RNA–Protein interactions for RNA: ENST00000249075.3

LIF-201, Transcript of LIF, interleukin 6 family cytokine, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIF, Length 3,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIF-201ENST00000249075 NISCHQ9Y2I1 1504 aa25.89■■□□□ 1.73
LIF-201ENST00000249075 DCAF8L2P0C7V8 631 aa23.14■■□□□ 1.29
LIF-201ENST00000249075 SHROOM4Q9ULL8 1493 aa22.73■■□□□ 1.23
LIF-201ENST00000249075 SUPT5HO00267 1087 aaKnown RBP22.29■■□□□ 1.16
LIF-201ENST00000249075 CCDC180Q9P1Z9 1646 aa21.89■■□□□ 1.09
LIF-201ENST00000249075 ZCCHC6Q5VYS8 1495 aaKnown RBP21.67■■□□□ 1.06
LIF-201ENST00000249075 ABCC9O60706 1549 aa21.54■■□□□ 1.04
LIF-201ENST00000249075 SCRIBQ14160 1630 aa21.02■□□□□ 0.96
LIF-201ENST00000249075 DCAF1Q9Y4B6 1507 aa20.9■□□□□ 0.94
LIF-201ENST00000249075 EHMT2Q96KQ7 1210 aa20.88■□□□□ 0.93
LIF-201ENST00000249075 CHIC1Q5VXU3 224 aa20.86■□□□□ 0.93
LIF-201ENST00000249075 PABPN1Q86U42 306 aaKnown RBP eCLIP20.78■□□□□ 0.92
LIF-201ENST00000249075 FAM9AQ8IZU1 332 aaPredicted RBP20.77■□□□□ 0.92
LIF-201ENST00000249075 TRIM41Q8WV44 630 aa20.67■□□□□ 0.9
LIF-201ENST00000249075 NACADO15069 1562 aa20.64■□□□□ 0.89
LIF-201ENST00000249075 RB1CC1Q8TDY2 1594 aa20.56■□□□□ 0.88
LIF-201ENST00000249075 LOC105371045A0A1W2PR82 267 aa20.47■□□□□ 0.87
LIF-201ENST00000249075 RSF1Q96T23 1441 aaPredicted RBP20.44■□□□□ 0.86
LIF-201ENST00000249075 MYO15BQ96JP2 1530 aa20.4■□□□□ 0.86
LIF-201ENST00000249075 CECR2Q9BXF3 1484 aa20.37■□□□□ 0.85
LIF-201ENST00000249075 PCGF6Q9BYE7 350 aa20.26■□□□□ 0.83
LIF-201ENST00000249075 MROH2BQ7Z745 1585 aa20.16■□□□□ 0.82
LIF-201ENST00000249075 TTBK1Q5TCY1 1321 aaPredicted RBP20.06■□□□□ 0.8
LIF-201ENST00000249075 BAZ1AQ9NRL2 1556 aaPredicted RBP20.02■□□□□ 0.8
LIF-201ENST00000249075 RANGAP1P46060 587 aaPredicted RBP20.01■□□□□ 0.79
LIF-201ENST00000249075 UBTFP17480 764 aaKnown RBP19.99■□□□□ 0.79
LIF-201ENST00000249075 WIZO95785 1651 aa19.98■□□□□ 0.79
LIF-201ENST00000249075 PPARGC1BQ86YN6 1023 aaKnown RBP19.98■□□□□ 0.79
LIF-201ENST00000249075 SMARCA4P51532 1647 aa19.75■□□□□ 0.75
LIF-201ENST00000249075 TRIM26Q12899 539 aaPredicted RBP19.72■□□□□ 0.75
LIF-201ENST00000249075 CCDC88BA6NC98 1476 aa19.71■□□□□ 0.75
LIF-201ENST00000249075 BAZ1BQ9UIG0 1483 aaKnown RBP19.71■□□□□ 0.74
LIF-201ENST00000249075 APLP2Q06481 763 aa19.69■□□□□ 0.74
LIF-201ENST00000249075 TOP2AP11388 1531 aaKnown RBP19.65■□□□□ 0.74
LIF-201ENST00000249075 UNC13AQ9UPW8 1703 aa19.62■□□□□ 0.73
LIF-201ENST00000249075 CSRNP3Q8WYN3 585 aa19.6■□□□□ 0.73
LIF-201ENST00000249075 ABCC8Q09428 1581 aa19.59■□□□□ 0.73
LIF-201ENST00000249075 BICRAQ9NZM4 1560 aa19.56■□□□□ 0.72
LIF-201ENST00000249075 HRCP23327 699 aa19.54■□□□□ 0.72
LIF-201ENST00000249075 ATAD2BQ9ULI0 1458 aa19.52■□□□□ 0.71
LIF-201ENST00000249075 WRNQ14191 1432 aaPredicted RBP eCLIP19.49■□□□□ 0.71
LIF-201ENST00000249075 SMARCA2P51531 1590 aa19.47■□□□□ 0.71
LIF-201ENST00000249075 ATP1B4Q9UN42 357 aaPredicted RBP19.43■□□□□ 0.7
LIF-201ENST00000249075 SOGA1O94964 1423 aa19.41■□□□□ 0.7
LIF-201ENST00000249075 CCER1Q8TC90 406 aaPredicted RBP19.39■□□□□ 0.69
LIF-201ENST00000249075 EIF4G1Q04637 1599 aaKnown RBP19.27■□□□□ 0.67
LIF-201ENST00000249075 HNRNPUL2Q1KMD3 747 aaKnown RBP19.24■□□□□ 0.67
LIF-201ENST00000249075 ZEB1P37275 1124 aaPredicted RBP19.24■□□□□ 0.67
LIF-201ENST00000249075 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.24■□□□□ 0.67
LIF-201ENST00000249075 RUSC2Q8N2Y8 1516 aa19.22■□□□□ 0.67
LIF-201ENST00000249075 EEA1Q15075 1411 aa19.22■□□□□ 0.67
LIF-201ENST00000249075 CEP162Q5TB80 1403 aa19.21■□□□□ 0.67
LIF-201ENST00000249075 GOLGA3Q08378 1498 aa19.16■□□□□ 0.66
LIF-201ENST00000249075 ITGAEP38570 1179 aa19.12■□□□□ 0.65
LIF-201ENST00000249075 NCAPD3P42695 1498 aa19.12■□□□□ 0.65
LIF-201ENST00000249075 TNIKQ9UKE5 1360 aa19.12■□□□□ 0.65
LIF-201ENST00000249075 P3H3Q8IVL6 736 aa19.11■□□□□ 0.65
LIF-201ENST00000249075 CLIP1P30622 1438 aa19.08■□□□□ 0.65
LIF-201ENST00000249075 CEP164Q9UPV0 1460 aa19.07■□□□□ 0.64
LIF-201ENST00000249075 PEG3Q9GZU2 1588 aa19.04■□□□□ 0.64
LIF-201ENST00000249075 KIF27Q86VH2 1401 aa19.02■□□□□ 0.64
LIF-201ENST00000249075 CADPSQ9ULU8 1353 aa19.02■□□□□ 0.64
LIF-201ENST00000249075 SYNJ1O43426 1573 aa19.01■□□□□ 0.63
LIF-201ENST00000249075 CUX2O14529 1486 aa18.96■□□□□ 0.63
LIF-201ENST00000249075 HMGXB3Q12766 1538 aa18.95■□□□□ 0.62
LIF-201ENST00000249075 CC2D2AQ9P2K1 1620 aa18.94■□□□□ 0.62
LIF-201ENST00000249075 RAPGEF2Q9Y4G8 1499 aa18.91■□□□□ 0.62
LIF-201ENST00000249075 CFTRP13569 1480 aa18.86■□□□□ 0.61
LIF-201ENST00000249075 FBLN2P98095 1184 aa18.85■□□□□ 0.61
LIF-201ENST00000249075 FANCD2Q9BXW9 1451 aa18.83■□□□□ 0.61
LIF-201ENST00000249075 FAM50AQ14320 339 aaKnown RBP18.83■□□□□ 0.61
LIF-201ENST00000249075 DNAJC5BQ9UF47 199 aa18.83■□□□□ 0.6
LIF-201ENST00000249075 ARID3CA6NKF2 412 aa18.81■□□□□ 0.6
LIF-201ENST00000249075 CARMIL1Q5VZK9 1371 aa18.8■□□□□ 0.6
LIF-201ENST00000249075 NESP48681 1621 aa18.8■□□□□ 0.6
LIF-201ENST00000249075 CUX1P39880 1505 aa18.77■□□□□ 0.6
LIF-201ENST00000249075 TOP2BQ02880 1626 aa18.75■□□□□ 0.59
LIF-201ENST00000249075 TDRD9Q8NDG6 1382 aaKnown RBP18.74■□□□□ 0.59
LIF-201ENST00000249075 FGD5Q6ZNL6 1462 aa18.74■□□□□ 0.59
LIF-201ENST00000249075 VPS8Q8N3P4 1428 aa18.73■□□□□ 0.59
LIF-201ENST00000249075 PDS5BQ9NTI5 1447 aa18.72■□□□□ 0.59
LIF-201ENST00000249075 RAD54L2Q9Y4B4 1467 aa18.68■□□□□ 0.58
LIF-201ENST00000249075 KANK4Q5T7N3 995 aaPredicted RBP18.64■□□□□ 0.57
LIF-201ENST00000249075 IGF1RP08069 1367 aa18.64■□□□□ 0.57
LIF-201ENST00000249075 KIF21BO75037 1637 aa18.63■□□□□ 0.57
LIF-201ENST00000249075 ERCC6Q03468 1493 aa18.62■□□□□ 0.57
LIF-201ENST00000249075 PRXQ9BXM0 1461 aa18.54■□□□□ 0.56
LIF-201ENST00000249075 CHMP7Q8WUX9 453 aaPredicted RBP18.53■□□□□ 0.56
LIF-201ENST00000249075 BIVM-ERCC5R4GMW8 1640 aa18.53■□□□□ 0.56
LIF-201ENST00000249075 TOPBP1Q92547 1522 aa18.51■□□□□ 0.55
LIF-201ENST00000249075 DIEXFQ68CQ4 756 aaKnown RBP18.5■□□□□ 0.55
LIF-201ENST00000249075 NEUROD1Q13562 356 aa18.49■□□□□ 0.55
LIF-201ENST00000249075 POLA1P09884 1462 aaPredicted RBP18.49■□□□□ 0.55
LIF-201ENST00000249075 MTUS2Q5JR59 1369 aa18.49■□□□□ 0.55
LIF-201ENST00000249075 YTHDC1Q96MU7 727 aaKnown RBP18.48■□□□□ 0.55
LIF-201ENST00000249075 FHOD3Q2V2M9 1422 aa18.47■□□□□ 0.55
LIF-201ENST00000249075 ERICH3Q5RHP9 1530 aa18.46■□□□□ 0.55
LIF-201ENST00000249075 ARAP1Q96P48 1450 aa18.44■□□□□ 0.54
LIF-201ENST00000249075 FHAD1B1AJZ9 1412 aa18.42■□□□□ 0.54
LIF-201ENST00000249075 DNMBPQ6XZF7 1577 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms