Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.047e-7■■■■□ 23.7
CSTF2TQ9H0L4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.037e-7■■■■□ 23.7
CSTF2TQ9H0L4 ITGB1-211ENST00000475184 552 ntTSL 415.19■□□□□ 0.021e-8■■■■□ 23.7
CSTF2TQ9H0L4 NDRG1-225ENST00000522890 581 ntTSL 515.15■□□□□ 0.027e-7■■■■□ 23.7
CSTF2TQ9H0L4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.017e-7■■■■□ 23.7
CSTF2TQ9H0L4 ITGB1-210ENST00000474568 788 ntTSL 515.01□□□□□ -0.011e-8■■■■□ 23.7
CSTF2TQ9H0L4 NDRG1-210ENST00000518480 558 ntTSL 414.8□□□□□ -0.047e-7■■■■□ 23.7
CSTF2TQ9H0L4 ITGB1-204ENST00000417122 569 ntTSL 414.68□□□□□ -0.061e-8■■■■□ 23.7
CSTF2TQ9H0L4 NDRG1-211ENST00000519228 729 ntTSL 414.33□□□□□ -0.127e-7■■■■□ 23.7
CSTF2TQ9H0L4 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.27e-7■■■■□ 23.7
CSTF2TQ9H0L4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.53□□□□□ -0.247e-7■■■■□ 23.7
CSTF2TQ9H0L4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.48□□□□□ -0.257e-7■■■■□ 23.7
CSTF2TQ9H0L4 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.267e-7■■■■□ 23.7
CSTF2TQ9H0L4 FCHO1-236ENST00000602111 781 ntTSL 313.39□□□□□ -0.277e-7■■■■□ 23.7
CSTF2TQ9H0L4 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.277e-7■■■■□ 23.7
CSTF2TQ9H0L4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.25□□□□□ -0.297e-7■■■■□ 23.7
CSTF2TQ9H0L4 TMBIM4-214ENST00000633367 876 ntTSL 1 (best)13.19□□□□□ -0.37e-7■■■■□ 23.7
CSTF2TQ9H0L4 NDRG1-214ENST00000520230 582 ntTSL 412.75□□□□□ -0.377e-7■■■■□ 23.7
CSTF2TQ9H0L4 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC12.69□□□□□ -0.387e-7■■■■□ 23.7
CSTF2TQ9H0L4 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.69□□□□□ -0.387e-7■■■■□ 23.7
CSTF2TQ9H0L4 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.3□□□□□ -0.447e-7■■■■□ 23.7
CSTF2TQ9H0L4 NDRG1-206ENST00000518010 581 ntTSL 412.23□□□□□ -0.457e-7■■■■□ 23.7
CSTF2TQ9H0L4 NDRG1-219ENST00000521544 709 ntTSL 512.2□□□□□ -0.467e-7■■■■□ 23.7
CSTF2TQ9H0L4 NDRG1-213ENST00000519580 550 ntTSL 512.2□□□□□ -0.467e-7■■■■□ 23.7
CSTF2TQ9H0L4 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC11.95□□□□□ -0.57e-7■■■■□ 23.7
CSTF2TQ9H0L4 NDRG1-221ENST00000522377 1103 ntTSL 511.86□□□□□ -0.517e-7■■■■□ 23.7
CSTF2TQ9H0L4 FCHO1-208ENST00000595033 2907 ntTSL 2 BASIC11.62□□□□□ -0.557e-7■■■■□ 23.7
CSTF2TQ9H0L4 TMBIM4-211ENST00000545504 409 ntTSL 311.53□□□□□ -0.567e-7■■■■□ 23.7
CSTF2TQ9H0L4 TMLHE-201ENST00000334398 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.577e-7■■■■□ 23.7
CSTF2TQ9H0L4 GAB1-212ENST00000514639 728 ntTSL 311.34□□□□□ -0.597e-7■■■■□ 23.7
CSTF2TQ9H0L4 FCHO1-234ENST00000600676 3094 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.597e-7■■■■□ 23.7
CSTF2TQ9H0L4 NDRG1-204ENST00000517599 2918 ntTSL 211.15□□□□□ -0.637e-7■■■■□ 23.7
CSTF2TQ9H0L4 NDRG1-229ENST00000537882 2975 ntTSL 2 BASIC11.11□□□□□ -0.637e-7■■■■□ 23.7
CSTF2TQ9H0L4 NDRG1-207ENST00000518066 560 ntTSL 5 BASIC11.03□□□□□ -0.647e-7■■■■□ 23.7
CSTF2TQ9H0L4 FCHO1-218ENST00000596951 2979 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.657e-7■■■■□ 23.7
CSTF2TQ9H0L4 NDRG1-224ENST00000522738 530 ntTSL 510.84□□□□□ -0.677e-7■■■■□ 23.7
CSTF2TQ9H0L4 NDRG1-201ENST00000323851 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.727e-7■■■■□ 23.7
CSTF2TQ9H0L4 NQO2-206ENST00000380472 689 ntTSL 510.45□□□□□ -0.747e-7■■■■□ 23.7
CSTF2TQ9H0L4 FCHO1-216ENST00000596536 3204 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.777e-7■■■■□ 23.7
CSTF2TQ9H0L4 TMBIM4-209ENST00000544599 2240 ntTSL 1 (best) BASIC9.71□□□□□ -0.857e-7■■■■□ 23.7
CSTF2TQ9H0L4 NDRG1-215ENST00000520943 536 ntTSL 49.55□□□□□ -0.887e-7■■■■□ 23.7
CSTF2TQ9H0L4 DYRK1A-204ENST00000398960 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.927e-7■■■■□ 23.7
CSTF2TQ9H0L4 AC078927.1-201ENST00000539652 984 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.947e-7■■■■□ 23.7
CSTF2TQ9H0L4 NDRG1-227ENST00000523892 562 ntTSL 48.24□□□□□ -1.097e-7■■■■□ 23.7
CSTF2TQ9H0L4 NQO2-208ENST00000426637 626 ntTSL 57.76□□□□□ -1.177e-7■■■■□ 23.7
CSTF2TQ9H0L4 TMBIM4-210ENST00000545407 1303 ntTSL 57.74□□□□□ -1.177e-7■■■■□ 23.7
CSTF2TQ9H0L4 SKIV2L2-201ENST00000230640 4192 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.187e-7■■■■□ 23.7
CSTF2TQ9H0L4 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC7.67□□□□□ -1.187e-7■■■■□ 23.7
CSTF2TQ9H0L4 PPP2R5C-229ENST00000557621 759 ntTSL 57.6□□□□□ -1.197e-7■■■■□ 23.7
CSTF2TQ9H0L4 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC7.59□□□□□ -1.197e-7■■■■□ 23.7
CSTF2TQ9H0L4 TAF7-202ENST00000624699 517 ntTSL 37.49□□□□□ -1.217e-7■■■■□ 23.7
CSTF2TQ9H0L4 TMLHE-205ENST00000474677 298 ntTSL 37.41□□□□□ -1.227e-7■■■■□ 23.7
CSTF2TQ9H0L4 FICD-203ENST00000549641 397 ntTSL 37.23□□□□□ -1.257e-7■■■■□ 23.7
CSTF2TQ9H0L4 PPP2R5C-220ENST00000556373 285 ntTSL 57.21□□□□□ -1.267e-7■■■■□ 23.7
CSTF2TQ9H0L4 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.287e-7■■■■□ 23.7
CSTF2TQ9H0L4 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC7.05□□□□□ -1.287e-7■■■■□ 23.7
CSTF2TQ9H0L4 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC6.99□□□□□ -1.297e-7■■■■□ 23.7
CSTF2TQ9H0L4 ITGB1-219ENST00000534049 562 ntTSL 46.58□□□□□ -1.361e-8■■■■□ 23.7
CSTF2TQ9H0L4 ITGB1-218ENST00000528877 546 ntTSL 46.58□□□□□ -1.361e-8■■■■□ 23.7
CSTF2TQ9H0L4 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.53□□□□□ -1.367e-7■■■■□ 23.7
CSTF2TQ9H0L4 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.431e-8■■■■□ 23.7
CSTF2TQ9H0L4 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.07□□□□□ -1.447e-7■■■■□ 23.7
CSTF2TQ9H0L4 TMBIM4-204ENST00000534930 571 ntTSL 55.76□□□□□ -1.497e-7■■■■□ 23.7
CSTF2TQ9H0L4 ITGB1-203ENST00000414670 500 ntTSL 35.71□□□□□ -1.51e-8■■■■□ 23.7
CSTF2TQ9H0L4 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.7□□□□□ -1.57e-7■■■■□ 23.7
CSTF2TQ9H0L4 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.67□□□□□ -1.57e-7■■■■□ 23.7
CSTF2TQ9H0L4 PPP2R5C-221ENST00000556493 457 ntTSL 45.28□□□□□ -1.567e-7■■■■□ 23.7
CSTF2TQ9H0L4 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.03□□□□□ -1.67e-7■■■■□ 23.7
CSTF2TQ9H0L4 PPP2R5C-219ENST00000556307 601 ntTSL 34.54□□□□□ -1.687e-7■■■■□ 23.7
CSTF2TQ9H0L4 DYRK1A-208ENST00000498351 224 ntTSL 1 (best)4.3□□□□□ -1.727e-7■■■■□ 23.7
CSTF2TQ9H0L4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.777e-7■■■■□ 23.7
CSTF2TQ9H0L4 SKIV2L2-207ENST00000506750 3271 ntTSL 23.99□□□□□ -1.777e-7■■■■□ 23.7
CSTF2TQ9H0L4 ITGB1-213ENST00000484088 580 ntTSL 43.56□□□□□ -1.841e-8■■■■□ 23.7
CSTF2TQ9H0L4 DDX3X-212ENST00000616050 818 ntTSL 510.6□□□□□ -0.713e-9■■■■□ 23.7
CSTF2TQ9H0L4 PKD1P1-201ENST00000458669 6805 ntBASIC16.77■□□□□ 0.275e-7■■■■□ 23.7
CSTF2TQ9H0L4 TPGS1-202ENST00000588278 2873 nt14.9□□□□□ -0.023e-7■■■■□ 23.7
CSTF2TQ9H0L4 AC138969.1-203ENST00000537112 4514 ntTSL 512.39□□□□□ -0.435e-7■■■■□ 23.7
CSTF2TQ9H0L4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.45■■□□□ 1.826e-11■■■■□ 23.7
CSTF2TQ9H0L4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.685e-7■■■■□ 23.7
CSTF2TQ9H0L4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.15■□□□□ 0.665e-7■■■■□ 23.7
CSTF2TQ9H0L4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.625e-7■■■■□ 23.7
CSTF2TQ9H0L4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.22■□□□□ 0.195e-7■■■■□ 23.7
CSTF2TQ9H0L4 NSMCE1-209ENST00000565384 580 ntTSL 311.02□□□□□ -0.651e-6■■■■□ 23.7
CSTF2TQ9H0L4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.1■□□□□ 0.177e-7■■■■□ 23.7
CSTF2TQ9H0L4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.077e-7■■■■□ 23.7
CSTF2TQ9H0L4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.217e-7■■■■□ 23.7
CSTF2TQ9H0L4 INPP5B-203ENST00000373024 3060 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.677e-7■■■■□ 23.7
CSTF2TQ9H0L4 INPP5B-206ENST00000458109 3979 ntTSL 1 (best) BASIC9.46□□□□□ -0.97e-7■■■■□ 23.7
CSTF2TQ9H0L4 INPP5B-205ENST00000373027 3905 ntTSL 2 BASIC7.75□□□□□ -1.177e-7■■■■□ 23.7
CSTF2TQ9H0L4 PPP2R3B-208ENST00000479438 1090 ntTSL 219.53■□□□□ 0.722e-7■■■■□ 23.7
CSTF2TQ9H0L4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.61■■□□□ 1.211e-7■■■■□ 23.7
CSTF2TQ9H0L4 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.491e-7■■■■□ 23.7
CSTF2TQ9H0L4 ABL2-210ENST00000511413 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.521e-7■■■■□ 23.7
CSTF2TQ9H0L4 ABL2-202ENST00000367623 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.571e-7■■■■□ 23.7
CSTF2TQ9H0L4 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.611e-7■■■■□ 23.7
CSTF2TQ9H0L4 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC12.02□□□□□ -0.491e-6■■■■□ 23.7
CSTF2TQ9H0L4 BRD9-218ENST00000519838 396 ntTSL 213.09□□□□□ -0.313e-7■■■■□ 23.7
CSTF2TQ9H0L4 WDR1-206ENST00000502962 1411 ntTSL 515.5■□□□□ 0.074e-7■■■■□ 23.7
CSTF2TQ9H0L4 METTL12-202ENST00000529868 2870 ntTSL 1 (best)13.89□□□□□ -0.191e-7■■■■□ 23.7
CSTF2TQ9H0L4 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.461e-7■■■■□ 23.7
Retrieved 100 of 19,151 protein–RNA pairs in 1515.3 ms