Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 RNA5SP145-201ENST00000363124 125 ntBASIC9.62□□□□□ -0.879e-42■■□□□ 12.9
XRCC6P12956 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.943e-11■■□□□ 12.9
XRCC6P12956 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.249e-42■■□□□ 12.9
XRCC6P12956 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC6.01□□□□□ -1.459e-42■■□□□ 12.9
XRCC6P12956 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.32e-6■■□□□ 12.8
XRCC6P12956 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.33■□□□□ 0.26e-21■■□□□ 12.8
XRCC6P12956 GAS5-222ENST00000451607 1007 ntTSL 5 BASIC12.68□□□□□ -0.386e-21■■□□□ 12.8
XRCC6P12956 GAS5-224ENST00000454068 688 ntTSL 5 BASIC11.11□□□□□ -0.636e-21■■□□□ 12.8
XRCC6P12956 GAS5-214ENST00000436656 822 ntTSL 310.63□□□□□ -0.716e-21■■□□□ 12.8
XRCC6P12956 GAS5-216ENST00000443799 897 ntTSL 510.63□□□□□ -0.716e-21■■□□□ 12.8
XRCC6P12956 GAS5-210ENST00000431268 1698 ntTSL 29.79□□□□□ -0.846e-21■■□□□ 12.8
XRCC6P12956 GAS5-203ENST00000416952 799 ntTSL 29.13□□□□□ -0.956e-21■■□□□ 12.8
XRCC6P12956 GAS5-219ENST00000449289 542 ntTSL 3 BASIC9.03□□□□□ -0.966e-21■■□□□ 12.8
XRCC6P12956 GAS5-220ENST00000449589 712 ntTSL 39.03□□□□□ -0.966e-21■■□□□ 12.8
XRCC6P12956 GAS5-226ENST00000455838 632 ntTSL 29.03□□□□□ -0.966e-21■■□□□ 12.8
XRCC6P12956 GAS5-211ENST00000432536 959 ntTSL 2 BASIC8.72□□□□□ -1.016e-21■■□□□ 12.8
XRCC6P12956 GAS5-227ENST00000456293 583 ntTSL 38.06□□□□□ -1.126e-21■■□□□ 12.8
XRCC6P12956 GAS5-228ENST00000456812 723 ntTSL 37.57□□□□□ -1.26e-21■■□□□ 12.8
XRCC6P12956 GAS5-206ENST00000422183 745 ntTSL 26.89□□□□□ -1.316e-21■■□□□ 12.8
XRCC6P12956 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.63□□□□□ -1.356e-21■■□□□ 12.8
XRCC6P12956 GAS5-201ENST00000412059 979 ntTSL 56.15□□□□□ -1.426e-21■■□□□ 12.8
XRCC6P12956 GAS5-215ENST00000442067 1114 ntTSL 25.49□□□□□ -1.536e-21■■□□□ 12.8
XRCC6P12956 GAS5-205ENST00000422008 497 ntTSL 35.35□□□□□ -1.556e-21■■□□□ 12.8
XRCC6P12956 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.87□□□□□ -1.636e-21■■□□□ 12.8
XRCC6P12956 GAS5-204ENST00000421068 1060 ntTSL 24.79□□□□□ -1.646e-21■■□□□ 12.8
XRCC6P12956 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.69□□□□□ -1.666e-21■■□□□ 12.8
XRCC6P12956 GAS5-229ENST00000458220 469 ntTSL 24.01□□□□□ -1.776e-21■■□□□ 12.8
XRCC6P12956 GAS5-213ENST00000436285 772 ntTSL 23.98□□□□□ -1.776e-21■■□□□ 12.8
XRCC6P12956 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.31□□□□□ -1.886e-21■■□□□ 12.8
XRCC6P12956 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC15.24■□□□□ 0.031e-6■■□□□ 12.8
XRCC6P12956 PPIA-210ENST00000620047 827 ntTSL 5 BASIC15.24■□□□□ 0.031e-6■■□□□ 12.8
XRCC6P12956 PPIA-208ENST00000489459 907 ntTSL 2 BASIC15.24■□□□□ 0.031e-6■■□□□ 12.8
XRCC6P12956 PPIA-205ENST00000479021 552 ntTSL 411.73□□□□□ -0.531e-6■■□□□ 12.8
XRCC6P12956 PPIA-202ENST00000415933 863 ntTSL 210.16□□□□□ -0.781e-6■■□□□ 12.8
XRCC6P12956 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.891e-6■■□□□ 12.8
XRCC6P12956 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.99□□□□□ -1.291e-6■■□□□ 12.8
XRCC6P12956 PPIA-207ENST00000481437 570 ntTSL 26.99□□□□□ -1.291e-6■■□□□ 12.8
XRCC6P12956 ANKRD28-203ENST00000439830 592 ntTSL 528.03■■■□□ 2.085e-9■■□□□ 12.8
XRCC6P12956 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.55e-9■■□□□ 12.8
XRCC6P12956 ANKRD28-202ENST00000412318 4408 ntTSL 25.07□□□□□ -1.65e-9■■□□□ 12.8
XRCC6P12956 GOLGA3-207ENST00000545875 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.254e-6■■□□□ 12.8
XRCC6P12956 MAN2A2-228ENST00000561047 1057 ntTSL 520.01■□□□□ 0.794e-6■■□□□ 12.7
XRCC6P12956 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.195e-13■■□□□ 12.7
XRCC6P12956 PIP5K1A-205ENST00000418435 353 ntTSL 55.95□□□□□ -1.461e-7■■□□□ 12.7
XRCC6P12956 AC011476.3-201ENST00000593060 786 ntTSL 5 BASIC9.11□□□□□ -0.954e-6■■□□□ 12.7
XRCC6P12956 COL18A1-201ENST00000342220 3386 ntTSL 215.84■□□□□ 0.135e-11■■□□□ 12.7
XRCC6P12956 AC016723.1-202ENST00000436982 643 ntTSL 5 BASIC10.03□□□□□ -0.82e-6■■□□□ 12.7
XRCC6P12956 MT-TI-201ENST00000387365 69 ntBASIC1.28□□□□□ -2.21e-31■■□□□ 12.7
XRCC6P12956 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.2■□□□□ 0.981e-8■■□□□ 12.6
XRCC6P12956 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.761e-8■■□□□ 12.6
XRCC6P12956 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.651e-8■■□□□ 12.6
XRCC6P12956 ATP2A3-212ENST00000572694 894 ntTSL 219.03■□□□□ 0.641e-8■■□□□ 12.6
XRCC6P12956 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC18.8■□□□□ 0.61e-8■■□□□ 12.6
XRCC6P12956 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC18.2■□□□□ 0.51e-8■■□□□ 12.6
XRCC6P12956 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC15.92■□□□□ 0.141e-8■■□□□ 12.6
XRCC6P12956 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.897e-7■■□□□ 12.6
XRCC6P12956 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC17.47■□□□□ 0.397e-7■■□□□ 12.6
XRCC6P12956 FGL1-204ENST00000398056 1967 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.271e-7■■□□□ 12.6
XRCC6P12956 ARHGAP19-SLIT1-202ENST00000479633 1876 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.369e-6■■□□□ 12.6
XRCC6P12956 ARHGAP19-201ENST00000358308 5390 ntTSL 1 (best) BASIC10.94□□□□□ -0.669e-6■■□□□ 12.6
XRCC6P12956 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.789e-6■■□□□ 12.6
XRCC6P12956 ARHGAP19-206ENST00000492211 5525 ntTSL 29.37□□□□□ -0.919e-6■■□□□ 12.6
XRCC6P12956 ARHGAP19-205ENST00000487035 4553 ntTSL 28.1□□□□□ -1.119e-6■■□□□ 12.6
XRCC6P12956 CKB-206ENST00000553994 746 ntTSL 232.72■■■□□ 2.836e-8■■□□□ 12.6
XRCC6P12956 CKB-216ENST00000557530 523 ntTSL 414.92□□□□□ -0.026e-8■■□□□ 12.6
XRCC6P12956 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.888e-6■■□□□ 12.6
XRCC6P12956 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC30.95■■■□□ 2.558e-6■■□□□ 12.6
XRCC6P12956 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.24■■■□□ 2.438e-6■■□□□ 12.6
XRCC6P12956 RETREG2-201ENST00000273048 2533 ntTSL 1 (best)30.1■■■□□ 2.418e-6■■□□□ 12.6
XRCC6P12956 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC29.93■■■□□ 2.388e-6■■□□□ 12.6
XRCC6P12956 TAL1-203ENST00000459729 1796 ntTSL 1 (best)29.13■■■□□ 2.254e-12■■□□□ 12.6
XRCC6P12956 RETREG2-207ENST00000452293 609 ntTSL 428.97■■■□□ 2.238e-6■■□□□ 12.6
XRCC6P12956 DGAT1-207ENST00000531896 981 ntTSL 328.06■■■□□ 2.088e-6■■□□□ 12.6
XRCC6P12956 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.74■■□□□ 1.878e-6■■□□□ 12.6
XRCC6P12956 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.43■■□□□ 1.828e-6■■□□□ 12.6
XRCC6P12956 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.38■■□□□ 1.818e-6■■□□□ 12.6
XRCC6P12956 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC25.76■■□□□ 1.718e-6■■□□□ 12.6
XRCC6P12956 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.78e-6■■□□□ 12.6
XRCC6P12956 VAPA-205ENST00000578314 532 ntTSL 325.64■■□□□ 1.78e-6■■□□□ 12.6
XRCC6P12956 TRAF4-211ENST00000478021 718 ntTSL 325.31■■□□□ 1.643e-10■■□□□ 12.6
XRCC6P12956 EMD-205ENST00000471965 800 ntTSL 225.1■■□□□ 1.612e-7■■□□□ 12.6
XRCC6P12956 TRAF4-207ENST00000461195 787 ntTSL 225.09■■□□□ 1.613e-10■■□□□ 12.6
XRCC6P12956 TRAF4-204ENST00000422344 631 ntTSL 324.39■■□□□ 1.493e-10■■□□□ 12.6
XRCC6P12956 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.34■■□□□ 1.493e-10■■□□□ 12.6
XRCC6P12956 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.34■■□□□ 1.493e-10■■□□□ 12.6
XRCC6P12956 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.67■■□□□ 1.388e-6■■□□□ 12.6
XRCC6P12956 RENBP-203ENST00000423624 1304 ntTSL 523.5■■□□□ 1.358e-6■■□□□ 12.6
XRCC6P12956 TRAF4-203ENST00000394925 702 ntTSL 223.36■■□□□ 1.333e-10■■□□□ 12.6
XRCC6P12956 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.318e-6■■□□□ 12.6
XRCC6P12956 DGAT1-204ENST00000525371 840 ntTSL 522.91■■□□□ 1.268e-6■■□□□ 12.6
XRCC6P12956 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.258e-6■■□□□ 12.6
XRCC6P12956 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.233e-10■■□□□ 12.6
XRCC6P12956 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.218e-6■■□□□ 12.6
XRCC6P12956 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.57■■□□□ 1.28e-6■■□□□ 12.6
XRCC6P12956 PILRB-210ENST00000457519 2074 ntTSL 1 (best)22.48■■□□□ 1.198e-6■■□□□ 12.6
XRCC6P12956 EFTUD2-217ENST00000590124 899 ntTSL 322.21■■□□□ 1.158e-6■■□□□ 12.6
XRCC6P12956 ULK1-204ENST00000540647 1211 ntTSL 221.92■■□□□ 1.18e-6■■□□□ 12.6
XRCC6P12956 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.098e-6■■□□□ 12.6
XRCC6P12956 PILRB-202ENST00000422808 1599 ntTSL 1 (best)21.86■■□□□ 1.098e-6■■□□□ 12.6
XRCC6P12956 PILRB-204ENST00000438028 1822 ntTSL 1 (best)21.77■■□□□ 1.088e-6■■□□□ 12.6
Retrieved 100 of 6,788 protein–RNA pairs in 48.4 ms