RNA–Protein interactions for RNA: ENST00000588278.1

TPGS1-202, Transcript of tubulin polyglutamylase complex subunit 1, humanhuman

Gene TPGS1, Length 2,873 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS1-202ENST00000588278 NISCHQ9Y2I1 1504 aa31.16■■■□□ 2.58
TPGS1-202ENST00000588278 SHROOM4Q9ULL8 1493 aa27.28■■□□□ 1.96
TPGS1-202ENST00000588278 DCAF8L2P0C7V8 631 aa26.8■■□□□ 1.88
TPGS1-202ENST00000588278 SUPT5HO00267 1087 aaKnown RBP26.77■■□□□ 1.88
TPGS1-202ENST00000588278 CCDC180Q9P1Z9 1646 aa26.53■■□□□ 1.84
TPGS1-202ENST00000588278 ZCCHC6Q5VYS8 1495 aaKnown RBP26.27■■□□□ 1.8
TPGS1-202ENST00000588278 HRCP23327 699 aa26.23■■□□□ 1.79
TPGS1-202ENST00000588278 PPARGC1BQ86YN6 1023 aaKnown RBP26.07■■□□□ 1.76
TPGS1-202ENST00000588278 PCGF6Q9BYE7 350 aa25.95■■□□□ 1.75
TPGS1-202ENST00000588278 MYO15BQ96JP2 1530 aa25.74■■□□□ 1.71
TPGS1-202ENST00000588278 CHIC1Q5VXU3 224 aa25.66■■□□□ 1.7
TPGS1-202ENST00000588278 DCAF1Q9Y4B6 1507 aa25.37■■□□□ 1.65
TPGS1-202ENST00000588278 LOC105371045A0A1W2PR82 267 aa25.18■■□□□ 1.62
TPGS1-202ENST00000588278 ABCC9O60706 1549 aa25.12■■□□□ 1.61
TPGS1-202ENST00000588278 SCRIBQ14160 1630 aa25.06■■□□□ 1.6
TPGS1-202ENST00000588278 SCAF1Q9H7N4 1312 aaKnown RBP24.96■■□□□ 1.59
TPGS1-202ENST00000588278 PELP1Q8IZL8 1130 aaKnown RBP24.96■■□□□ 1.59
TPGS1-202ENST00000588278 EHMT2Q96KQ7 1210 aa24.91■■□□□ 1.58
TPGS1-202ENST00000588278 FAM9AQ8IZU1 332 aaPredicted RBP24.86■■□□□ 1.57
TPGS1-202ENST00000588278 TRIM26Q12899 539 aaPredicted RBP24.82■■□□□ 1.56
TPGS1-202ENST00000588278 RSF1Q96T23 1441 aaPredicted RBP24.78■■□□□ 1.56
TPGS1-202ENST00000588278 TRIM41Q8WV44 630 aa24.75■■□□□ 1.55
TPGS1-202ENST00000588278 NACADO15069 1562 aa24.62■■□□□ 1.53
TPGS1-202ENST00000588278 CECR2Q9BXF3 1484 aa24.55■■□□□ 1.52
TPGS1-202ENST00000588278 RB1CC1Q8TDY2 1594 aa24.52■■□□□ 1.52
TPGS1-202ENST00000588278 ZEB1P37275 1124 aaPredicted RBP24.43■■□□□ 1.5
TPGS1-202ENST00000588278 MROH2BQ7Z745 1585 aa24.36■■□□□ 1.49
TPGS1-202ENST00000588278 NEUROD1Q13562 356 aa24.3■■□□□ 1.48
TPGS1-202ENST00000588278 WIZO95785 1651 aa24.21■■□□□ 1.47
TPGS1-202ENST00000588278 ACIN1Q9UKV3 1341 aaKnown RBP24.21■■□□□ 1.47
TPGS1-202ENST00000588278 GTF3C3Q9Y5Q9 886 aa24.17■■□□□ 1.46
TPGS1-202ENST00000588278 PABPN1Q86U42 306 aaKnown RBP eCLIP24.14■■□□□ 1.45
TPGS1-202ENST00000588278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.08■■□□□ 1.44
TPGS1-202ENST00000588278 TTBK1Q5TCY1 1321 aaPredicted RBP24.04■■□□□ 1.44
TPGS1-202ENST00000588278 UNC13AQ9UPW8 1703 aa23.98■■□□□ 1.43
TPGS1-202ENST00000588278 CCER1Q8TC90 406 aaPredicted RBP23.91■■□□□ 1.42
TPGS1-202ENST00000588278 BAZ1AQ9NRL2 1556 aaPredicted RBP23.91■■□□□ 1.42
TPGS1-202ENST00000588278 DIEXFQ68CQ4 756 aaKnown RBP23.87■■□□□ 1.41
TPGS1-202ENST00000588278 MYT1Q01538 1121 aa23.83■■□□□ 1.41
TPGS1-202ENST00000588278 CENPBP07199 599 aaPredicted RBP23.82■■□□□ 1.4
TPGS1-202ENST00000588278 ABCC8Q09428 1581 aa23.81■■□□□ 1.4
TPGS1-202ENST00000588278 YTHDC1Q96MU7 727 aaKnown RBP23.78■■□□□ 1.4
TPGS1-202ENST00000588278 CCDC88BA6NC98 1476 aa23.76■■□□□ 1.39
TPGS1-202ENST00000588278 SMARCA4P51532 1647 aa23.7■■□□□ 1.39
TPGS1-202ENST00000588278 UBTFP17480 764 aaKnown RBP23.7■■□□□ 1.38
TPGS1-202ENST00000588278 BICRAQ9NZM4 1560 aa23.69■■□□□ 1.38
TPGS1-202ENST00000588278 TOP2AP11388 1531 aaKnown RBP23.66■■□□□ 1.38
TPGS1-202ENST00000588278 SOGA1O94964 1423 aa23.63■■□□□ 1.37
TPGS1-202ENST00000588278 RANGAP1P46060 587 aaPredicted RBP23.58■■□□□ 1.37
TPGS1-202ENST00000588278 SMARCA2P51531 1590 aa23.58■■□□□ 1.37
TPGS1-202ENST00000588278 EIF4G1Q04637 1599 aaKnown RBP23.53■■□□□ 1.36
TPGS1-202ENST00000588278 CSRNP3Q8WYN3 585 aa23.52■■□□□ 1.36
TPGS1-202ENST00000588278 RUSC2Q8N2Y8 1516 aa23.51■■□□□ 1.35
TPGS1-202ENST00000588278 CEP162Q5TB80 1403 aa23.43■■□□□ 1.34
TPGS1-202ENST00000588278 MIER1Q8N108 512 aa23.34■■□□□ 1.33
TPGS1-202ENST00000588278 WRNQ14191 1432 aaPredicted RBP eCLIP23.34■■□□□ 1.33
TPGS1-202ENST00000588278 ZNF316A6NFI3 1004 aaPredicted RBP23.32■■□□□ 1.32
TPGS1-202ENST00000588278 TNIKQ9UKE5 1360 aa23.27■■□□□ 1.32
TPGS1-202ENST00000588278 BAZ1BQ9UIG0 1483 aaKnown RBP23.23■■□□□ 1.31
TPGS1-202ENST00000588278 PEG3Q9GZU2 1588 aa23.22■■□□□ 1.31
TPGS1-202ENST00000588278 ATAD2BQ9ULI0 1458 aa23.22■■□□□ 1.31
TPGS1-202ENST00000588278 HNRNPUL2Q1KMD3 747 aaKnown RBP23.21■■□□□ 1.31
TPGS1-202ENST00000588278 GOLGA3Q08378 1498 aa23.16■■□□□ 1.3
TPGS1-202ENST00000588278 EEA1Q15075 1411 aa23.15■■□□□ 1.3
TPGS1-202ENST00000588278 SYNJ1O43426 1573 aa23.12■■□□□ 1.29
TPGS1-202ENST00000588278 APLP2Q06481 763 aa23.11■■□□□ 1.29
TPGS1-202ENST00000588278 CLIP1P30622 1438 aa23.03■■□□□ 1.28
TPGS1-202ENST00000588278 CEP164Q9UPV0 1460 aa23■■□□□ 1.27
TPGS1-202ENST00000588278 RAPGEF2Q9Y4G8 1499 aa22.99■■□□□ 1.27
TPGS1-202ENST00000588278 SUPT16HQ9Y5B9 1047 aaKnown RBP22.92■■□□□ 1.26
TPGS1-202ENST00000588278 BCL11AQ9H165 835 aa22.83■■□□□ 1.25
TPGS1-202ENST00000588278 TSHZ2Q9NRE2 1034 aa22.82■■□□□ 1.24
TPGS1-202ENST00000588278 NCAPD3P42695 1498 aa22.81■■□□□ 1.24
TPGS1-202ENST00000588278 VPS8Q8N3P4 1428 aa22.8■■□□□ 1.24
TPGS1-202ENST00000588278 ANP32EQ9BTT0 268 aa22.77■■□□□ 1.24
TPGS1-202ENST00000588278 KIF21BO75037 1637 aa22.77■■□□□ 1.24
TPGS1-202ENST00000588278 ITGAEP38570 1179 aa22.75■■□□□ 1.23
TPGS1-202ENST00000588278 HMGXB3Q12766 1538 aa22.74■■□□□ 1.23
TPGS1-202ENST00000588278 BCANQ96GW7 911 aa22.72■■□□□ 1.23
TPGS1-202ENST00000588278 KANK4Q5T7N3 995 aaPredicted RBP22.72■■□□□ 1.23
TPGS1-202ENST00000588278 TOP2BQ02880 1626 aa22.7■■□□□ 1.23
TPGS1-202ENST00000588278 ATP1B4Q9UN42 357 aaPredicted RBP22.64■■□□□ 1.21
TPGS1-202ENST00000588278 CUX1P39880 1505 aa22.63■■□□□ 1.21
TPGS1-202ENST00000588278 KIF27Q86VH2 1401 aa22.61■■□□□ 1.21
TPGS1-202ENST00000588278 P3H3Q8IVL6 736 aa22.59■■□□□ 1.21
TPGS1-202ENST00000588278 KCNH8Q96L42 1107 aa22.59■■□□□ 1.21
TPGS1-202ENST00000588278 PRXQ9BXM0 1461 aa22.56■■□□□ 1.2
TPGS1-202ENST00000588278 DNAJC5BQ9UF47 199 aa22.55■■□□□ 1.2
TPGS1-202ENST00000588278 ARAP1Q96P48 1450 aa22.52■■□□□ 1.2
TPGS1-202ENST00000588278 CC2D2AQ9P2K1 1620 aa22.52■■□□□ 1.2
TPGS1-202ENST00000588278 CFTRP13569 1480 aa22.52■■□□□ 1.2
TPGS1-202ENST00000588278 BIVM-ERCC5R4GMW8 1640 aa22.51■■□□□ 1.19
TPGS1-202ENST00000588278 CUX2O14529 1486 aa22.5■■□□□ 1.19
TPGS1-202ENST00000588278 ERICH3Q5RHP9 1530 aa22.42■■□□□ 1.18
TPGS1-202ENST00000588278 CADPSQ9ULU8 1353 aa22.41■■□□□ 1.18
TPGS1-202ENST00000588278 CLSPNQ9HAW4 1339 aa22.4■■□□□ 1.18
TPGS1-202ENST00000588278 FKBP8Q14318 412 aa22.4■■□□□ 1.18
TPGS1-202ENST00000588278 IGF1RP08069 1367 aa22.39■■□□□ 1.18
TPGS1-202ENST00000588278 ARHGAP35Q9NRY4 1499 aa22.36■■□□□ 1.17
TPGS1-202ENST00000588278 CARMIL1Q5VZK9 1371 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 164.3 ms