RNA–Protein interactions for RNA: ENST00000549750.5

CNOT2-220, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-220ENST00000549750 NISCHQ9Y2I1 1504 aa34.23■■■■□ 3.07
CNOT2-220ENST00000549750 ABCC9O60706 1549 aa31.19■■■□□ 2.58
CNOT2-220ENST00000549750 CCDC180Q9P1Z9 1646 aa30.72■■■□□ 2.51
CNOT2-220ENST00000549750 DNAJC5BQ9UF47 199 aa29.92■■■□□ 2.38
CNOT2-220ENST00000549750 RB1CC1Q8TDY2 1594 aa29.36■■■□□ 2.29
CNOT2-220ENST00000549750 NACADO15069 1562 aa29.01■■■□□ 2.24
CNOT2-220ENST00000549750 PABPN1Q86U42 306 aaKnown RBP eCLIP28.99■■■□□ 2.23
CNOT2-220ENST00000549750 DCAF8L2P0C7V8 631 aa28.84■■■□□ 2.21
CNOT2-220ENST00000549750 MYO15BQ96JP2 1530 aa28.71■■■□□ 2.19
CNOT2-220ENST00000549750 UNC13AQ9UPW8 1703 aa28.6■■■□□ 2.17
CNOT2-220ENST00000549750 BICRAQ9NZM4 1560 aa28.5■■■□□ 2.15
CNOT2-220ENST00000549750 ZCCHC6Q5VYS8 1495 aaKnown RBP28.42■■■□□ 2.14
CNOT2-220ENST00000549750 DCAF1Q9Y4B6 1507 aa28.38■■■□□ 2.13
CNOT2-220ENST00000549750 CECR2Q9BXF3 1484 aa28.19■■■□□ 2.1
CNOT2-220ENST00000549750 CC2D2AQ9P2K1 1620 aa28.1■■■□□ 2.09
CNOT2-220ENST00000549750 SHROOM4Q9ULL8 1493 aa28.08■■■□□ 2.09
CNOT2-220ENST00000549750 DNAJC5Q9H3Z4 198 aa28.01■■■□□ 2.07
CNOT2-220ENST00000549750 EIF4G1Q04637 1599 aaKnown RBP27.88■■■□□ 2.05
CNOT2-220ENST00000549750 SCRIBQ14160 1630 aa27.86■■■□□ 2.05
CNOT2-220ENST00000549750 CUX2O14529 1486 aa27.16■■□□□ 1.94
CNOT2-220ENST00000549750 ERCC6Q03468 1493 aa27■■□□□ 1.91
CNOT2-220ENST00000549750 NCAPD3P42695 1498 aa26.82■■□□□ 1.88
CNOT2-220ENST00000549750 SMARCA4P51532 1647 aa26.67■■□□□ 1.86
CNOT2-220ENST00000549750 ATAD2BQ9ULI0 1458 aa26.64■■□□□ 1.86
CNOT2-220ENST00000549750 SMARCA2P51531 1590 aa26.61■■□□□ 1.85
CNOT2-220ENST00000549750 NESP48681 1621 aa26.58■■□□□ 1.85
CNOT2-220ENST00000549750 BAZ1AQ9NRL2 1556 aaPredicted RBP26.58■■□□□ 1.85
CNOT2-220ENST00000549750 HMGXB3Q12766 1538 aa26.57■■□□□ 1.84
CNOT2-220ENST00000549750 TRIM41Q8WV44 630 aa26.49■■□□□ 1.83
CNOT2-220ENST00000549750 PEG3Q9GZU2 1588 aa26.48■■□□□ 1.83
CNOT2-220ENST00000549750 THOC2Q8NI27 1593 aaKnown RBP26.39■■□□□ 1.82
CNOT2-220ENST00000549750 BAZ1BQ9UIG0 1483 aaKnown RBP26.37■■□□□ 1.81
CNOT2-220ENST00000549750 MROH2BQ7Z745 1585 aa26.33■■□□□ 1.81
CNOT2-220ENST00000549750 LAMC3Q9Y6N6 1575 aa26.28■■□□□ 1.8
CNOT2-220ENST00000549750 PDS5BQ9NTI5 1447 aa26.22■■□□□ 1.79
CNOT2-220ENST00000549750 KIF21AQ7Z4S6 1674 aa26.15■■□□□ 1.78
CNOT2-220ENST00000549750 WIZO95785 1651 aa26.02■■□□□ 1.76
CNOT2-220ENST00000549750 CADPSQ9ULU8 1353 aa26■■□□□ 1.75
CNOT2-220ENST00000549750 MRC2Q9UBG0 1479 aa25.98■■□□□ 1.75
CNOT2-220ENST00000549750 OSCARQ8IYS5 282 aa25.91■■□□□ 1.74
CNOT2-220ENST00000549750 WDR62O43379 1518 aa25.91■■□□□ 1.74
CNOT2-220ENST00000549750 RSF1Q96T23 1441 aaPredicted RBP25.86■■□□□ 1.73
CNOT2-220ENST00000549750 TOP2AP11388 1531 aaKnown RBP25.76■■□□□ 1.71
CNOT2-220ENST00000549750 CEP164Q9UPV0 1460 aa25.74■■□□□ 1.71
CNOT2-220ENST00000549750 CFTRP13569 1480 aa25.66■■□□□ 1.7
CNOT2-220ENST00000549750 FANCD2Q9BXW9 1451 aa25.66■■□□□ 1.7
CNOT2-220ENST00000549750 RIMBP3CA6NJZ7 1639 aa25.5■■□□□ 1.67
CNOT2-220ENST00000549750 RIMBP3BA6NNM3 1639 aa25.5■■□□□ 1.67
CNOT2-220ENST00000549750 RIMBP3Q9UFD9 1639 aa25.5■■□□□ 1.67
CNOT2-220ENST00000549750 URB2Q14146 1524 aaKnown RBP25.47■■□□□ 1.67
CNOT2-220ENST00000549750 PRDM2Q13029 1718 aa25.46■■□□□ 1.67
CNOT2-220ENST00000549750 CCDC88BA6NC98 1476 aa25.41■■□□□ 1.66
CNOT2-220ENST00000549750 ARHGEF11O15085 1522 aa25.37■■□□□ 1.65
CNOT2-220ENST00000549750 CYB5RLQ6IPT4 315 aa25.34■■□□□ 1.65
CNOT2-220ENST00000549750 ZNF608Q9ULD9 1512 aaPredicted RBP25.28■■□□□ 1.64
CNOT2-220ENST00000549750 TRHP20396 242 aaPredicted RBP25.28■■□□□ 1.64
CNOT2-220ENST00000549750 IFT140Q96RY7 1462 aa25.28■■□□□ 1.64
CNOT2-220ENST00000549750 ABCC8Q09428 1581 aa25.14■■□□□ 1.61
CNOT2-220ENST00000549750 TOPBP1Q92547 1522 aa25.12■■□□□ 1.61
CNOT2-220ENST00000549750 ARAP1Q96P48 1450 aa25.09■■□□□ 1.61
CNOT2-220ENST00000549750 DNMBPQ6XZF7 1577 aa25.07■■□□□ 1.6
CNOT2-220ENST00000549750 AEBP2Q6ZN18 517 aaPredicted RBP25.07■■□□□ 1.6
CNOT2-220ENST00000549750 EIF4G3O43432 1585 aaKnown RBP25.05■■□□□ 1.6
CNOT2-220ENST00000549750 FBLN2P98095 1184 aa25.04■■□□□ 1.6
CNOT2-220ENST00000549750 AQRO60306 1485 aaKnown RBP eCLIP25.01■■□□□ 1.59
CNOT2-220ENST00000549750 CHD1O14646 1710 aa24.98■■□□□ 1.59
CNOT2-220ENST00000549750 TARBP1Q13395 1621 aaKnown RBP24.92■■□□□ 1.58
CNOT2-220ENST00000549750 POLA1P09884 1462 aaPredicted RBP24.88■■□□□ 1.57
CNOT2-220ENST00000549750 WDR97A6NE52 1622 aa24.76■■□□□ 1.55
CNOT2-220ENST00000549750 TDRD9Q8NDG6 1382 aaKnown RBP24.76■■□□□ 1.55
CNOT2-220ENST00000549750 CHMP7Q8WUX9 453 aaPredicted RBP24.75■■□□□ 1.55
CNOT2-220ENST00000549750 CUX1P39880 1505 aa24.74■■□□□ 1.55
CNOT2-220ENST00000549750 FGD5Q6ZNL6 1462 aa24.73■■□□□ 1.55
CNOT2-220ENST00000549750 RAD54L2Q9Y4B4 1467 aa24.73■■□□□ 1.55
CNOT2-220ENST00000549750 SOGA1O94964 1423 aa24.73■■□□□ 1.55
CNOT2-220ENST00000549750 CLASP1Q7Z460 1538 aa24.71■■□□□ 1.55
CNOT2-220ENST00000549750 SNAPC4Q5SXM2 1469 aa24.69■■□□□ 1.54
CNOT2-220ENST00000549750 SUPT5HO00267 1087 aaKnown RBP24.67■■□□□ 1.54
CNOT2-220ENST00000549750 SYNJ1O43426 1573 aa24.66■■□□□ 1.54
CNOT2-220ENST00000549750 MAGI1Q96QZ7 1491 aaPredicted RBP24.61■■□□□ 1.53
CNOT2-220ENST00000549750 GRIN2BQ13224 1484 aa24.56■■□□□ 1.52
CNOT2-220ENST00000549750 GAPVD1Q14C86 1478 aa24.56■■□□□ 1.52
CNOT2-220ENST00000549750 SYNJ2O15056 1496 aa24.55■■□□□ 1.52
CNOT2-220ENST00000549750 ABCA10Q8WWZ4 1543 aa24.51■■□□□ 1.51
CNOT2-220ENST00000549750 ABCA5Q8WWZ7 1642 aa24.46■■□□□ 1.51
CNOT2-220ENST00000549750 PBRM1Q86U86 1689 aa24.46■■□□□ 1.51
CNOT2-220ENST00000549750 BIVM-ERCC5R4GMW8 1640 aa24.44■■□□□ 1.5
CNOT2-220ENST00000549750 TOP2BQ02880 1626 aa24.43■■□□□ 1.5
CNOT2-220ENST00000549750 WRNQ14191 1432 aaPredicted RBP eCLIP24.4■■□□□ 1.5
CNOT2-220ENST00000549750 ERCC6L2Q5T890 1561 aa24.28■■□□□ 1.48
CNOT2-220ENST00000549750 ADAMTS12P58397 1594 aa24.25■■□□□ 1.47
CNOT2-220ENST00000549750 GRIN2AQ12879 1464 aa24.23■■□□□ 1.47
CNOT2-220ENST00000549750 ERICH3Q5RHP9 1530 aa24.21■■□□□ 1.47
CNOT2-220ENST00000549750 CEP170Q5SW79 1584 aa24.2■■□□□ 1.46
CNOT2-220ENST00000549750 FHAD1B1AJZ9 1412 aa24.18■■□□□ 1.46
CNOT2-220ENST00000549750 NUP160Q12769 1436 aa24.18■■□□□ 1.46
CNOT2-220ENST00000549750 KIF13AQ9H1H9 1805 aa24.12■■□□□ 1.45
CNOT2-220ENST00000549750 SHROOM2Q13796 1616 aa24.09■■□□□ 1.45
CNOT2-220ENST00000549750 FAM69CQ0P6D2 419 aa24.08■■□□□ 1.45
CNOT2-220ENST00000549750 PRG4Q92954 1404 aaPredicted RBP24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms