Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ZNF839-209ENST00000559185 2905 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
SCN2BO60939 FAM131A-211ENST00000639617 4450 ntTSL 5 BASIC11.95□□□□□ -0.5
SCN2BO60939 UBASH3A-202ENST00000319294 2504 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SCN2BO60939 ZNF548-201ENST00000336128 2115 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
SCN2BO60939 LIF-201ENST00000249075 3969 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCN2BO60939 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCN2BO60939 RNF13-203ENST00000392894 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCN2BO60939 MIR124-2HG-203ENST00000521441 2840 ntTSL 2 BASIC11.95□□□□□ -0.5
SCN2BO60939 AC092819.1-201ENST00000519981 1690 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SCN2BO60939 WASF2-202ENST00000618852 5676 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCN2BO60939 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCN2BO60939 PIFO-201ENST00000369737 746 ntTSL 2 BASIC11.95□□□□□ -0.5
SCN2BO60939 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
SCN2BO60939 CRYBB2-201ENST00000398215 886 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCN2BO60939 SERF2-205ENST00000403425 690 ntTSL 2 BASIC11.95□□□□□ -0.5
SCN2BO60939 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SCN2BO60939 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC11.95□□□□□ -0.5
SCN2BO60939 AL158847.1-201ENST00000431955 808 ntTSL 3 BASIC11.95□□□□□ -0.5
SCN2BO60939 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SCN2BO60939 DDX11L8-201ENST00000535849 366 ntBASIC11.95□□□□□ -0.5
SCN2BO60939 AC092862.1-201ENST00000541534 533 ntBASIC11.95□□□□□ -0.5
SCN2BO60939 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC11.95□□□□□ -0.5
SCN2BO60939 AL606495.2-201ENST00000605867 535 ntBASIC11.95□□□□□ -0.5
SCN2BO60939 AP001065.2-201ENST00000617205 644 ntBASIC11.95□□□□□ -0.5
SCN2BO60939 BX322534.1-201ENST00000635574 241 ntBASIC11.95□□□□□ -0.5
SCN2BO60939 AC215524.1-201ENST00000635696 241 ntBASIC11.95□□□□□ -0.5
SCN2BO60939 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
SCN2BO60939 SCML1-204ENST00000398080 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCN2BO60939 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCN2BO60939 AC073488.1-201ENST00000416620 1600 ntBASIC11.95□□□□□ -0.5
SCN2BO60939 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC11.95□□□□□ -0.5
SCN2BO60939 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC11.95□□□□□ -0.5
SCN2BO60939 SHPRH-201ENST00000275233 6649 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCN2BO60939 SPIN1-201ENST00000375859 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCN2BO60939 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
SCN2BO60939 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC11.95□□□□□ -0.5
SCN2BO60939 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SCN2BO60939 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCN2BO60939 NBN-203ENST00000409330 4523 ntTSL 5 BASIC11.95□□□□□ -0.5
SCN2BO60939 BHLHE40-201ENST00000256495 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCN2BO60939 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCN2BO60939 MYT1-205ENST00000622439 2140 ntTSL 5 BASIC11.95□□□□□ -0.5
SCN2BO60939 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCN2BO60939 LINC00242-201ENST00000437615 2418 ntTSL 2 BASIC11.95□□□□□ -0.5
SCN2BO60939 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SCN2BO60939 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
SCN2BO60939 PAX3-202ENST00000336840 2038 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SCN2BO60939 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC11.94□□□□□ -0.5
SCN2BO60939 HSPA4-201ENST00000304858 4825 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCN2BO60939 TMEM86A-201ENST00000280734 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCN2BO60939 FERMT1-204ENST00000536936 3229 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SCN2BO60939 PXMP4-203ENST00000409299 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCN2BO60939 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCN2BO60939 AC092117.2-201ENST00000623937 1659 ntBASIC11.94□□□□□ -0.5
SCN2BO60939 SPATS2L-205ENST00000409151 1979 ntTSL 2 BASIC11.94□□□□□ -0.5
SCN2BO60939 DCUN1D3-202ENST00000563934 1996 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SCN2BO60939 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCN2BO60939 CIITA-212ENST00000618207 2844 ntTSL 5 BASIC11.94□□□□□ -0.5
SCN2BO60939 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCN2BO60939 RPS3-209ENST00000527446 1306 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
SCN2BO60939 RNF4-201ENST00000314289 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCN2BO60939 MMP2-202ENST00000437642 2469 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SCN2BO60939 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCN2BO60939 FAM230B-205ENST00000424410 1856 ntTSL 5 BASIC11.94□□□□□ -0.5
SCN2BO60939 CCDC32-214ENST00000561011 1577 ntTSL 2 BASIC11.94□□□□□ -0.5
SCN2BO60939 BX005132.1-201ENST00000641403 1580 ntBASIC11.94□□□□□ -0.5
SCN2BO60939 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
SCN2BO60939 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCN2BO60939 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
SCN2BO60939 MRPL24-201ENST00000361531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCN2BO60939 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCN2BO60939 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SCN2BO60939 LINC01556-201ENST00000377186 466 ntTSL 2 BASIC11.94□□□□□ -0.5
SCN2BO60939 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
SCN2BO60939 RBMXP1-201ENST00000408004 1191 ntBASIC11.94□□□□□ -0.5
SCN2BO60939 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SCN2BO60939 AL078621.2-201ENST00000419351 698 ntBASIC11.94□□□□□ -0.5
SCN2BO60939 AP000346.2-202ENST00000425948 383 ntBASIC11.94□□□□□ -0.5
SCN2BO60939 GCSHP3-201ENST00000431120 391 ntBASIC11.94□□□□□ -0.5
SCN2BO60939 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC11.94□□□□□ -0.5
SCN2BO60939 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC11.94□□□□□ -0.5
SCN2BO60939 ZFR2-203ENST00000439086 870 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SCN2BO60939 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC11.94□□□□□ -0.5
SCN2BO60939 KRT18P26-201ENST00000454475 1281 ntBASIC11.94□□□□□ -0.5
SCN2BO60939 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC11.94□□□□□ -0.5
SCN2BO60939 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCN2BO60939 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC11.94□□□□□ -0.5
SCN2BO60939 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC11.94□□□□□ -0.5
SCN2BO60939 MIR4688-201ENST00000577966 83 ntBASIC11.94□□□□□ -0.5
SCN2BO60939 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
SCN2BO60939 MIR4472-1-201ENST00000584349 80 ntBASIC11.94□□□□□ -0.5
SCN2BO60939 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
SCN2BO60939 LINC00431-202ENST00000636375 159 ntBASIC11.94□□□□□ -0.5
SCN2BO60939 TRMT61B-201ENST00000306108 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCN2BO60939 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCN2BO60939 FCHSD1-201ENST00000435817 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCN2BO60939 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SCN2BO60939 PNP-201ENST00000361505 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SCN2BO60939 WDR78-201ENST00000371022 1520 ntTSL 5 BASIC11.94□□□□□ -0.5
SCN2BO60939 CPVL-201ENST00000265394 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms