RNA–Protein interactions for RNA: ENST00000471965.1

EMD-205, Transcript of emerin, humanhuman

TSL 2

Gene EMD, Length 800 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMD-205ENST00000471965 NISCHQ9Y2I1 1504 aa53.17■■■■■ 6.1
EMD-205ENST00000471965 CCDC180Q9P1Z9 1646 aa46.96■■■■■ 5.11
EMD-205ENST00000471965 ABCC9O60706 1549 aa44.97■■■■■ 4.79
EMD-205ENST00000471965 ZCCHC6Q5VYS8 1495 aaKnown RBP44.51■■■■■ 4.72
EMD-205ENST00000471965 DCAF1Q9Y4B6 1507 aa44.07■■■■■ 4.65
EMD-205ENST00000471965 MYO15BQ96JP2 1530 aa43.91■■■■■ 4.62
EMD-205ENST00000471965 DCAF8L2P0C7V8 631 aa43.87■■■■■ 4.61
EMD-205ENST00000471965 NACADO15069 1562 aa43.87■■■■■ 4.61
EMD-205ENST00000471965 RB1CC1Q8TDY2 1594 aa43.7■■■■■ 4.59
EMD-205ENST00000471965 SCRIBQ14160 1630 aa42.87■■■■■ 4.45
EMD-205ENST00000471965 UNC13AQ9UPW8 1703 aa42.85■■■■■ 4.45
EMD-205ENST00000471965 SHROOM4Q9ULL8 1493 aa42.46■■■■■ 4.39
EMD-205ENST00000471965 BICRAQ9NZM4 1560 aa42.39■■■■■ 4.38
EMD-205ENST00000471965 PABPN1Q86U42 306 aaKnown RBP eCLIP42.1■■■■■ 4.331e-18■■■■■ 37.4
EMD-205ENST00000471965 CECR2Q9BXF3 1484 aa41.29■■■■■ 4.2
EMD-205ENST00000471965 EIF4G1Q04637 1599 aaKnown RBP41.17■■■■■ 4.18
EMD-205ENST00000471965 BAZ1AQ9NRL2 1556 aaPredicted RBP41.16■■■■■ 4.18
EMD-205ENST00000471965 SMARCA4P51532 1647 aa41.11■■■■■ 4.17
EMD-205ENST00000471965 MROH2BQ7Z745 1585 aa40.99■■■■■ 4.15
EMD-205ENST00000471965 RSF1Q96T23 1441 aaPredicted RBP40.82■■■■■ 4.12
EMD-205ENST00000471965 CC2D2AQ9P2K1 1620 aa40.78■■■■■ 4.12
EMD-205ENST00000471965 PEG3Q9GZU2 1588 aa40.7■■■■■ 4.11
EMD-205ENST00000471965 WIZO95785 1651 aa40.63■■■■■ 4.1
EMD-205ENST00000471965 SMARCA2P51531 1590 aa40.61■■■■■ 4.09
EMD-205ENST00000471965 ATAD2BQ9ULI0 1458 aa40.6■■■■■ 4.09
EMD-205ENST00000471965 NCAPD3P42695 1498 aa40.43■■■■■ 4.06
EMD-205ENST00000471965 DNAJC5BQ9UF47 199 aa40.41■■■■■ 4.06
EMD-205ENST00000471965 HMGXB3Q12766 1538 aa40.37■■■■■ 4.05
EMD-205ENST00000471965 SUPT5HO00267 1087 aaKnown RBP40.35■■■■■ 4.05
EMD-205ENST00000471965 BAZ1BQ9UIG0 1483 aaKnown RBP40.32■■■■■ 4.04
EMD-205ENST00000471965 TOP2AP11388 1531 aaKnown RBP40.25■■■■■ 4.03
EMD-205ENST00000471965 CCDC88BA6NC98 1476 aa39.72■■■■□ 3.95
EMD-205ENST00000471965 CFTRP13569 1480 aa39.27■■■■□ 3.88
EMD-205ENST00000471965 CADPSQ9ULU8 1353 aa39.27■■■■□ 3.88
EMD-205ENST00000471965 LAMC3Q9Y6N6 1575 aa39.27■■■■□ 3.88
EMD-205ENST00000471965 PRDM2Q13029 1718 aa39.21■■■■□ 3.87
EMD-205ENST00000471965 NESP48681 1621 aa39.2■■■■□ 3.87
EMD-205ENST00000471965 PDS5BQ9NTI5 1447 aa38.89■■■■□ 3.82
EMD-205ENST00000471965 KIF21AQ7Z4S6 1674 aa38.86■■■■□ 3.81
EMD-205ENST00000471965 FANCD2Q9BXW9 1451 aa38.86■■■■□ 3.81
EMD-205ENST00000471965 CEP164Q9UPV0 1460 aa38.73■■■■□ 3.79
EMD-205ENST00000471965 ERCC6Q03468 1493 aa38.66■■■■□ 3.78
EMD-205ENST00000471965 ABCC8Q09428 1581 aa38.57■■■■□ 3.77
EMD-205ENST00000471965 THOC2Q8NI27 1593 aaKnown RBP38.49■■■■□ 3.75
EMD-205ENST00000471965 MRC2Q9UBG0 1479 aa38.49■■■■□ 3.75
EMD-205ENST00000471965 WRNQ14191 1432 aaPredicted RBP eCLIP38.46■■■■□ 3.75
EMD-205ENST00000471965 URB2Q14146 1524 aaKnown RBP38.43■■■■□ 3.74
EMD-205ENST00000471965 DNMBPQ6XZF7 1577 aa38.42■■■■□ 3.74
EMD-205ENST00000471965 CUX1P39880 1505 aa38.42■■■■□ 3.74
EMD-205ENST00000471965 SYNJ1O43426 1573 aa38.39■■■■□ 3.74
EMD-205ENST00000471965 WDR62O43379 1518 aa38.38■■■■□ 3.73
EMD-205ENST00000471965 BIVM-ERCC5R4GMW8 1640 aa38.37■■■■□ 3.73
EMD-205ENST00000471965 TOPBP1Q92547 1522 aa38.36■■■■□ 3.73
EMD-205ENST00000471965 TOP2BQ02880 1626 aa38.34■■■■□ 3.73
EMD-205ENST00000471965 CHIC1Q5VXU3 224 aa38.22■■■■□ 3.71
EMD-205ENST00000471965 FGD5Q6ZNL6 1462 aa38.13■■■■□ 3.69
EMD-205ENST00000471965 POLA1P09884 1462 aaPredicted RBP38.09■■■■□ 3.69
EMD-205ENST00000471965 TRIM41Q8WV44 630 aa38.07■■■■□ 3.68
EMD-205ENST00000471965 CUX2O14529 1486 aa37.98■■■■□ 3.67
EMD-205ENST00000471965 TARBP1Q13395 1621 aaKnown RBP37.92■■■■□ 3.66
EMD-205ENST00000471965 RAD54L2Q9Y4B4 1467 aa37.89■■■■□ 3.66
EMD-205ENST00000471965 SOGA1O94964 1423 aa37.88■■■■□ 3.66
EMD-205ENST00000471965 WDR97A6NE52 1622 aa37.88■■■■□ 3.65
EMD-205ENST00000471965 IFT140Q96RY7 1462 aa37.87■■■■□ 3.65
EMD-205ENST00000471965 ABCA10Q8WWZ4 1543 aa37.81■■■■□ 3.64
EMD-205ENST00000471965 ABCA5Q8WWZ7 1642 aa37.64■■■■□ 3.62
EMD-205ENST00000471965 ZNF608Q9ULD9 1512 aaPredicted RBP37.63■■■■□ 3.61
EMD-205ENST00000471965 EIF4G3O43432 1585 aaKnown RBP37.59■■■■□ 3.61
EMD-205ENST00000471965 KIF27Q86VH2 1401 aa37.57■■■■□ 3.6
EMD-205ENST00000471965 TDRD9Q8NDG6 1382 aaKnown RBP37.55■■■■□ 3.6
EMD-205ENST00000471965 RUSC2Q8N2Y8 1516 aa37.52■■■■□ 3.6
EMD-205ENST00000471965 GAPVD1Q14C86 1478 aa37.51■■■■□ 3.59
EMD-205ENST00000471965 AQRO60306 1485 aaKnown RBP eCLIP37.5■■■■□ 3.591e-37■■■■□ 26.6
EMD-205ENST00000471965 PBRM1Q86U86 1689 aa37.49■■■■□ 3.59
EMD-205ENST00000471965 EEA1Q15075 1411 aa37.46■■■■□ 3.59
EMD-205ENST00000471965 ERICH3Q5RHP9 1530 aa37.38■■■■□ 3.57
EMD-205ENST00000471965 GRIN2BQ13224 1484 aa37.37■■■■□ 3.57
EMD-205ENST00000471965 IGF1RP08069 1367 aa37.29■■■■□ 3.56
EMD-205ENST00000471965 CUL7Q14999 1698 aa37.25■■■■□ 3.55
EMD-205ENST00000471965 FAM9AQ8IZU1 332 aaPredicted RBP37.25■■■■□ 3.55
EMD-205ENST00000471965 SNAPC4Q5SXM2 1469 aa37.21■■■■□ 3.55
EMD-205ENST00000471965 MAGI1Q96QZ7 1491 aaPredicted RBP37.2■■■■□ 3.55
EMD-205ENST00000471965 CSRNP3Q8WYN3 585 aa37.2■■■■□ 3.55
EMD-205ENST00000471965 ADAMTS12P58397 1594 aa37.2■■■■□ 3.55
EMD-205ENST00000471965 PRXQ9BXM0 1461 aa37.11■■■■□ 3.53
EMD-205ENST00000471965 FHAD1B1AJZ9 1412 aa37.1■■■■□ 3.53
EMD-205ENST00000471965 CARMIL1Q5VZK9 1371 aa37.09■■■■□ 3.53
EMD-205ENST00000471965 KIF21BO75037 1637 aa37.08■■■■□ 3.53
EMD-205ENST00000471965 SYNJ2O15056 1496 aa37.03■■■■□ 3.52
EMD-205ENST00000471965 RAPGEF2Q9Y4G8 1499 aa37■■■■□ 3.51
EMD-205ENST00000471965 CHD1O14646 1710 aa36.98■■■■□ 3.51
EMD-205ENST00000471965 GRIN2AQ12879 1464 aa36.92■■■■□ 3.5
EMD-205ENST00000471965 GOLGA3Q08378 1498 aa36.88■■■■□ 3.49
EMD-205ENST00000471965 CHMP7Q8WUX9 453 aaPredicted RBP36.84■■■■□ 3.49
EMD-205ENST00000471965 FBLN2P98095 1184 aa36.78■■■■□ 3.48
EMD-205ENST00000471965 CEP170Q5SW79 1584 aa36.73■■■■□ 3.47
EMD-205ENST00000471965 CTTNBP2Q8WZ74 1663 aa36.73■■■■□ 3.47
EMD-205ENST00000471965 NUP160Q12769 1436 aa36.72■■■■□ 3.47
EMD-205ENST00000471965 EHMT2Q96KQ7 1210 aa36.68■■■■□ 3.46
EMD-205ENST00000471965 LOC105371045A0A1W2PR82 267 aa36.62■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms