Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 CTSB-208ENST00000525076 550 ntTSL 517.85■□□□□ 0.452e-7■■□□□ 14
NKRFO15226 TCF25-226ENST00000640279 2688 ntTSL 517.76■□□□□ 0.432e-7■■□□□ 14
NKRFO15226 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.432e-7■■□□□ 14
NKRFO15226 CTSB-230ENST00000534149 524 ntTSL 417.6■□□□□ 0.412e-7■■□□□ 14
NKRFO15226 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.42e-7■■□□□ 14
NKRFO15226 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.52■□□□□ 0.42e-7■■□□□ 14
NKRFO15226 TMEM63B-208ENST00000532634 828 ntTSL 317.51■□□□□ 0.392e-7■■□□□ 14
NKRFO15226 TET3-204ENST00000496886 710 ntTSL 317.43■□□□□ 0.387e-6■■□□□ 14
NKRFO15226 CTSB-221ENST00000531502 557 ntTSL 416.94■□□□□ 0.32e-7■■□□□ 14
NKRFO15226 CTSB-224ENST00000532392 570 ntTSL 416.73■□□□□ 0.272e-7■■□□□ 14
NKRFO15226 CTSB-231ENST00000534382 764 ntTSL 416.73■□□□□ 0.272e-7■■□□□ 14
NKRFO15226 AKT2-207ENST00000416362 974 ntTSL 516.44■□□□□ 0.222e-7■■□□□ 14
NKRFO15226 AKT2-211ENST00000427375 554 ntTSL 416.44■□□□□ 0.222e-7■■□□□ 14
NKRFO15226 CTSB-217ENST00000530296 561 ntTSL 416.09■□□□□ 0.172e-7■■□□□ 14
NKRFO15226 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.161e-10■■□□□ 14
NKRFO15226 CNOT2-220ENST00000549750 1085 ntTSL 515.99■□□□□ 0.152e-7■■□□□ 14
NKRFO15226 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.112e-7■■□□□ 14
NKRFO15226 TCF25-221ENST00000568409 857 ntTSL 315.73■□□□□ 0.112e-7■■□□□ 14
NKRFO15226 TCF25-223ENST00000568870 263 ntTSL 215.73■□□□□ 0.112e-7■■□□□ 14
NKRFO15226 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.031e-10■■□□□ 14
NKRFO15226 RBP4-203ENST00000371469 814 ntTSL 5 BASIC14.97□□□□□ -0.012e-7■■□□□ 14
NKRFO15226 TMEM63B-210ENST00000534326 1934 ntTSL 214.33□□□□□ -0.122e-7■■□□□ 14
NKRFO15226 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.222e-7■■□□□ 14
NKRFO15226 CNOT2-241ENST00000552915 1071 ntTSL 513.53□□□□□ -0.242e-7■■□□□ 14
NKRFO15226 AKT2-224ENST00000492463 737 ntTSL 513.1□□□□□ -0.312e-7■■□□□ 14
NKRFO15226 CNOT2-223ENST00000550160 993 ntTSL 513.03□□□□□ -0.322e-7■■□□□ 14
NKRFO15226 CNOT2-202ENST00000418359 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.352e-7■■□□□ 14
NKRFO15226 CTSB-212ENST00000526645 559 ntTSL 412.85□□□□□ -0.352e-7■■□□□ 14
NKRFO15226 RBP4-204ENST00000629763 838 ntTSL 5 BASIC12.59□□□□□ -0.392e-7■■□□□ 14
NKRFO15226 CNOT2-239ENST00000552483 895 ntTSL 512.44□□□□□ -0.422e-7■■□□□ 14
NKRFO15226 CNOT2-201ENST00000229195 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.52e-7■■□□□ 14
NKRFO15226 AKT2-236ENST00000580747 525 ntTSL 411.43□□□□□ -0.582e-7■■□□□ 14
NKRFO15226 CNOT2-205ENST00000547321 577 ntTSL 211.08□□□□□ -0.642e-7■■□□□ 14
NKRFO15226 CNOT2-228ENST00000551132 618 ntTSL 311.08□□□□□ -0.642e-7■■□□□ 14
NKRFO15226 CNOT2-229ENST00000551179 355 ntTSL 211.08□□□□□ -0.642e-7■■□□□ 14
NKRFO15226 CNOT2-243ENST00000553078 440 ntTSL 311.08□□□□□ -0.642e-7■■□□□ 14
NKRFO15226 CNOT2-242ENST00000553020 576 ntTSL 511.08□□□□□ -0.642e-7■■□□□ 14
NKRFO15226 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.762e-7■■□□□ 14
NKRFO15226 CNOT2-232ENST00000551661 571 ntTSL 410.23□□□□□ -0.772e-7■■□□□ 14
NKRFO15226 CTSB-205ENST00000505496 540 ntTSL 410.03□□□□□ -0.82e-7■■□□□ 14
NKRFO15226 CNOT2-214ENST00000548741 536 ntTSL 410.02□□□□□ -0.812e-7■■□□□ 14
NKRFO15226 TCF25-219ENST00000566751 383 ntTSL 59.54□□□□□ -0.882e-7■■□□□ 14
NKRFO15226 CNOT2-225ENST00000550641 964 ntTSL 59.47□□□□□ -0.892e-7■■□□□ 14
NKRFO15226 CNOT2-208ENST00000548021 724 ntTSL 29.47□□□□□ -0.892e-7■■□□□ 14
NKRFO15226 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.967e-6■■□□□ 14
NKRFO15226 CNOT2-237ENST00000552319 783 ntTSL 58.28□□□□□ -1.082e-7■■□□□ 14
NKRFO15226 CNOT2-217ENST00000549443 457 ntTSL 48.28□□□□□ -1.082e-7■■□□□ 14
NKRFO15226 CNOT2-238ENST00000552422 443 ntTSL 37.58□□□□□ -1.22e-7■■□□□ 14
NKRFO15226 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.342e-7■■□□□ 14
NKRFO15226 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.49□□□□□ -1.532e-7■■□□□ 14
NKRFO15226 TMEM37-204ENST00000465296 820 ntTSL 319.2■□□□□ 0.661e-13■■□□□ 14
NKRFO15226 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.85■■□□□ 1.412e-6■■□□□ 14
NKRFO15226 RPH3AL-216ENST00000575130 579 ntTSL 419.41■□□□□ 0.74e-9■■□□□ 14
NKRFO15226 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.441e-7■■□□□ 14
NKRFO15226 ZNF644-211ENST00000498303 514 ntTSL 1 (best)16.5■□□□□ 0.232e-6■■□□□ 14
NKRFO15226 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.062e-6■■□□□ 14
NKRFO15226 ARHGEF2-220ENST00000609707 692 ntTSL 211.37□□□□□ -0.594e-9■■□□□ 14
NKRFO15226 ZNF644-210ENST00000495966 820 ntTSL 38.39□□□□□ -1.072e-6■■□□□ 14
NKRFO15226 ZNF644-205ENST00000467231 851 ntTSL 35.39□□□□□ -1.552e-6■■□□□ 14
NKRFO15226 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.47■□□□□ 0.233e-7■■□□□ 14
NKRFO15226 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.38■□□□□ 0.213e-7■■□□□ 14
NKRFO15226 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.213e-7■■□□□ 14
NKRFO15226 SLC25A39-205ENST00000585636 561 ntTSL 226.38■■□□□ 1.813e-6■■□□□ 14
NKRFO15226 SLC25A39-206ENST00000585695 1121 ntTSL 226.38■■□□□ 1.813e-6■■□□□ 14
NKRFO15226 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.38■■□□□ 1.813e-6■■□□□ 14
NKRFO15226 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.563e-6■■□□□ 14
NKRFO15226 SLC25A39-216ENST00000592857 837 ntTSL 324.52■■□□□ 1.523e-6■■□□□ 14
NKRFO15226 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.42■■□□□ 1.343e-6■■□□□ 14
NKRFO15226 SLC25A39-210ENST00000588315 1409 ntTSL 223.27■■□□□ 1.323e-6■■□□□ 14
NKRFO15226 SLC25A39-204ENST00000585523 574 ntTSL 422.82■■□□□ 1.243e-6■■□□□ 14
NKRFO15226 SLC25A39-209ENST00000588049 839 ntTSL 522.82■■□□□ 1.243e-6■■□□□ 14
NKRFO15226 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.13e-6■■□□□ 14
NKRFO15226 SLC25A39-208ENST00000586633 566 ntTSL 320.65■□□□□ 0.93e-6■■□□□ 14
NKRFO15226 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.16■□□□□ 0.53e-6■■□□□ 14
NKRFO15226 SLC25A39-214ENST00000591151 636 ntTSL 216.9■□□□□ 0.33e-6■■□□□ 14
NKRFO15226 PKD1P6-201ENST00000343738 4769 ntBASIC21.51■■□□□ 1.031e-6■■□□□ 13.9
NKRFO15226 SLC17A9-203ENST00000411611 565 ntTSL 216.22■□□□□ 0.192e-12■■□□□ 13.9
NKRFO15226 CDC42EP4-204ENST00000579611 580 ntTSL 419.72■□□□□ 0.756e-9■■□□□ 13.9
NKRFO15226 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.72■□□□□ 0.756e-9■■□□□ 13.9
NKRFO15226 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.526e-9■■□□□ 13.9
NKRFO15226 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.95■□□□□ 0.36e-9■■□□□ 13.9
NKRFO15226 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.333e-6■■□□□ 13.9
NKRFO15226 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC14.06□□□□□ -0.162e-6■■□□□ 13.9
NKRFO15226 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.511e-6■■□□□ 13.9
NKRFO15226 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.331e-6■■□□□ 13.9
NKRFO15226 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.32■□□□□ 0.21e-6■■□□□ 13.9
NKRFO15226 ACTN1-217ENST00000556203 564 ntTSL 317.48■□□□□ 0.391e-6■■□□□ 13.9
NKRFO15226 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.88■□□□□ 0.131e-6■■□□□ 13.9
NKRFO15226 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC15.06■□□□□ 01e-6■■□□□ 13.9
NKRFO15226 ACTN1-201ENST00000193403 3779 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.441e-6■■□□□ 13.9
NKRFO15226 ACTN1-203ENST00000394419 3464 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.541e-6■■□□□ 13.9
NKRFO15226 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.613e-7■■□□□ 13.9
NKRFO15226 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.56■□□□□ 0.563e-7■■□□□ 13.9
NKRFO15226 NAP1L4-207ENST00000469805 2294 ntTSL 318.03■□□□□ 0.483e-7■■□□□ 13.9
NKRFO15226 IQSEC1-203ENST00000474467 436 ntTSL 39.49□□□□□ -0.892e-6■■□□□ 13.9
NKRFO15226 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.9■□□□□ 0.624e-8■■□□□ 13.9
NKRFO15226 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.454e-8■■□□□ 13.9
NKRFO15226 PLEC-209ENST00000526416 583 ntTSL 319.41■□□□□ 0.72e-6■■□□□ 13.9
NKRFO15226 PLEC-212ENST00000527816 583 ntTSL 315.49■□□□□ 0.072e-6■■□□□ 13.9
NKRFO15226 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.852e-6■■□□□ 13.9
Retrieved 100 of 9,198 protein–RNA pairs in 281 ms