTFP17480 764 aaKnown RBP20.55■□□□□ 0.88
MC1R-201ENST00000539976 CSRNP3Q8WYN3 585 aa20.55■□□□□ 0.88
MC1R-201ENST00000539976 HNRNPUL2Q1KMD3 747 aaKnown RBP20.54■□□□□ 0.88
MC1R-201ENST00000539976 GOLGA3Q08378 1498 aa20.53■□□□□ 0.88
MC1R-201ENST00000539976 HMGXB3Q12766 1538 aa20.53■□□□□ 0.88
MC1R-201ENST00000539976 SUPT16HQ9Y5B9 1047 aaKnown RBP20.51■□□□□ 0.87
MC1R-201ENST00000539976 NCAPD3P42695 1498 aa20.51■□□□□ 0.87
MC1R-201ENST00000539976 RUSC2Q8N2Y8 1516 aa20.51■□□□□ 0.87
MC1R-201ENST00000539976 SYNJ1O43426 1573 aa20.48■□□□□ 0.87
MC1R-201ENST00000539976 TSHZ2Q9NRE2 1034 aa20.39■□□□□ 0.85
MC1R-201ENST00000539976 ANP32EQ9BTT0 268 aa20.38■□□□□ 0.85
MC1R-201ENST00000539976 CEP164Q9UPV0 1460 aa20.33■□□□□ 0.84
MC1R-201ENST00000539976 VPS8Q8N3P4 1428 aa20.33■□□□□ 0.84
MC1R-201ENST00000539976 CLIP1P30622 1438 aa20.32■□□□□ 0.84
MC1R-201ENST00000539976 KIF21BO75037 1637 aa20.32■□□□□ 0.84
MC1R-201ENST00000539976 TOP2BQ02880 1626 aa20.26■□□□□ 0.83
MC1R-201ENST00000539976 CC2D2AQ9P2K1 1620 aa20.26■□□□□ 0.83
MC1R-201ENST00000539976 DHX57Q6P158 1386 aaKnown RBP20.25■□□□□ 0.83
MC1R-201ENST00000539976 APLP2Q06481 763 aa20.25■□□□□ 0.83
MC1R-201ENST00000539976 BIVM-ERCC5R4GMW8 1640 aa20.23■□□□□ 0.83
MC1R-201ENST00000539976 CFTRP13569 1480 aa20.23■□□□□ 0.83
MC1R-201ENST00000539976 BCL11AQ9H165 835 aa20.21■□□□□ 0.83
MC1R-201ENST00000539976 CUX1P39880 1505 aa20.16■□□□□ 0.82
MC1R-201ENST00000539976 PRDM2Q13029 1718 aa20.12■□□□□ 0.81
MC1R-201ENST00000539976 RAPGEF2Q9Y4G8 1499 aa20.1■□□□□ 0.81
MC1R-201ENST00000539976 CADPSQ9ULU8 1353 aa20.07■□□□□ 0.8
MC1R-201ENST00000539976 KCNH8Q96L42 1107 aa20.02■□□□□ 0.8
MC1R-201ENST00000539976 BCANQ96GW7 911 aa20■□□□□ 0.79
MC1R-201ENST00000539976 RANGAP1P46060 587 aaPredicted RBP19.99■□□□□ 0.79
MC1R-201ENST00000539976 CUX2O14529 1486 aa19.98■□□□□ 0.79
MC1R-201ENST00000539976 FKBP8Q14318 412 aa19.97■□□□□ 0.79
MC1R-201ENST00000539976 RRBP1Q9P2E9 1410 aaKnown RBP19.97■□□□□ 0.79
MC1R-201ENST00000539976 DNAJC5BQ9UF47 199 aa19.97■□□□□ 0.79
MC1R-201ENST00000539976 ARAP1Q96P48 1450 aa19.92■□□□□ 0.78
MC1R-201ENST00000539976 KANK4Q5T7N3 995 aaPredicted RBP19.92■□□□□ 0.78
MC1R-201ENST00000539976 KIF27Q86VH2 1401 aa19.92■□□□□ 0.78
MC1R-201ENST00000539976 RBM19Q9Y4C8 960 aaKnown RBP19.92■□□□□ 0.78
MC1R-201ENST00000539976 PRXQ9BXM0 1461 aa19.91■□□□□ 0.78
MC1R-201ENST00000539976 FANCD2Q9BXW9 1451 aa19.9■□□□□ 0.78
MC1R-201ENST00000539976 ERICH3Q5RHP9 1530 aa19.89■□□□□ 0.77
MC1R-201ENST00000539976 NESP48681 1621 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms