RNA–Protein interactions for RNA: ENST00000359983.7

ATP2A3-203, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 5 BASIC

Gene ATP2A3, Length 3,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-203ENST00000359983 NISCHQ9Y2I1 1504 aa25.36■■□□□ 1.65
ATP2A3-203ENST00000359983 SHROOM4Q9ULL8 1493 aa22.63■■□□□ 1.21
ATP2A3-203ENST00000359983 SUPT5HO00267 1087 aaKnown RBP22.3■■□□□ 1.16
ATP2A3-203ENST00000359983 DCAF8L2P0C7V8 631 aa22.14■■□□□ 1.13
ATP2A3-203ENST00000359983 ZCCHC6Q5VYS8 1495 aaKnown RBP21.38■■□□□ 1.01
ATP2A3-203ENST00000359983 CHIC1Q5VXU3 224 aa21.33■■□□□ 1.01
ATP2A3-203ENST00000359983 MYO15BQ96JP2 1530 aa21.21■□□□□ 0.99
ATP2A3-203ENST00000359983 PCGF6Q9BYE7 350 aa21.17■□□□□ 0.98
ATP2A3-203ENST00000359983 CCDC180Q9P1Z9 1646 aa21.13■□□□□ 0.97
ATP2A3-203ENST00000359983 LOC105371045A0A1W2PR82 267 aa21.06■□□□□ 0.96
ATP2A3-203ENST00000359983 EHMT2Q96KQ7 1210 aa20.91■□□□□ 0.94
ATP2A3-203ENST00000359983 HRCP23327 699 aa20.9■□□□□ 0.94
ATP2A3-203ENST00000359983 PPARGC1BQ86YN6 1023 aaKnown RBP20.89■□□□□ 0.93
ATP2A3-203ENST00000359983 FAM9AQ8IZU1 332 aaPredicted RBP20.75■□□□□ 0.91
ATP2A3-203ENST00000359983 TRIM41Q8WV44 630 aa20.51■□□□□ 0.87
ATP2A3-203ENST00000359983 SCRIBQ14160 1630 aa20.44■□□□□ 0.86
ATP2A3-203ENST00000359983 DCAF1Q9Y4B6 1507 aa20.39■□□□□ 0.85
ATP2A3-203ENST00000359983 TRIM26Q12899 539 aaPredicted RBP20.37■□□□□ 0.85
ATP2A3-203ENST00000359983 ABCC9O60706 1549 aa20.29■□□□□ 0.84
ATP2A3-203ENST00000359983 RSF1Q96T23 1441 aaPredicted RBP20.29■□□□□ 0.84
ATP2A3-203ENST00000359983 TTBK1Q5TCY1 1321 aaPredicted RBP20.19■□□□□ 0.82
ATP2A3-203ENST00000359983 RB1CC1Q8TDY2 1594 aa20.11■□□□□ 0.81
ATP2A3-203ENST00000359983 CECR2Q9BXF3 1484 aa20.08■□□□□ 0.81
ATP2A3-203ENST00000359983 MROH2BQ7Z745 1585 aa19.9■□□□□ 0.78
ATP2A3-203ENST00000359983 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.89■□□□□ 0.77
ATP2A3-203ENST00000359983 ZEB1P37275 1124 aaPredicted RBP19.82■□□□□ 0.76
ATP2A3-203ENST00000359983 WIZO95785 1651 aa19.79■□□□□ 0.76
ATP2A3-203ENST00000359983 CCER1Q8TC90 406 aaPredicted RBP19.78■□□□□ 0.76
ATP2A3-203ENST00000359983 PABPN1Q86U42 306 aaKnown RBP eCLIP19.74■□□□□ 0.75
ATP2A3-203ENST00000359983 RANGAP1P46060 587 aaPredicted RBP19.67■□□□□ 0.74
ATP2A3-203ENST00000359983 NACADO15069 1562 aa19.66■□□□□ 0.74
ATP2A3-203ENST00000359983 UBTFP17480 764 aaKnown RBP19.66■□□□□ 0.74
ATP2A3-203ENST00000359983 ABCC8Q09428 1581 aa19.57■□□□□ 0.72
ATP2A3-203ENST00000359983 CCDC88BA6NC98 1476 aa19.51■□□□□ 0.71
ATP2A3-203ENST00000359983 SCAF1Q9H7N4 1312 aaKnown RBP19.5■□□□□ 0.71
ATP2A3-203ENST00000359983 SOGA1O94964 1423 aa19.48■□□□□ 0.71
ATP2A3-203ENST00000359983 BAZ1AQ9NRL2 1556 aaPredicted RBP19.42■□□□□ 0.7
ATP2A3-203ENST00000359983 HNRNPUL2Q1KMD3 747 aaKnown RBP19.41■□□□□ 0.7
ATP2A3-203ENST00000359983 CSRNP3Q8WYN3 585 aa19.4■□□□□ 0.7
ATP2A3-203ENST00000359983 RUSC2Q8N2Y8 1516 aa19.39■□□□□ 0.69
ATP2A3-203ENST00000359983 CEP162Q5TB80 1403 aa19.35■□□□□ 0.69
ATP2A3-203ENST00000359983 DIEXFQ68CQ4 756 aaKnown RBP19.35■□□□□ 0.69
ATP2A3-203ENST00000359983 YTHDC1Q96MU7 727 aaKnown RBP19.3■□□□□ 0.68
ATP2A3-203ENST00000359983 NEUROD1Q13562 356 aa19.28■□□□□ 0.68
ATP2A3-203ENST00000359983 TOP2AP11388 1531 aaKnown RBP19.26■□□□□ 0.67
ATP2A3-203ENST00000359983 SMARCA4P51532 1647 aa19.24■□□□□ 0.67
ATP2A3-203ENST00000359983 SMARCA2P51531 1590 aa19.22■□□□□ 0.67
ATP2A3-203ENST00000359983 APLP2Q06481 763 aa19.19■□□□□ 0.66
ATP2A3-203ENST00000359983 ACIN1Q9UKV3 1341 aaKnown RBP19.17■□□□□ 0.66
ATP2A3-203ENST00000359983 EIF4G1Q04637 1599 aaKnown RBP19.17■□□□□ 0.66
ATP2A3-203ENST00000359983 TNIKQ9UKE5 1360 aa19.17■□□□□ 0.66
ATP2A3-203ENST00000359983 GTF3C3Q9Y5Q9 886 aa19.15■□□□□ 0.66
ATP2A3-203ENST00000359983 UNC13AQ9UPW8 1703 aa19.14■□□□□ 0.65
ATP2A3-203ENST00000359983 WRNQ14191 1432 aaPredicted RBP eCLIP19.12■□□□□ 0.65
ATP2A3-203ENST00000359983 CENPBP07199 599 aaPredicted RBP19.07■□□□□ 0.64
ATP2A3-203ENST00000359983 ZNF316A6NFI3 1004 aaPredicted RBP19.05■□□□□ 0.64
ATP2A3-203ENST00000359983 GOLGA3Q08378 1498 aa19.04■□□□□ 0.64
ATP2A3-203ENST00000359983 PELP1Q8IZL8 1130 aaKnown RBP19.01■□□□□ 0.63
ATP2A3-203ENST00000359983 ITGAEP38570 1179 aa19■□□□□ 0.63
ATP2A3-203ENST00000359983 CLIP1P30622 1438 aa19■□□□□ 0.63
ATP2A3-203ENST00000359983 MIER1Q8N108 512 aa18.96■□□□□ 0.63
ATP2A3-203ENST00000359983 EEA1Q15075 1411 aa18.95■□□□□ 0.62
ATP2A3-203ENST00000359983 BICRAQ9NZM4 1560 aa18.92■□□□□ 0.62
ATP2A3-203ENST00000359983 SYNJ1O43426 1573 aa18.91■□□□□ 0.62
ATP2A3-203ENST00000359983 RAPGEF2Q9Y4G8 1499 aa18.91■□□□□ 0.62
ATP2A3-203ENST00000359983 BAZ1BQ9UIG0 1483 aaKnown RBP18.89■□□□□ 0.61
ATP2A3-203ENST00000359983 CEP164Q9UPV0 1460 aa18.88■□□□□ 0.61
ATP2A3-203ENST00000359983 ATAD2BQ9ULI0 1458 aa18.85■□□□□ 0.61
ATP2A3-203ENST00000359983 KANK4Q5T7N3 995 aaPredicted RBP18.82■□□□□ 0.6
ATP2A3-203ENST00000359983 ATP1B4Q9UN42 357 aaPredicted RBP18.8■□□□□ 0.6
ATP2A3-203ENST00000359983 VPS8Q8N3P4 1428 aa18.78■□□□□ 0.6
ATP2A3-203ENST00000359983 P3H3Q8IVL6 736 aa18.71■□□□□ 0.59
ATP2A3-203ENST00000359983 KIF21BO75037 1637 aa18.66■□□□□ 0.58
ATP2A3-203ENST00000359983 MYT1Q01538 1121 aa18.59■□□□□ 0.57
ATP2A3-203ENST00000359983 PEG3Q9GZU2 1588 aa18.57■□□□□ 0.56
ATP2A3-203ENST00000359983 FAM50AQ14320 339 aaKnown RBP18.57■□□□□ 0.56
ATP2A3-203ENST00000359983 DHX57Q6P158 1386 aaKnown RBP18.53■□□□□ 0.56
ATP2A3-203ENST00000359983 ARAP1Q96P48 1450 aa18.53■□□□□ 0.56
ATP2A3-203ENST00000359983 HIRIP3Q9BW71 556 aaPredicted RBP18.51■□□□□ 0.55
ATP2A3-203ENST00000359983 KIF27Q86VH2 1401 aa18.5■□□□□ 0.55
ATP2A3-203ENST00000359983 TOP2BQ02880 1626 aa18.49■□□□□ 0.55
ATP2A3-203ENST00000359983 KCNH8Q96L42 1107 aa18.47■□□□□ 0.55
ATP2A3-203ENST00000359983 CUX1P39880 1505 aa18.46■□□□□ 0.54
ATP2A3-203ENST00000359983 SIN3AQ96ST3 1273 aa18.45■□□□□ 0.54
ATP2A3-203ENST00000359983 PRXQ9BXM0 1461 aa18.45■□□□□ 0.54
ATP2A3-203ENST00000359983 CCNB3Q8WWL7 1395 aa18.42■□□□□ 0.54
ATP2A3-203ENST00000359983 CUX2O14529 1486 aa18.42■□□□□ 0.54
ATP2A3-203ENST00000359983 BCANQ96GW7 911 aa18.38■□□□□ 0.53
ATP2A3-203ENST00000359983 DDX10Q13206 875 aaKnown RBP18.38■□□□□ 0.53
ATP2A3-203ENST00000359983 ARHGAP35Q9NRY4 1499 aa18.36■□□□□ 0.53
ATP2A3-203ENST00000359983 RAB3GAP2Q9H2M9 1393 aa18.34■□□□□ 0.53
ATP2A3-203ENST00000359983 IGF1RP08069 1367 aa18.32■□□□□ 0.52
ATP2A3-203ENST00000359983 CARMIL1Q5VZK9 1371 aa18.32■□□□□ 0.52
ATP2A3-203ENST00000359983 NCAPD3P42695 1498 aa18.32■□□□□ 0.52
ATP2A3-203ENST00000359983 ERICH3Q5RHP9 1530 aa18.29■□□□□ 0.52
ATP2A3-203ENST00000359983 BIVM-ERCC5R4GMW8 1640 aa18.29■□□□□ 0.52
ATP2A3-203ENST00000359983 ARID3CA6NKF2 412 aa18.27■□□□□ 0.52
ATP2A3-203ENST00000359983 CLSPNQ9HAW4 1339 aa18.27■□□□□ 0.52
ATP2A3-203ENST00000359983 SUPT16HQ9Y5B9 1047 aaKnown RBP18.27■□□□□ 0.52
ATP2A3-203ENST00000359983 CFTRP13569 1480 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms