RNA–Protein interactions for RNA: ENST00000452293.5

RETREG2-207, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 4

Gene RETREG2, Length 609 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-207ENST00000452293 NISCHQ9Y2I1 1504 aa63.94■■■■■ 7.83
RETREG2-207ENST00000452293 CCDC180Q9P1Z9 1646 aa56.99■■■■■ 6.71
RETREG2-207ENST00000452293 ABCC9O60706 1549 aa56.19■■■■■ 6.59
RETREG2-207ENST00000452293 RB1CC1Q8TDY2 1594 aa53.78■■■■■ 6.2
RETREG2-207ENST00000452293 DCAF8L2P0C7V8 631 aa53.69■■■■■ 6.19
RETREG2-207ENST00000452293 NACADO15069 1562 aa53.59■■■■■ 6.17
RETREG2-207ENST00000452293 ZCCHC6Q5VYS8 1495 aaKnown RBP53.2■■■■■ 6.11
RETREG2-207ENST00000452293 MYO15BQ96JP2 1530 aa53.03■■■■■ 6.08
RETREG2-207ENST00000452293 UNC13AQ9UPW8 1703 aa52.83■■■■■ 6.05
RETREG2-207ENST00000452293 DCAF1Q9Y4B6 1507 aa52.75■■■■■ 6.03
RETREG2-207ENST00000452293 PABPN1Q86U42 306 aaKnown RBP eCLIP52.46■■■■■ 5.99
RETREG2-207ENST00000452293 BICRAQ9NZM4 1560 aa52.26■■■■■ 5.96
RETREG2-207ENST00000452293 SCRIBQ14160 1630 aa52.15■■■■■ 5.94
RETREG2-207ENST00000452293 DNAJC5BQ9UF47 199 aa51.85■■■■■ 5.89
RETREG2-207ENST00000452293 SHROOM4Q9ULL8 1493 aa51.39■■■■■ 5.82
RETREG2-207ENST00000452293 EIF4G1Q04637 1599 aaKnown RBP50.86■■■■■ 5.73
RETREG2-207ENST00000452293 CC2D2AQ9P2K1 1620 aa50.8■■■■■ 5.72
RETREG2-207ENST00000452293 CECR2Q9BXF3 1484 aa50.43■■■■■ 5.66
RETREG2-207ENST00000452293 SMARCA4P51532 1647 aa49.75■■■■■ 5.56
RETREG2-207ENST00000452293 BAZ1AQ9NRL2 1556 aaPredicted RBP49.55■■■■■ 5.52
RETREG2-207ENST00000452293 ATAD2BQ9ULI0 1458 aa49.49■■■■■ 5.51
RETREG2-207ENST00000452293 NCAPD3P42695 1498 aa49.42■■■■■ 5.5
RETREG2-207ENST00000452293 SMARCA2P51531 1590 aa49.37■■■■■ 5.49
RETREG2-207ENST00000452293 MROH2BQ7Z745 1585 aa49.37■■■■■ 5.49
RETREG2-207ENST00000452293 HMGXB3Q12766 1538 aa49.19■■■■■ 5.47
RETREG2-207ENST00000452293 PEG3Q9GZU2 1588 aa49.14■■■■■ 5.46
RETREG2-207ENST00000452293 BAZ1BQ9UIG0 1483 aaKnown RBP49.08■■■■■ 5.45
RETREG2-207ENST00000452293 WIZO95785 1651 aa48.91■■■■■ 5.42
RETREG2-207ENST00000452293 RSF1Q96T23 1441 aaPredicted RBP48.61■■■■■ 5.37
RETREG2-207ENST00000452293 NESP48681 1621 aa48.57■■■■■ 5.37
RETREG2-207ENST00000452293 ERCC6Q03468 1493 aa48.38■■■■■ 5.34
RETREG2-207ENST00000452293 LAMC3Q9Y6N6 1575 aa48.23■■■■■ 5.31
RETREG2-207ENST00000452293 TOP2AP11388 1531 aaKnown RBP48.22■■■■■ 5.31
RETREG2-207ENST00000452293 KIF21AQ7Z4S6 1674 aa48.04■■■■■ 5.28
RETREG2-207ENST00000452293 CADPSQ9ULU8 1353 aa48■■■■■ 5.27
RETREG2-207ENST00000452293 CUX2O14529 1486 aa47.86■■■■■ 5.25
RETREG2-207ENST00000452293 THOC2Q8NI27 1593 aaKnown RBP47.85■■■■■ 5.25
RETREG2-207ENST00000452293 PDS5BQ9NTI5 1447 aa47.85■■■■■ 5.25
RETREG2-207ENST00000452293 CCDC88BA6NC98 1476 aa47.68■■■■■ 5.22
RETREG2-207ENST00000452293 CFTRP13569 1480 aa47.65■■■■■ 5.22
RETREG2-207ENST00000452293 FANCD2Q9BXW9 1451 aa47.53■■■■■ 5.2
RETREG2-207ENST00000452293 CEP164Q9UPV0 1460 aa47.48■■■■■ 5.19
RETREG2-207ENST00000452293 PRDM2Q13029 1718 aa47.47■■■■■ 5.19
RETREG2-207ENST00000452293 MRC2Q9UBG0 1479 aa47.46■■■■■ 5.19
RETREG2-207ENST00000452293 WDR62O43379 1518 aa47.32■■■■■ 5.17
RETREG2-207ENST00000452293 SUPT5HO00267 1087 aaKnown RBP47.29■■■■■ 5.16
RETREG2-207ENST00000452293 URB2Q14146 1524 aaKnown RBP47.12■■■■■ 5.13
RETREG2-207ENST00000452293 DNAJC5Q9H3Z4 198 aa46.77■■■■■ 5.08
RETREG2-207ENST00000452293 TOPBP1Q92547 1522 aa46.75■■■■■ 5.07
RETREG2-207ENST00000452293 DNMBPQ6XZF7 1577 aa46.65■■■■■ 5.06
RETREG2-207ENST00000452293 ABCC8Q09428 1581 aa46.56■■■■■ 5.04
RETREG2-207ENST00000452293 IFT140Q96RY7 1462 aa46.44■■■■■ 5.03
RETREG2-207ENST00000452293 ZNF608Q9ULD9 1512 aaPredicted RBP46.42■■■■■ 5.02
RETREG2-207ENST00000452293 CUX1P39880 1505 aa46.33■■■■■ 5.01
RETREG2-207ENST00000452293 POLA1P09884 1462 aaPredicted RBP46.32■■■■■ 5.01
RETREG2-207ENST00000452293 TARBP1Q13395 1621 aaKnown RBP46.29■■■■■ 5
RETREG2-207ENST00000452293 EIF4G3O43432 1585 aaKnown RBP46.22■■■■■ 4.99
RETREG2-207ENST00000452293 RAD54L2Q9Y4B4 1467 aa46.21■■■■■ 4.99
RETREG2-207ENST00000452293 FGD5Q6ZNL6 1462 aa46.2■■■■■ 4.99
RETREG2-207ENST00000452293 SOGA1O94964 1423 aa46.1■■■■■ 4.97
RETREG2-207ENST00000452293 AQRO60306 1485 aaKnown RBP eCLIP46.09■■■■■ 4.976e-9■■■■■ 39
RETREG2-207ENST00000452293 TDRD9Q8NDG6 1382 aaKnown RBP45.94■■■■■ 4.94
RETREG2-207ENST00000452293 WDR97A6NE52 1622 aa45.9■■■■■ 4.94
RETREG2-207ENST00000452293 SYNJ1O43426 1573 aa45.87■■■■■ 4.93
RETREG2-207ENST00000452293 BIVM-ERCC5R4GMW8 1640 aa45.84■■■■■ 4.93
RETREG2-207ENST00000452293 OSCARQ8IYS5 282 aa45.83■■■■■ 4.93
RETREG2-207ENST00000452293 WRNQ14191 1432 aaPredicted RBP eCLIP45.83■■■■■ 4.93
RETREG2-207ENST00000452293 TOP2BQ02880 1626 aa45.8■■■■■ 4.92
RETREG2-207ENST00000452293 CHD1O14646 1710 aa45.8■■■■■ 4.92
RETREG2-207ENST00000452293 ABCA10Q8WWZ4 1543 aa45.66■■■■■ 4.9
RETREG2-207ENST00000452293 PBRM1Q86U86 1689 aa45.66■■■■■ 4.9
RETREG2-207ENST00000452293 SNAPC4Q5SXM2 1469 aa45.65■■■■■ 4.9
RETREG2-207ENST00000452293 FBLN2P98095 1184 aa45.61■■■■■ 4.89
RETREG2-207ENST00000452293 ABCA5Q8WWZ7 1642 aa45.59■■■■■ 4.89
RETREG2-207ENST00000452293 GRIN2BQ13224 1484 aa45.57■■■■■ 4.89
RETREG2-207ENST00000452293 GAPVD1Q14C86 1478 aa45.56■■■■■ 4.88
RETREG2-207ENST00000452293 MAGI1Q96QZ7 1491 aaPredicted RBP45.45■■■■■ 4.87
RETREG2-207ENST00000452293 CHMP7Q8WUX9 453 aaPredicted RBP45.33■■■■■ 4.85
RETREG2-207ENST00000452293 RIMBP3CA6NJZ7 1639 aa45.33■■■■■ 4.85
RETREG2-207ENST00000452293 RIMBP3BA6NNM3 1639 aa45.33■■■■■ 4.85
RETREG2-207ENST00000452293 RIMBP3Q9UFD9 1639 aa45.33■■■■■ 4.85
RETREG2-207ENST00000452293 SYNJ2O15056 1496 aa45.3■■■■■ 4.84
RETREG2-207ENST00000452293 TRIM41Q8WV44 630 aa45.3■■■■■ 4.84
RETREG2-207ENST00000452293 ARHGEF11O15085 1522 aa45.21■■■■■ 4.83
RETREG2-207ENST00000452293 ADAMTS12P58397 1594 aa45.19■■■■■ 4.82
RETREG2-207ENST00000452293 CLASP1Q7Z460 1538 aa45.13■■■■■ 4.82
RETREG2-207ENST00000452293 ERICH3Q5RHP9 1530 aa45.08■■■■■ 4.81
RETREG2-207ENST00000452293 GRIN2AQ12879 1464 aa45.02■■■■■ 4.8
RETREG2-207ENST00000452293 FHAD1B1AJZ9 1412 aa44.98■■■■■ 4.79
RETREG2-207ENST00000452293 CEP170Q5SW79 1584 aa44.9■■■■■ 4.78
RETREG2-207ENST00000452293 KIF27Q86VH2 1401 aa44.85■■■■■ 4.77
RETREG2-207ENST00000452293 ARAP1Q96P48 1450 aa44.85■■■■■ 4.77
RETREG2-207ENST00000452293 CYB5RLQ6IPT4 315 aa44.81■■■■■ 4.76
RETREG2-207ENST00000452293 NUP160Q12769 1436 aa44.79■■■■■ 4.76
RETREG2-207ENST00000452293 IGF1RP08069 1367 aa44.73■■■■■ 4.75
RETREG2-207ENST00000452293 CUL7Q14999 1698 aa44.67■■■■■ 4.74
RETREG2-207ENST00000452293 ERCC6L2Q5T890 1561 aa44.63■■■■■ 4.73
RETREG2-207ENST00000452293 RUSC2Q8N2Y8 1516 aa44.57■■■■■ 4.73
RETREG2-207ENST00000452293 SHROOM2Q13796 1616 aa44.56■■■■■ 4.72
RETREG2-207ENST00000452293 CARMIL1Q5VZK9 1371 aa44.47■■■■■ 4.71
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms