RNA–Protein interactions for RNA: ENST00000539652.1

AC078927.1-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC078927.1, Length 984 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078927.1-201ENST00000539652 NISCHQ9Y2I1 1504 aa24.52■■□□□ 1.52
AC078927.1-201ENST00000539652 AEBP2Q6ZN18 517 aaPredicted RBP23.9■■□□□ 1.42
AC078927.1-201ENST00000539652 ABCC9O60706 1549 aa22.67■■□□□ 1.22
AC078927.1-201ENST00000539652 CHIC1Q5VXU3 224 aa22.24■■□□□ 1.15
AC078927.1-201ENST00000539652 CCDC180Q9P1Z9 1646 aa22.14■■□□□ 1.14
AC078927.1-201ENST00000539652 DNAJC5BQ9UF47 199 aa21.58■■□□□ 1.05
AC078927.1-201ENST00000539652 RB1CC1Q8TDY2 1594 aa21.28■■□□□ 1
AC078927.1-201ENST00000539652 PABPN1Q86U42 306 aaKnown RBP eCLIP21.06■□□□□ 0.96
AC078927.1-201ENST00000539652 DCAF8L2P0C7V8 631 aa21.03■□□□□ 0.96
AC078927.1-201ENST00000539652 NACADO15069 1562 aa21■□□□□ 0.95
AC078927.1-201ENST00000539652 UNC13AQ9UPW8 1703 aa20.9■□□□□ 0.94
AC078927.1-201ENST00000539652 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
AC078927.1-201ENST00000539652 MYO15BQ96JP2 1530 aa20.48■□□□□ 0.87
AC078927.1-201ENST00000539652 SENP3Q9H4L4 574 aaPredicted RBP20.45■□□□□ 0.86
AC078927.1-201ENST00000539652 CC2D2AQ9P2K1 1620 aa20.41■□□□□ 0.86
AC078927.1-201ENST00000539652 CECR2Q9BXF3 1484 aa20.39■□□□□ 0.85
AC078927.1-201ENST00000539652 SCRIBQ14160 1630 aa20.31■□□□□ 0.84
AC078927.1-201ENST00000539652 ZCCHC6Q5VYS8 1495 aaKnown RBP20.25■□□□□ 0.83
AC078927.1-201ENST00000539652 EIF4G1Q04637 1599 aaKnown RBP20.25■□□□□ 0.83
AC078927.1-201ENST00000539652 SHROOM4Q9ULL8 1493 aa20.22■□□□□ 0.83
AC078927.1-201ENST00000539652 DCAF1Q9Y4B6 1507 aa20.12■□□□□ 0.81
AC078927.1-201ENST00000539652 PHF23Q9BUL5 403 aaPredicted RBP20.08■□□□□ 0.81
AC078927.1-201ENST00000539652 DNAJC5Q9H3Z4 198 aa19.98■□□□□ 0.79
AC078927.1-201ENST00000539652 ERCC6Q03468 1493 aa19.56■□□□□ 0.72
AC078927.1-201ENST00000539652 CUX2O14529 1486 aa19.54■□□□□ 0.72
AC078927.1-201ENST00000539652 POTEDQ86YR6 584 aa19.4■□□□□ 0.7
AC078927.1-201ENST00000539652 NCAPD3P42695 1498 aa19.38■□□□□ 0.69
AC078927.1-201ENST00000539652 NESP48681 1621 aa19.37■□□□□ 0.69
AC078927.1-201ENST00000539652 ATAD2BQ9ULI0 1458 aa19.34■□□□□ 0.69
AC078927.1-201ENST00000539652 SMARCA4P51532 1647 aa19.25■□□□□ 0.67
AC078927.1-201ENST00000539652 HMGXB3Q12766 1538 aa19.23■□□□□ 0.67
AC078927.1-201ENST00000539652 SMARCA2P51531 1590 aa19.23■□□□□ 0.67
AC078927.1-201ENST00000539652 FOXD1Q16676 465 aa19.22■□□□□ 0.67
AC078927.1-201ENST00000539652 THOC2Q8NI27 1593 aaKnown RBP19.19■□□□□ 0.66
AC078927.1-201ENST00000539652 BAZ1BQ9UIG0 1483 aaKnown RBP19.16■□□□□ 0.66
AC078927.1-201ENST00000539652 TRIM41Q8WV44 630 aa19.14■□□□□ 0.65
AC078927.1-201ENST00000539652 KIF21AQ7Z4S6 1674 aa19.11■□□□□ 0.65
AC078927.1-201ENST00000539652 BAZ1AQ9NRL2 1556 aaPredicted RBP19.05■□□□□ 0.64
AC078927.1-201ENST00000539652 LAMC3Q9Y6N6 1575 aa19.04■□□□□ 0.64
AC078927.1-201ENST00000539652 PEG3Q9GZU2 1588 aa18.97■□□□□ 0.63
AC078927.1-201ENST00000539652 MROH2BQ7Z745 1585 aa18.96■□□□□ 0.63
AC078927.1-201ENST00000539652 PDS5BQ9NTI5 1447 aa18.93■□□□□ 0.62
AC078927.1-201ENST00000539652 MRC2Q9UBG0 1479 aa18.84■□□□□ 0.61
AC078927.1-201ENST00000539652 CADPSQ9ULU8 1353 aa18.81■□□□□ 0.6
AC078927.1-201ENST00000539652 WDR62O43379 1518 aa18.79■□□□□ 0.6
AC078927.1-201ENST00000539652 WIZO95785 1651 aa18.76■□□□□ 0.59
AC078927.1-201ENST00000539652 CEP164Q9UPV0 1460 aa18.71■□□□□ 0.59
AC078927.1-201ENST00000539652 FANCD2Q9BXW9 1451 aa18.65■□□□□ 0.58
AC078927.1-201ENST00000539652 OSCARQ8IYS5 282 aa18.61■□□□□ 0.57
AC078927.1-201ENST00000539652 URB2Q14146 1524 aaKnown RBP18.54■□□□□ 0.56
AC078927.1-201ENST00000539652 CFTRP13569 1480 aa18.51■□□□□ 0.55
AC078927.1-201ENST00000539652 RIMBP3CA6NJZ7 1639 aa18.5■□□□□ 0.55
AC078927.1-201ENST00000539652 RIMBP3BA6NNM3 1639 aa18.5■□□□□ 0.55
AC078927.1-201ENST00000539652 RIMBP3Q9UFD9 1639 aa18.5■□□□□ 0.55
AC078927.1-201ENST00000539652 ZNF608Q9ULD9 1512 aaPredicted RBP18.41■□□□□ 0.54
AC078927.1-201ENST00000539652 TOP2AP11388 1531 aaKnown RBP18.4■□□□□ 0.54
AC078927.1-201ENST00000539652 RSF1Q96T23 1441 aaPredicted RBP18.39■□□□□ 0.53
AC078927.1-201ENST00000539652 ARHGEF11O15085 1522 aa18.38■□□□□ 0.53
AC078927.1-201ENST00000539652 PRDM2Q13029 1718 aa18.35■□□□□ 0.53
AC078927.1-201ENST00000539652 CYB5RLQ6IPT4 315 aa18.3■□□□□ 0.52
AC078927.1-201ENST00000539652 IFT140Q96RY7 1462 aa18.3■□□□□ 0.52
AC078927.1-201ENST00000539652 EIF4G3O43432 1585 aaKnown RBP18.28■□□□□ 0.52
AC078927.1-201ENST00000539652 MSH5O43196 834 aa18.26■□□□□ 0.51
AC078927.1-201ENST00000539652 TOPBP1Q92547 1522 aa18.26■□□□□ 0.51
AC078927.1-201ENST00000539652 TRHP20396 242 aaPredicted RBP18.25■□□□□ 0.51
AC078927.1-201ENST00000539652 CHD1O14646 1710 aa18.25■□□□□ 0.51
AC078927.1-201ENST00000539652 CCDC88BA6NC98 1476 aa18.22■□□□□ 0.51
AC078927.1-201ENST00000539652 FBLN2P98095 1184 aa18.19■□□□□ 0.5
AC078927.1-201ENST00000539652 AQRO60306 1485 aaKnown RBP eCLIP18.19■□□□□ 0.5
AC078927.1-201ENST00000539652 ARAP1Q96P48 1450 aa18.19■□□□□ 0.5
AC078927.1-201ENST00000539652 DNMBPQ6XZF7 1577 aa18.14■□□□□ 0.49
AC078927.1-201ENST00000539652 TARBP1Q13395 1621 aaKnown RBP18.12■□□□□ 0.49
AC078927.1-201ENST00000539652 ABCC8Q09428 1581 aa18.07■□□□□ 0.48
AC078927.1-201ENST00000539652 POLA1P09884 1462 aaPredicted RBP18.05■□□□□ 0.48
AC078927.1-201ENST00000539652 RAD54L2Q9Y4B4 1467 aa18.05■□□□□ 0.48
AC078927.1-201ENST00000539652 TDRD9Q8NDG6 1382 aaKnown RBP18.02■□□□□ 0.47
AC078927.1-201ENST00000539652 SNAPC4Q5SXM2 1469 aa17.99■□□□□ 0.47
AC078927.1-201ENST00000539652 SOGA1O94964 1423 aa17.95■□□□□ 0.46
AC078927.1-201ENST00000539652 CLASP1Q7Z460 1538 aa17.94■□□□□ 0.46
AC078927.1-201ENST00000539652 FGD5Q6ZNL6 1462 aa17.91■□□□□ 0.46
AC078927.1-201ENST00000539652 CHMP7Q8WUX9 453 aaPredicted RBP17.91■□□□□ 0.46
AC078927.1-201ENST00000539652 SYNJ1O43426 1573 aa17.89■□□□□ 0.45
AC078927.1-201ENST00000539652 CUX1P39880 1505 aa17.83■□□□□ 0.45
AC078927.1-201ENST00000539652 MAGI1Q96QZ7 1491 aaPredicted RBP17.82■□□□□ 0.44
AC078927.1-201ENST00000539652 GRIN2BQ13224 1484 aa17.82■□□□□ 0.44
AC078927.1-201ENST00000539652 PBRM1Q86U86 1689 aa17.8■□□□□ 0.44
AC078927.1-201ENST00000539652 SYNJ2O15056 1496 aa17.8■□□□□ 0.44
AC078927.1-201ENST00000539652 GAPVD1Q14C86 1478 aa17.8■□□□□ 0.44
AC078927.1-201ENST00000539652 PLPPR3Q6T4P5 718 aa17.79■□□□□ 0.44
AC078927.1-201ENST00000539652 WDR97A6NE52 1622 aa17.79■□□□□ 0.44
AC078927.1-201ENST00000539652 ERCC6L2Q5T890 1561 aa17.74■□□□□ 0.43
AC078927.1-201ENST00000539652 PIAS4Q8N2W9 510 aaPredicted RBP17.73■□□□□ 0.43
AC078927.1-201ENST00000539652 ABCA5Q8WWZ7 1642 aa17.66■□□□□ 0.42
AC078927.1-201ENST00000539652 GRIN2AQ12879 1464 aa17.61■□□□□ 0.41
AC078927.1-201ENST00000539652 ABCA10Q8WWZ4 1543 aa17.61■□□□□ 0.41
AC078927.1-201ENST00000539652 CEP170Q5SW79 1584 aa17.61■□□□□ 0.41
AC078927.1-201ENST00000539652 ADAMTS12P58397 1594 aa17.57■□□□□ 0.4
AC078927.1-201ENST00000539652 KIF13AQ9H1H9 1805 aa17.56■□□□□ 0.4
AC078927.1-201ENST00000539652 NUP160Q12769 1436 aa17.53■□□□□ 0.4
AC078927.1-201ENST00000539652 SHROOM2Q13796 1616 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms