RNA–Protein interactions for RNA: ENST00000479633.2

ARHGAP19-SLIT1-202, Transcript of ARHGAP19-SLIT1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene ARHGAP19-SLIT1, Length 1,876 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP19-SLIT1-202ENST00000479633 NISCHQ9Y2I1 1504 aa23.97■■□□□ 1.43
ARHGAP19-SLIT1-202ENST00000479633 CCDC180Q9P1Z9 1646 aa20.74■□□□□ 0.91
ARHGAP19-SLIT1-202ENST00000479633 ZCCHC6Q5VYS8 1495 aaKnown RBP20.21■□□□□ 0.83
ARHGAP19-SLIT1-202ENST00000479633 DCAF1Q9Y4B6 1507 aa19.83■□□□□ 0.77
ARHGAP19-SLIT1-202ENST00000479633 SHROOM4Q9ULL8 1493 aa19.73■□□□□ 0.75
ARHGAP19-SLIT1-202ENST00000479633 DCAF8L2P0C7V8 631 aa19.63■□□□□ 0.73
ARHGAP19-SLIT1-202ENST00000479633 MYO15BQ96JP2 1530 aa19.49■□□□□ 0.71
ARHGAP19-SLIT1-202ENST00000479633 ABCC9O60706 1549 aa19.37■□□□□ 0.69
ARHGAP19-SLIT1-202ENST00000479633 NACADO15069 1562 aa19.26■□□□□ 0.67
ARHGAP19-SLIT1-202ENST00000479633 SCRIBQ14160 1630 aa19.12■□□□□ 0.65
ARHGAP19-SLIT1-202ENST00000479633 SUPT5HO00267 1087 aaKnown RBP19.11■□□□□ 0.65
ARHGAP19-SLIT1-202ENST00000479633 RB1CC1Q8TDY2 1594 aa19.01■□□□□ 0.63
ARHGAP19-SLIT1-202ENST00000479633 RSF1Q96T23 1441 aaPredicted RBP18.72■□□□□ 0.59
ARHGAP19-SLIT1-202ENST00000479633 UNC13AQ9UPW8 1703 aa18.63■□□□□ 0.57
ARHGAP19-SLIT1-202ENST00000479633 CECR2Q9BXF3 1484 aa18.62■□□□□ 0.57
ARHGAP19-SLIT1-202ENST00000479633 MROH2BQ7Z745 1585 aa18.53■□□□□ 0.56
ARHGAP19-SLIT1-202ENST00000479633 CHIC1Q5VXU3 224 aa18.48■□□□□ 0.55
ARHGAP19-SLIT1-202ENST00000479633 BAZ1AQ9NRL2 1556 aaPredicted RBP18.47■□□□□ 0.55
ARHGAP19-SLIT1-202ENST00000479633 BICRAQ9NZM4 1560 aa18.47■□□□□ 0.55
ARHGAP19-SLIT1-202ENST00000479633 WIZO95785 1651 aa18.38■□□□□ 0.53
ARHGAP19-SLIT1-202ENST00000479633 SMARCA4P51532 1647 aa18.36■□□□□ 0.53
ARHGAP19-SLIT1-202ENST00000479633 PABPN1Q86U42 306 aaKnown RBP eCLIP18.32■□□□□ 0.52
ARHGAP19-SLIT1-202ENST00000479633 TOP2AP11388 1531 aaKnown RBP18.21■□□□□ 0.51
ARHGAP19-SLIT1-202ENST00000479633 PEG3Q9GZU2 1588 aa18.14■□□□□ 0.5
ARHGAP19-SLIT1-202ENST00000479633 SMARCA2P51531 1590 aa18.06■□□□□ 0.48
ARHGAP19-SLIT1-202ENST00000479633 EIF4G1Q04637 1599 aaKnown RBP18.06■□□□□ 0.48
ARHGAP19-SLIT1-202ENST00000479633 CCDC88BA6NC98 1476 aa18.03■□□□□ 0.48
ARHGAP19-SLIT1-202ENST00000479633 ATAD2BQ9ULI0 1458 aa18■□□□□ 0.47
ARHGAP19-SLIT1-202ENST00000479633 TRIM41Q8WV44 630 aa17.95■□□□□ 0.46
ARHGAP19-SLIT1-202ENST00000479633 BAZ1BQ9UIG0 1483 aaKnown RBP17.9■□□□□ 0.46
ARHGAP19-SLIT1-202ENST00000479633 NCAPD3P42695 1498 aa17.79■□□□□ 0.44
ARHGAP19-SLIT1-202ENST00000479633 HMGXB3Q12766 1538 aa17.79■□□□□ 0.44
ARHGAP19-SLIT1-202ENST00000479633 LOC105371045A0A1W2PR82 267 aa17.76■□□□□ 0.43
ARHGAP19-SLIT1-202ENST00000479633 ABCC8Q09428 1581 aa17.74■□□□□ 0.43
ARHGAP19-SLIT1-202ENST00000479633 FAM9AQ8IZU1 332 aaPredicted RBP17.62■□□□□ 0.41
ARHGAP19-SLIT1-202ENST00000479633 WRNQ14191 1432 aaPredicted RBP eCLIP17.6■□□□□ 0.41
ARHGAP19-SLIT1-202ENST00000479633 CC2D2AQ9P2K1 1620 aa17.53■□□□□ 0.4
ARHGAP19-SLIT1-202ENST00000479633 SYNJ1O43426 1573 aa17.52■□□□□ 0.4
ARHGAP19-SLIT1-202ENST00000479633 EEA1Q15075 1411 aa17.49■□□□□ 0.39
ARHGAP19-SLIT1-202ENST00000479633 CFTRP13569 1480 aa17.48■□□□□ 0.39
ARHGAP19-SLIT1-202ENST00000479633 SOGA1O94964 1423 aa17.47■□□□□ 0.39
ARHGAP19-SLIT1-202ENST00000479633 TOP2BQ02880 1626 aa17.41■□□□□ 0.38
ARHGAP19-SLIT1-202ENST00000479633 RUSC2Q8N2Y8 1516 aa17.4■□□□□ 0.38
ARHGAP19-SLIT1-202ENST00000479633 BIVM-ERCC5R4GMW8 1640 aa17.39■□□□□ 0.37
ARHGAP19-SLIT1-202ENST00000479633 PRDM2Q13029 1718 aa17.36■□□□□ 0.37
ARHGAP19-SLIT1-202ENST00000479633 CSRNP3Q8WYN3 585 aa17.35■□□□□ 0.37
ARHGAP19-SLIT1-202ENST00000479633 EHMT2Q96KQ7 1210 aa17.35■□□□□ 0.37
ARHGAP19-SLIT1-202ENST00000479633 CADPSQ9ULU8 1353 aa17.35■□□□□ 0.37
ARHGAP19-SLIT1-202ENST00000479633 CUX1P39880 1505 aa17.31■□□□□ 0.36
ARHGAP19-SLIT1-202ENST00000479633 TNIKQ9UKE5 1360 aa17.27■□□□□ 0.36
ARHGAP19-SLIT1-202ENST00000479633 GOLGA3Q08378 1498 aa17.26■□□□□ 0.35
ARHGAP19-SLIT1-202ENST00000479633 KIF21BO75037 1637 aa17.25■□□□□ 0.35
ARHGAP19-SLIT1-202ENST00000479633 PCGF6Q9BYE7 350 aa17.23■□□□□ 0.35
ARHGAP19-SLIT1-202ENST00000479633 CEP164Q9UPV0 1460 aa17.23■□□□□ 0.35
ARHGAP19-SLIT1-202ENST00000479633 CEP162Q5TB80 1403 aa17.19■□□□□ 0.34
ARHGAP19-SLIT1-202ENST00000479633 TRIM26Q12899 539 aaPredicted RBP17.18■□□□□ 0.34
ARHGAP19-SLIT1-202ENST00000479633 FANCD2Q9BXW9 1451 aa17.16■□□□□ 0.34
ARHGAP19-SLIT1-202ENST00000479633 UBTFP17480 764 aaKnown RBP17.12■□□□□ 0.33
ARHGAP19-SLIT1-202ENST00000479633 LAMC3Q9Y6N6 1575 aa17.12■□□□□ 0.33
ARHGAP19-SLIT1-202ENST00000479633 KIF27Q86VH2 1401 aa17.11■□□□□ 0.33
ARHGAP19-SLIT1-202ENST00000479633 NESP48681 1621 aa17.11■□□□□ 0.33
ARHGAP19-SLIT1-202ENST00000479633 RAPGEF2Q9Y4G8 1499 aa17.1■□□□□ 0.33
ARHGAP19-SLIT1-202ENST00000479633 PRXQ9BXM0 1461 aa17.1■□□□□ 0.33
ARHGAP19-SLIT1-202ENST00000479633 ERICH3Q5RHP9 1530 aa17.08■□□□□ 0.33
ARHGAP19-SLIT1-202ENST00000479633 FGD5Q6ZNL6 1462 aa17.07■□□□□ 0.32
ARHGAP19-SLIT1-202ENST00000479633 DNMBPQ6XZF7 1577 aa17.06■□□□□ 0.32
ARHGAP19-SLIT1-202ENST00000479633 DNAJC5BQ9UF47 199 aa17.03■□□□□ 0.32
ARHGAP19-SLIT1-202ENST00000479633 TOPBP1Q92547 1522 aa17.01■□□□□ 0.31
ARHGAP19-SLIT1-202ENST00000479633 CUX2O14529 1486 aa17.01■□□□□ 0.31
ARHGAP19-SLIT1-202ENST00000479633 HRCP23327 699 aa17■□□□□ 0.31
ARHGAP19-SLIT1-202ENST00000479633 CLIP1P30622 1438 aa16.99■□□□□ 0.31
ARHGAP19-SLIT1-202ENST00000479633 PDS5BQ9NTI5 1447 aa16.97■□□□□ 0.31
ARHGAP19-SLIT1-202ENST00000479633 POLA1P09884 1462 aaPredicted RBP16.95■□□□□ 0.3
ARHGAP19-SLIT1-202ENST00000479633 IGF1RP08069 1367 aa16.95■□□□□ 0.3
ARHGAP19-SLIT1-202ENST00000479633 URB2Q14146 1524 aaKnown RBP16.94■□□□□ 0.3
ARHGAP19-SLIT1-202ENST00000479633 ABCA10Q8WWZ4 1543 aa16.94■□□□□ 0.3
ARHGAP19-SLIT1-202ENST00000479633 RAD54L2Q9Y4B4 1467 aa16.9■□□□□ 0.3
ARHGAP19-SLIT1-202ENST00000479633 VPS8Q8N3P4 1428 aa16.89■□□□□ 0.29
ARHGAP19-SLIT1-202ENST00000479633 PPARGC1BQ86YN6 1023 aaKnown RBP16.88■□□□□ 0.29
ARHGAP19-SLIT1-202ENST00000479633 KIF21AQ7Z4S6 1674 aa16.87■□□□□ 0.29
ARHGAP19-SLIT1-202ENST00000479633 CARMIL1Q5VZK9 1371 aa16.85■□□□□ 0.29
ARHGAP19-SLIT1-202ENST00000479633 WDR97A6NE52 1622 aa16.84■□□□□ 0.29
ARHGAP19-SLIT1-202ENST00000479633 ARAP1Q96P48 1450 aa16.81■□□□□ 0.28
ARHGAP19-SLIT1-202ENST00000479633 ABCA5Q8WWZ7 1642 aa16.77■□□□□ 0.28
ARHGAP19-SLIT1-202ENST00000479633 CUL7Q14999 1698 aa16.77■□□□□ 0.28
ARHGAP19-SLIT1-202ENST00000479633 MRC2Q9UBG0 1479 aa16.76■□□□□ 0.27
ARHGAP19-SLIT1-202ENST00000479633 RANGAP1P46060 587 aaPredicted RBP16.76■□□□□ 0.27
ARHGAP19-SLIT1-202ENST00000479633 ARHGAP35Q9NRY4 1499 aa16.75■□□□□ 0.27
ARHGAP19-SLIT1-202ENST00000479633 TARBP1Q13395 1621 aaKnown RBP16.73■□□□□ 0.27
ARHGAP19-SLIT1-202ENST00000479633 GAPVD1Q14C86 1478 aa16.71■□□□□ 0.26
ARHGAP19-SLIT1-202ENST00000479633 TDRD9Q8NDG6 1382 aaKnown RBP16.7■□□□□ 0.26
ARHGAP19-SLIT1-202ENST00000479633 TTBK1Q5TCY1 1321 aaPredicted RBP16.69■□□□□ 0.26
ARHGAP19-SLIT1-202ENST00000479633 WDR62O43379 1518 aa16.67■□□□□ 0.26
ARHGAP19-SLIT1-202ENST00000479633 APLP2Q06481 763 aa16.66■□□□□ 0.26
ARHGAP19-SLIT1-202ENST00000479633 ZEB1P37275 1124 aaPredicted RBP16.63■□□□□ 0.25
ARHGAP19-SLIT1-202ENST00000479633 CTTNBP2Q8WZ74 1663 aa16.61■□□□□ 0.25
ARHGAP19-SLIT1-202ENST00000479633 IFT140Q96RY7 1462 aa16.6■□□□□ 0.25
ARHGAP19-SLIT1-202ENST00000479633 EFCAB5A4FU69 1503 aa16.6■□□□□ 0.25
ARHGAP19-SLIT1-202ENST00000479633 PBRM1Q86U86 1689 aa16.57■□□□□ 0.24
ARHGAP19-SLIT1-202ENST00000479633 ERCC6Q03468 1493 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms