RNA–Protein interactions for RNA: ENST00000314891.10

LPCAT4-201, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT4, Length 2,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-201ENST00000314891 NISCHQ9Y2I1 1504 aa45.41■■■■■ 4.86
LPCAT4-201ENST00000314891 CCDC180Q9P1Z9 1646 aa38.97■■■■□ 3.83
LPCAT4-201ENST00000314891 ZCCHC6Q5VYS8 1495 aaKnown RBP38.33■■■■□ 3.73
LPCAT4-201ENST00000314891 SHROOM4Q9ULL8 1493 aa38.16■■■■□ 3.7
LPCAT4-201ENST00000314891 DCAF8L2P0C7V8 631 aa37.54■■■■□ 3.6
LPCAT4-201ENST00000314891 DCAF1Q9Y4B6 1507 aa37.33■■■■□ 3.57
LPCAT4-201ENST00000314891 SUPT5HO00267 1087 aaKnown RBP37.16■■■■□ 3.54
LPCAT4-201ENST00000314891 MYO15BQ96JP2 1530 aa36.44■■■■□ 3.42
LPCAT4-201ENST00000314891 ABCC9O60706 1549 aa36.31■■■■□ 3.4
LPCAT4-201ENST00000314891 SCRIBQ14160 1630 aa36.31■■■■□ 3.4
LPCAT4-201ENST00000314891 NACADO15069 1562 aa36.06■■■■□ 3.36
LPCAT4-201ENST00000314891 CHIC1Q5VXU3 224 aa35.97■■■■□ 3.35
LPCAT4-201ENST00000314891 RSF1Q96T23 1441 aaPredicted RBP35.69■■■■□ 3.3
LPCAT4-201ENST00000314891 RB1CC1Q8TDY2 1594 aa35.57■■■■□ 3.28
LPCAT4-201ENST00000314891 CECR2Q9BXF3 1484 aa35.4■■■■□ 3.26
LPCAT4-201ENST00000314891 MROH2BQ7Z745 1585 aa35.26■■■■□ 3.24
LPCAT4-201ENST00000314891 UNC13AQ9UPW8 1703 aa35.16■■■■□ 3.22
LPCAT4-201ENST00000314891 WIZO95785 1651 aa35.09■■■■□ 3.21
LPCAT4-201ENST00000314891 BAZ1AQ9NRL2 1556 aaPredicted RBP34.93■■■■□ 3.18
LPCAT4-201ENST00000314891 LOC105371045A0A1W2PR82 267 aa34.83■■■■□ 3.17
LPCAT4-201ENST00000314891 SMARCA4P51532 1647 aa34.73■■■■□ 3.15
LPCAT4-201ENST00000314891 TRIM41Q8WV44 630 aa34.69■■■■□ 3.14
LPCAT4-201ENST00000314891 BICRAQ9NZM4 1560 aa34.65■■■■□ 3.14
LPCAT4-201ENST00000314891 PABPN1Q86U42 306 aaKnown RBP eCLIP34.55■■■■□ 3.121e-6■■□□□ 13.4
LPCAT4-201ENST00000314891 TOP2AP11388 1531 aaKnown RBP34.53■■■■□ 3.12
LPCAT4-201ENST00000314891 EIF4G1Q04637 1599 aaKnown RBP34.46■■■■□ 3.11
LPCAT4-201ENST00000314891 FAM9AQ8IZU1 332 aaPredicted RBP34.33■■■■□ 3.09
LPCAT4-201ENST00000314891 SMARCA2P51531 1590 aa34.33■■■■□ 3.09
LPCAT4-201ENST00000314891 CCDC88BA6NC98 1476 aa34.31■■■■□ 3.08
LPCAT4-201ENST00000314891 PCGF6Q9BYE7 350 aa34.27■■■■□ 3.08
LPCAT4-201ENST00000314891 PEG3Q9GZU2 1588 aa34.12■■■■□ 3.05
LPCAT4-201ENST00000314891 ABCC8Q09428 1581 aa34.08■■■■□ 3.05
LPCAT4-201ENST00000314891 EHMT2Q96KQ7 1210 aa34■■■■□ 3.03
LPCAT4-201ENST00000314891 HRCP23327 699 aa33.97■■■■□ 3.03
LPCAT4-201ENST00000314891 ATAD2BQ9ULI0 1458 aa33.89■■■■□ 3.02
LPCAT4-201ENST00000314891 TRIM26Q12899 539 aaPredicted RBP33.79■■■■□ 3
LPCAT4-201ENST00000314891 BAZ1BQ9UIG0 1483 aaKnown RBP33.76■■■■□ 3
LPCAT4-201ENST00000314891 SOGA1O94964 1423 aa33.61■■■□□ 2.97
LPCAT4-201ENST00000314891 WRNQ14191 1432 aaPredicted RBP eCLIP33.53■■■□□ 2.96
LPCAT4-201ENST00000314891 RUSC2Q8N2Y8 1516 aa33.49■■■□□ 2.95
LPCAT4-201ENST00000314891 SYNJ1O43426 1573 aa33.46■■■□□ 2.95
LPCAT4-201ENST00000314891 EEA1Q15075 1411 aa33.39■■■□□ 2.94
LPCAT4-201ENST00000314891 HMGXB3Q12766 1538 aa33.34■■■□□ 2.93
LPCAT4-201ENST00000314891 NCAPD3P42695 1498 aa33.33■■■□□ 2.93
LPCAT4-201ENST00000314891 CSRNP3Q8WYN3 585 aa33.32■■■□□ 2.93
LPCAT4-201ENST00000314891 PPARGC1BQ86YN6 1023 aaKnown RBP33.32■■■□□ 2.92
LPCAT4-201ENST00000314891 CEP162Q5TB80 1403 aa33.22■■■□□ 2.91
LPCAT4-201ENST00000314891 TNIKQ9UKE5 1360 aa33.21■■■□□ 2.91
LPCAT4-201ENST00000314891 GOLGA3Q08378 1498 aa33.13■■■□□ 2.89
LPCAT4-201ENST00000314891 TOP2BQ02880 1626 aa33.12■■■□□ 2.89
LPCAT4-201ENST00000314891 UBTFP17480 764 aaKnown RBP33.1■■■□□ 2.89
LPCAT4-201ENST00000314891 BIVM-ERCC5R4GMW8 1640 aa33.04■■■□□ 2.88
LPCAT4-201ENST00000314891 KIF21BO75037 1637 aa33.04■■■□□ 2.88
LPCAT4-201ENST00000314891 CEP164Q9UPV0 1460 aa33■■■□□ 2.87
LPCAT4-201ENST00000314891 CFTRP13569 1480 aa32.93■■■□□ 2.86
LPCAT4-201ENST00000314891 CUX1P39880 1505 aa32.87■■■□□ 2.85
LPCAT4-201ENST00000314891 RAPGEF2Q9Y4G8 1499 aa32.83■■■□□ 2.85
LPCAT4-201ENST00000314891 PRDM2Q13029 1718 aa32.82■■■□□ 2.84
LPCAT4-201ENST00000314891 CC2D2AQ9P2K1 1620 aa32.8■■■□□ 2.84
LPCAT4-201ENST00000314891 ZEB1P37275 1124 aaPredicted RBP32.79■■■□□ 2.84
LPCAT4-201ENST00000314891 TTBK1Q5TCY1 1321 aaPredicted RBP32.79■■■□□ 2.84
LPCAT4-201ENST00000314891 CLIP1P30622 1438 aa32.7■■■□□ 2.83
LPCAT4-201ENST00000314891 CADPSQ9ULU8 1353 aa32.62■■■□□ 2.81
LPCAT4-201ENST00000314891 PRXQ9BXM0 1461 aa32.6■■■□□ 2.81
LPCAT4-201ENST00000314891 ERICH3Q5RHP9 1530 aa32.58■■■□□ 2.81
LPCAT4-201ENST00000314891 KIF27Q86VH2 1401 aa32.53■■■□□ 2.8
LPCAT4-201ENST00000314891 VPS8Q8N3P4 1428 aa32.52■■■□□ 2.8
LPCAT4-201ENST00000314891 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.52■■■□□ 2.8
LPCAT4-201ENST00000314891 RANGAP1P46060 587 aaPredicted RBP32.52■■■□□ 2.8
LPCAT4-201ENST00000314891 CCER1Q8TC90 406 aaPredicted RBP32.38■■■□□ 2.77
LPCAT4-201ENST00000314891 FGD5Q6ZNL6 1462 aa32.34■■■□□ 2.77
LPCAT4-201ENST00000314891 CUX2O14529 1486 aa32.33■■■□□ 2.77
LPCAT4-201ENST00000314891 FANCD2Q9BXW9 1451 aa32.32■■■□□ 2.76
LPCAT4-201ENST00000314891 ARAP1Q96P48 1450 aa32.29■■■□□ 2.76
LPCAT4-201ENST00000314891 NESP48681 1621 aa32.25■■■□□ 2.75
LPCAT4-201ENST00000314891 APLP2Q06481 763 aa32.23■■■□□ 2.75
LPCAT4-201ENST00000314891 IGF1RP08069 1367 aa32.22■■■□□ 2.75
LPCAT4-201ENST00000314891 DNMBPQ6XZF7 1577 aa32.14■■■□□ 2.74
LPCAT4-201ENST00000314891 ARHGAP35Q9NRY4 1499 aa32.09■■■□□ 2.73
LPCAT4-201ENST00000314891 TOPBP1Q92547 1522 aa32.08■■■□□ 2.73
LPCAT4-201ENST00000314891 CARMIL1Q5VZK9 1371 aa32.06■■■□□ 2.72
LPCAT4-201ENST00000314891 HNRNPUL2Q1KMD3 747 aaKnown RBP32.05■■■□□ 2.72
LPCAT4-201ENST00000314891 RAD54L2Q9Y4B4 1467 aa32.04■■■□□ 2.72
LPCAT4-201ENST00000314891 POLA1P09884 1462 aaPredicted RBP32.03■■■□□ 2.72
LPCAT4-201ENST00000314891 LAMC3Q9Y6N6 1575 aa32.03■■■□□ 2.72
LPCAT4-201ENST00000314891 DNAJC5BQ9UF47 199 aa31.97■■■□□ 2.71
LPCAT4-201ENST00000314891 ABCA10Q8WWZ4 1543 aa31.97■■■□□ 2.71
LPCAT4-201ENST00000314891 KANK4Q5T7N3 995 aaPredicted RBP31.97■■■□□ 2.71
LPCAT4-201ENST00000314891 URB2Q14146 1524 aaKnown RBP31.9■■■□□ 2.7
LPCAT4-201ENST00000314891 WDR97A6NE52 1622 aa31.83■■■□□ 2.69
LPCAT4-201ENST00000314891 KIF21AQ7Z4S6 1674 aa31.79■■■□□ 2.68
LPCAT4-201ENST00000314891 CUL7Q14999 1698 aa31.77■■■□□ 2.68
LPCAT4-201ENST00000314891 PDS5BQ9NTI5 1447 aa31.76■■■□□ 2.67
LPCAT4-201ENST00000314891 RRBP1Q9P2E9 1410 aaKnown RBP31.7■■■□□ 2.67
LPCAT4-201ENST00000314891 TIAM1Q13009 1591 aa31.69■■■□□ 2.66
LPCAT4-201ENST00000314891 CTTNBP2Q8WZ74 1663 aa31.68■■■□□ 2.66
LPCAT4-201ENST00000314891 ABCA5Q8WWZ7 1642 aa31.67■■■□□ 2.66
LPCAT4-201ENST00000314891 TDRD9Q8NDG6 1382 aaKnown RBP31.64■■■□□ 2.66
LPCAT4-201ENST00000314891 P3H3Q8IVL6 736 aa31.63■■■□□ 2.65
LPCAT4-201ENST00000314891 MAP3K1Q13233 1512 aa31.62■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms