RNA–Protein interactions for RNA: ENST00000306329.15

MTCL1-201, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MTCL1, Length 5,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-201ENST00000306329 DCAF8L2P0C7V8 631 aa35.07■■■■□ 3.2
MTCL1-201ENST00000306329 SUPT5HO00267 1087 aaKnown RBP33.4■■■□□ 2.94
MTCL1-201ENST00000306329 EHMT2Q96KQ7 1210 aa32.74■■■□□ 2.83
MTCL1-201ENST00000306329 PELP1Q8IZL8 1130 aaKnown RBP32.71■■■□□ 2.83
MTCL1-201ENST00000306329 SHROOM4Q9ULL8 1493 aa32.55■■■□□ 2.8
MTCL1-201ENST00000306329 APLP2Q06481 763 aa32.08■■■□□ 2.73
MTCL1-201ENST00000306329 NISCHQ9Y2I1 1504 aa31.93■■■□□ 2.7
MTCL1-201ENST00000306329 TTBK1Q5TCY1 1321 aaPredicted RBP31.7■■■□□ 2.66
MTCL1-201ENST00000306329 FAM9AQ8IZU1 332 aaPredicted RBP31.66■■■□□ 2.66
MTCL1-201ENST00000306329 PCGF6Q9BYE7 350 aa31.53■■■□□ 2.64
MTCL1-201ENST00000306329 ERICH6Q7L0X2 663 aa31.5■■■□□ 2.63
MTCL1-201ENST00000306329 CENPBP07199 599 aaPredicted RBP31.34■■■□□ 2.61
MTCL1-201ENST00000306329 CCER1Q8TC90 406 aaPredicted RBP31.25■■■□□ 2.59
MTCL1-201ENST00000306329 RANGAP1P46060 587 aaPredicted RBP31.19■■■□□ 2.58
MTCL1-201ENST00000306329 ZEB1P37275 1124 aaPredicted RBP31.04■■■□□ 2.56
MTCL1-201ENST00000306329 ATP1B4Q9UN42 357 aaPredicted RBP30.94■■■□□ 2.54
MTCL1-201ENST00000306329 TRIM41Q8WV44 630 aa30.81■■■□□ 2.52
MTCL1-201ENST00000306329 NEFLP07196 543 aa30.78■■■□□ 2.52
MTCL1-201ENST00000306329 YTHDC1Q96MU7 727 aaKnown RBP30.74■■■□□ 2.51
MTCL1-201ENST00000306329 UBTFP17480 764 aaKnown RBP30.62■■■□□ 2.49
MTCL1-201ENST00000306329 MYT1Q01538 1121 aa30.42■■■□□ 2.46
MTCL1-201ENST00000306329 PPARGC1BQ86YN6 1023 aaKnown RBP30.29■■■□□ 2.44
MTCL1-201ENST00000306329 DAXXQ9UER7 740 aaPredicted RBP30.04■■■□□ 2.4
MTCL1-201ENST00000306329 POLR3GLQ9BT43 218 aa29.95■■■□□ 2.39
MTCL1-201ENST00000306329 TRIM26Q12899 539 aaPredicted RBP29.95■■■□□ 2.38
MTCL1-201ENST00000306329 ITGAEP38570 1179 aa29.88■■■□□ 2.37
MTCL1-201ENST00000306329 HRCP23327 699 aa29.8■■■□□ 2.36
MTCL1-201ENST00000306329 MYT1LQ9UL68 1186 aa29.78■■■□□ 2.36
MTCL1-201ENST00000306329 CNGB1Q14028 1251 aaPredicted RBP29.71■■■□□ 2.35
MTCL1-201ENST00000306329 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.7■■■□□ 2.35
MTCL1-201ENST00000306329 HNRNPUL2Q1KMD3 747 aaKnown RBP29.7■■■□□ 2.35
MTCL1-201ENST00000306329 LOC105371045A0A1W2PR82 267 aa29.45■■■□□ 2.3
MTCL1-201ENST00000306329 SLC4A1APQ9BWU0 796 aaKnown RBP29.37■■■□□ 2.29
MTCL1-201ENST00000306329 CHIC1Q5VXU3 224 aa29.35■■■□□ 2.29
MTCL1-201ENST00000306329 RTL5Q5HYW3 569 aaPredicted RBP29.35■■■□□ 2.29
MTCL1-201ENST00000306329 ZNF316A6NFI3 1004 aaPredicted RBP29.33■■■□□ 2.29
MTCL1-201ENST00000306329 CLSPNQ9HAW4 1339 aa29.31■■■□□ 2.28
MTCL1-201ENST00000306329 DIEXFQ68CQ4 756 aaKnown RBP29.18■■■□□ 2.26
MTCL1-201ENST00000306329 FAM50AQ14320 339 aaKnown RBP28.98■■■□□ 2.23
MTCL1-201ENST00000306329 BCANQ96GW7 911 aa28.93■■■□□ 2.22
MTCL1-201ENST00000306329 TRIM52Q96A61 297 aa28.9■■■□□ 2.22
MTCL1-201ENST00000306329 NEUROD1Q13562 356 aa28.86■■■□□ 2.21
MTCL1-201ENST00000306329 GTF3C3Q9Y5Q9 886 aa28.73■■■□□ 2.19
MTCL1-201ENST00000306329 ZNF326Q5BKZ1 582 aaKnown RBP28.68■■■□□ 2.18
MTCL1-201ENST00000306329 CDK11AQ9UQ88 783 aaPredicted RBP28.68■■■□□ 2.18
MTCL1-201ENST00000306329 ANP32CO43423 234 aa28.67■■■□□ 2.18
MTCL1-201ENST00000306329 ZBTB47Q9UFB7 747 aaPredicted RBP28.66■■■□□ 2.18
MTCL1-201ENST00000306329 BCL11AQ9H165 835 aa28.53■■■□□ 2.16
MTCL1-201ENST00000306329 CANXP27824 592 aaKnown RBP28.48■■■□□ 2.15
MTCL1-201ENST00000306329 SLC24A1O60721 1099 aa28.43■■■□□ 2.14
MTCL1-201ENST00000306329 ANP32AP39687 249 aaKnown RBP28.25■■■□□ 2.11
MTCL1-201ENST00000306329 NEFMP07197 916 aa28.25■■■□□ 2.11
MTCL1-201ENST00000306329 NPM2Q86SE8 214 aaKnown RBP28.19■■■□□ 2.1
MTCL1-201ENST00000306329 PABPN1Q86U42 306 aaKnown RBP eCLIP28.19■■■□□ 2.1
MTCL1-201ENST00000306329 FBLN2P98095 1184 aa28.19■■■□□ 2.1
MTCL1-201ENST00000306329 ACIN1Q9UKV3 1341 aaKnown RBP28.15■■■□□ 2.1
MTCL1-201ENST00000306329 ARID3CA6NKF2 412 aa28.08■■■□□ 2.09
MTCL1-201ENST00000306329 P3H3Q8IVL6 736 aa28.05■■■□□ 2.08
MTCL1-201ENST00000306329 EIF5BO60841 1220 aaKnown RBP27.96■■■□□ 2.07
MTCL1-201ENST00000306329 ZNF777Q9ULD5 760 aaPredicted RBP27.94■■■□□ 2.06
MTCL1-201ENST00000306329 FKBP8Q14318 412 aa27.93■■■□□ 2.06
MTCL1-201ENST00000306329 ANP32BQ92688 251 aaKnown RBP27.92■■■□□ 2.06
MTCL1-201ENST00000306329 HSP90AA1P07900 732 aaKnown RBP27.89■■■□□ 2.06
MTCL1-201ENST00000306329 ABCC9O60706 1549 aa27.85■■■□□ 2.05
MTCL1-201ENST00000306329 HNRNPUQ00839 825 aaKnown RBP eCLIP27.78■■■□□ 2.04
MTCL1-201ENST00000306329 UPF2Q9HAU5 1272 aaKnown RBP27.77■■■□□ 2.04
MTCL1-201ENST00000306329 CSRNP3Q8WYN3 585 aa27.77■■■□□ 2.04
MTCL1-201ENST00000306329 FAM9BQ8IZU0 186 aa27.73■■■□□ 2.03
MTCL1-201ENST00000306329 TONSLQ96HA7 1378 aa27.72■■■□□ 2.03
MTCL1-201ENST00000306329 SALL2Q9Y467 1007 aaPredicted RBP27.7■■■□□ 2.02
MTCL1-201ENST00000306329 CHGAP10645 457 aaKnown RBP27.69■■■□□ 2.02
MTCL1-201ENST00000306329 DDX10Q13206 875 aaKnown RBP27.65■■■□□ 2.02
MTCL1-201ENST00000306329 ESF1Q9H501 851 aaKnown RBP27.61■■■□□ 2.01
MTCL1-201ENST00000306329 STAG3Q9UJ98 1225 aa27.59■■■□□ 2.01
MTCL1-201ENST00000306329 NBR1Q14596 966 aa27.58■■■□□ 2.01
MTCL1-201ENST00000306329 CCDC136Q96JN2 1154 aa27.56■■■□□ 2
MTCL1-201ENST00000306329 ARXQ96QS3 562 aa27.55■■■□□ 2
MTCL1-201ENST00000306329 GLIPR1L2Q4G1C9 344 aa27.5■■□□□ 1.99
MTCL1-201ENST00000306329 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.5■■□□□ 1.99
MTCL1-201ENST00000306329 TMC1Q8TDI8 760 aa27.5■■□□□ 1.99
MTCL1-201ENST00000306329 PLPPR3Q6T4P5 718 aa27.48■■□□□ 1.99
MTCL1-201ENST00000306329 WDR43Q15061 677 aaKnown RBP eCLIP27.4■■□□□ 1.98
MTCL1-201ENST00000306329 CHIC2Q9UKJ5 165 aa27.38■■□□□ 1.97
MTCL1-201ENST00000306329 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.36■■□□□ 1.97
MTCL1-201ENST00000306329 MRS2Q9HD23 443 aa27.36■■□□□ 1.97
MTCL1-201ENST00000306329 IRX6P78412 446 aaPredicted RBP27.33■■□□□ 1.97
MTCL1-201ENST00000306329 KDM2AQ9Y2K7 1162 aa27.28■■□□□ 1.96
MTCL1-201ENST00000306329 NPM1P06748 294 aaKnown RBP eCLIP27.21■■□□□ 1.95
MTCL1-201ENST00000306329 MYH16Q9H6N6 1097 aa27.2■■□□□ 1.95
MTCL1-201ENST00000306329 HIRIP3Q9BW71 556 aaPredicted RBP27.17■■□□□ 1.94
MTCL1-201ENST00000306329 MIER1Q8N108 512 aa27.16■■□□□ 1.94
MTCL1-201ENST00000306329 DCAF1Q9Y4B6 1507 aa27.13■■□□□ 1.93
MTCL1-201ENST00000306329 SCAF1Q9H7N4 1312 aaKnown RBP27.12■■□□□ 1.93
MTCL1-201ENST00000306329 TSPY4P0CV99 314 aa27.1■■□□□ 1.93
MTCL1-201ENST00000306329 TSPY10P0CW01 314 aa27.1■■□□□ 1.93
MTCL1-201ENST00000306329 CDK11BP21127 795 aaKnown RBP27.09■■□□□ 1.93
MTCL1-201ENST00000306329 A0A0G2JS52 829 aa27.05■■□□□ 1.92
MTCL1-201ENST00000306329 BECN1Q14457 450 aa27.05■■□□□ 1.92
MTCL1-201ENST00000306329 DDRGK1Q96HY6 314 aa27.03■■□□□ 1.92
MTCL1-201ENST00000306329 EIF4G2P78344 907 aaKnown RBP eCLIP27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms