RNA–Protein interactions for RNA: ENST00000329908.12

IST1-201, Transcript of IST1, ESCRT-III associated factor, humanhuman

TSL 1 (best) BASIC

Gene IST1, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IST1-201ENST00000329908 NISCHQ9Y2I1 1504 aa25.27■■□□□ 1.64
IST1-201ENST00000329908 CCDC180Q9P1Z9 1646 aa22.03■■□□□ 1.12
IST1-201ENST00000329908 ZCCHC6Q5VYS8 1495 aaKnown RBP21.22■□□□□ 0.99
IST1-201ENST00000329908 DCAF8L2P0C7V8 631 aa20.99■□□□□ 0.95
IST1-201ENST00000329908 ABCC9O60706 1549 aa20.96■□□□□ 0.95
IST1-201ENST00000329908 DCAF1Q9Y4B6 1507 aa20.86■□□□□ 0.93
IST1-201ENST00000329908 SHROOM4Q9ULL8 1493 aa20.66■□□□□ 0.9
IST1-201ENST00000329908 MYO15BQ96JP2 1530 aa20.62■□□□□ 0.89
IST1-201ENST00000329908 NACADO15069 1562 aa20.54■□□□□ 0.88
IST1-201ENST00000329908 RB1CC1Q8TDY2 1594 aa20.39■□□□□ 0.85
IST1-201ENST00000329908 SCRIBQ14160 1630 aa20.32■□□□□ 0.84
IST1-201ENST00000329908 UNC13AQ9UPW8 1703 aa19.99■□□□□ 0.79
IST1-201ENST00000329908 SUPT5HO00267 1087 aaKnown RBP19.86■□□□□ 0.77
IST1-201ENST00000329908 BICRAQ9NZM4 1560 aa19.78■□□□□ 0.76
IST1-201ENST00000329908 PABPN1Q86U42 306 aaKnown RBP eCLIP19.78■□□□□ 0.76
IST1-201ENST00000329908 CECR2Q9BXF3 1484 aa19.67■□□□□ 0.74
IST1-201ENST00000329908 RSF1Q96T23 1441 aaPredicted RBP19.6■□□□□ 0.73
IST1-201ENST00000329908 MROH2BQ7Z745 1585 aa19.54■□□□□ 0.72
IST1-201ENST00000329908 BAZ1AQ9NRL2 1556 aaPredicted RBP19.52■□□□□ 0.72
IST1-201ENST00000329908 SMARCA4P51532 1647 aa19.44■□□□□ 0.7
IST1-201ENST00000329908 WIZO95785 1651 aa19.38■□□□□ 0.69
IST1-201ENST00000329908 EIF4G1Q04637 1599 aaKnown RBP19.2■□□□□ 0.66
IST1-201ENST00000329908 PEG3Q9GZU2 1588 aa19.18■□□□□ 0.66
IST1-201ENST00000329908 TOP2AP11388 1531 aaKnown RBP19.16■□□□□ 0.66
IST1-201ENST00000329908 ATAD2BQ9ULI0 1458 aa19.14■□□□□ 0.65
IST1-201ENST00000329908 SMARCA2P51531 1590 aa19.12■□□□□ 0.65
IST1-201ENST00000329908 BAZ1BQ9UIG0 1483 aaKnown RBP19.04■□□□□ 0.64
IST1-201ENST00000329908 CCDC88BA6NC98 1476 aa18.98■□□□□ 0.63
IST1-201ENST00000329908 NCAPD3P42695 1498 aa18.97■□□□□ 0.63
IST1-201ENST00000329908 CC2D2AQ9P2K1 1620 aa18.94■□□□□ 0.62
IST1-201ENST00000329908 CHIC1Q5VXU3 224 aa18.93■□□□□ 0.62
IST1-201ENST00000329908 HMGXB3Q12766 1538 aa18.93■□□□□ 0.62
IST1-201ENST00000329908 TRIM41Q8WV44 630 aa18.65■□□□□ 0.58
IST1-201ENST00000329908 ABCC8Q09428 1581 aa18.59■□□□□ 0.57
IST1-201ENST00000329908 CFTRP13569 1480 aa18.55■□□□□ 0.56
IST1-201ENST00000329908 HRCP23327 699 aa18.55■□□□□ 0.56
IST1-201ENST00000329908 DNAJC5BQ9UF47 199 aa18.53■□□□□ 0.56
IST1-201ENST00000329908 CADPSQ9ULU8 1353 aa18.5■□□□□ 0.55
IST1-201ENST00000329908 WRNQ14191 1432 aaPredicted RBP eCLIP18.46■□□□□ 0.55
IST1-201ENST00000329908 PRDM2Q13029 1718 aa18.42■□□□□ 0.54
IST1-201ENST00000329908 NESP48681 1621 aa18.38■□□□□ 0.53
IST1-201ENST00000329908 PCGF6Q9BYE7 350 aa18.38■□□□□ 0.53
IST1-201ENST00000329908 SYNJ1O43426 1573 aa18.38■□□□□ 0.53
IST1-201ENST00000329908 FAM9AQ8IZU1 332 aaPredicted RBP18.34■□□□□ 0.53
IST1-201ENST00000329908 LAMC3Q9Y6N6 1575 aa18.34■□□□□ 0.53
IST1-201ENST00000329908 FANCD2Q9BXW9 1451 aa18.3■□□□□ 0.52
IST1-201ENST00000329908 TOP2BQ02880 1626 aa18.29■□□□□ 0.52
IST1-201ENST00000329908 CUX1P39880 1505 aa18.27■□□□□ 0.51
IST1-201ENST00000329908 BIVM-ERCC5R4GMW8 1640 aa18.26■□□□□ 0.51
IST1-201ENST00000329908 LOC105371045A0A1W2PR82 267 aa18.24■□□□□ 0.51
IST1-201ENST00000329908 SOGA1O94964 1423 aa18.23■□□□□ 0.51
IST1-201ENST00000329908 PDS5BQ9NTI5 1447 aa18.21■□□□□ 0.51
IST1-201ENST00000329908 CEP164Q9UPV0 1460 aa18.19■□□□□ 0.5
IST1-201ENST00000329908 RUSC2Q8N2Y8 1516 aa18.16■□□□□ 0.5
IST1-201ENST00000329908 KIF21AQ7Z4S6 1674 aa18.14■□□□□ 0.49
IST1-201ENST00000329908 EEA1Q15075 1411 aa18.13■□□□□ 0.49
IST1-201ENST00000329908 EHMT2Q96KQ7 1210 aa18.12■□□□□ 0.49
IST1-201ENST00000329908 DNMBPQ6XZF7 1577 aa18.11■□□□□ 0.49
IST1-201ENST00000329908 TOPBP1Q92547 1522 aa18.09■□□□□ 0.49
IST1-201ENST00000329908 FGD5Q6ZNL6 1462 aa18.09■□□□□ 0.49
IST1-201ENST00000329908 TRIM26Q12899 539 aaPredicted RBP18.08■□□□□ 0.48
IST1-201ENST00000329908 CSRNP3Q8WYN3 585 aa18.08■□□□□ 0.48
IST1-201ENST00000329908 URB2Q14146 1524 aaKnown RBP18.07■□□□□ 0.48
IST1-201ENST00000329908 POLA1P09884 1462 aaPredicted RBP18.01■□□□□ 0.47
IST1-201ENST00000329908 PPARGC1BQ86YN6 1023 aaKnown RBP17.99■□□□□ 0.47
IST1-201ENST00000329908 KIF27Q86VH2 1401 aa17.99■□□□□ 0.47
IST1-201ENST00000329908 ERCC6Q03468 1493 aa17.98■□□□□ 0.47
IST1-201ENST00000329908 CUX2O14529 1486 aa17.97■□□□□ 0.47
IST1-201ENST00000329908 MRC2Q9UBG0 1479 aa17.97■□□□□ 0.47
IST1-201ENST00000329908 RAD54L2Q9Y4B4 1467 aa17.96■□□□□ 0.47
IST1-201ENST00000329908 ABCA10Q8WWZ4 1543 aa17.91■□□□□ 0.46
IST1-201ENST00000329908 GOLGA3Q08378 1498 aa17.91■□□□□ 0.46
IST1-201ENST00000329908 KIF21BO75037 1637 aa17.9■□□□□ 0.46
IST1-201ENST00000329908 UBTFP17480 764 aaKnown RBP17.88■□□□□ 0.45
IST1-201ENST00000329908 WDR62O43379 1518 aa17.87■□□□□ 0.45
IST1-201ENST00000329908 ZEB1P37275 1124 aaPredicted RBP17.87■□□□□ 0.45
IST1-201ENST00000329908 RAPGEF2Q9Y4G8 1499 aa17.86■□□□□ 0.45
IST1-201ENST00000329908 PRXQ9BXM0 1461 aa17.84■□□□□ 0.45
IST1-201ENST00000329908 WDR97A6NE52 1622 aa17.84■□□□□ 0.45
IST1-201ENST00000329908 IGF1RP08069 1367 aa17.84■□□□□ 0.45
IST1-201ENST00000329908 THOC2Q8NI27 1593 aaKnown RBP17.84■□□□□ 0.45
IST1-201ENST00000329908 TNIKQ9UKE5 1360 aa17.83■□□□□ 0.45
IST1-201ENST00000329908 TARBP1Q13395 1621 aaKnown RBP17.81■□□□□ 0.44
IST1-201ENST00000329908 TDRD9Q8NDG6 1382 aaKnown RBP17.81■□□□□ 0.44
IST1-201ENST00000329908 ERICH3Q5RHP9 1530 aa17.8■□□□□ 0.44
IST1-201ENST00000329908 ABCA5Q8WWZ7 1642 aa17.76■□□□□ 0.43
IST1-201ENST00000329908 CEP162Q5TB80 1403 aa17.76■□□□□ 0.43
IST1-201ENST00000329908 CARMIL1Q5VZK9 1371 aa17.76■□□□□ 0.43
IST1-201ENST00000329908 GAPVD1Q14C86 1478 aa17.75■□□□□ 0.43
IST1-201ENST00000329908 IFT140Q96RY7 1462 aa17.75■□□□□ 0.43
IST1-201ENST00000329908 AQRO60306 1485 aaKnown RBP eCLIP17.69■□□□□ 0.422e-7■■■■□ 21.2
IST1-201ENST00000329908 CUL7Q14999 1698 aa17.68■□□□□ 0.42
IST1-201ENST00000329908 ZNF608Q9ULD9 1512 aaPredicted RBP17.68■□□□□ 0.42
IST1-201ENST00000329908 RANGAP1P46060 587 aaPredicted RBP17.65■□□□□ 0.42
IST1-201ENST00000329908 PBRM1Q86U86 1689 aa17.64■□□□□ 0.41
IST1-201ENST00000329908 CLIP1P30622 1438 aa17.63■□□□□ 0.41
IST1-201ENST00000329908 GRIN2BQ13224 1484 aa17.61■□□□□ 0.41
IST1-201ENST00000329908 EIF4G3O43432 1585 aaKnown RBP17.61■□□□□ 0.41
IST1-201ENST00000329908 FHAD1B1AJZ9 1412 aa17.55■□□□□ 0.4
IST1-201ENST00000329908 ADAMTS12P58397 1594 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms