RNA–Protein interactions for RNA: ENST00000246672.3

NR1D1-201, Transcript of nuclear receptor subfamily 1 group D member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1-201ENST00000246672 NISCHQ9Y2I1 1504 aa23.99■■□□□ 1.43
NR1D1-201ENST00000246672 HRCP23327 699 aa21.14■□□□□ 0.97
NR1D1-201ENST00000246672 SHROOM4Q9ULL8 1493 aa21.11■□□□□ 0.97
NR1D1-201ENST00000246672 SUPT5HO00267 1087 aaKnown RBP20.96■□□□□ 0.95
NR1D1-201ENST00000246672 PPARGC1BQ86YN6 1023 aaKnown RBP20.74■□□□□ 0.91
NR1D1-201ENST00000246672 PCGF6Q9BYE7 350 aa20.7■□□□□ 0.9
NR1D1-201ENST00000246672 MYO15BQ96JP2 1530 aa20.66■□□□□ 0.9
NR1D1-201ENST00000246672 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
NR1D1-201ENST00000246672 PELP1Q8IZL8 1130 aaKnown RBP20.4■□□□□ 0.86
NR1D1-201ENST00000246672 ZCCHC6Q5VYS8 1495 aaKnown RBP20.38■□□□□ 0.85
NR1D1-201ENST00000246672 DCAF1Q9Y4B6 1507 aa20.14■□□□□ 0.81
NR1D1-201ENST00000246672 LOC105371045A0A1W2PR82 267 aa20.08■□□□□ 0.8
NR1D1-201ENST00000246672 SCAF1Q9H7N4 1312 aaKnown RBP20.04■□□□□ 0.8
NR1D1-201ENST00000246672 CCDC180Q9P1Z9 1646 aa20.01■□□□□ 0.79
NR1D1-201ENST00000246672 DCAF8L2P0C7V8 631 aa20■□□□□ 0.79
NR1D1-201ENST00000246672 TRIM26Q12899 539 aaPredicted RBP19.99■□□□□ 0.79
NR1D1-201ENST00000246672 ZEB1P37275 1124 aaPredicted RBP19.82■□□□□ 0.76
NR1D1-201ENST00000246672 MYT1Q01538 1121 aa19.6■□□□□ 0.73
NR1D1-201ENST00000246672 ACIN1Q9UKV3 1341 aaKnown RBP19.52■□□□□ 0.72
NR1D1-201ENST00000246672 NEUROD1Q13562 356 aa19.49■□□□□ 0.71
NR1D1-201ENST00000246672 TRIM41Q8WV44 630 aa19.39■□□□□ 0.69
NR1D1-201ENST00000246672 FAM9AQ8IZU1 332 aaPredicted RBP19.38■□□□□ 0.69
NR1D1-201ENST00000246672 GTF3C3Q9Y5Q9 886 aa19.37■□□□□ 0.69
NR1D1-201ENST00000246672 ABCC9O60706 1549 aa19.34■□□□□ 0.69
NR1D1-201ENST00000246672 EHMT2Q96KQ7 1210 aa19.31■□□□□ 0.68
NR1D1-201ENST00000246672 RSF1Q96T23 1441 aaPredicted RBP19.25■□□□□ 0.67
NR1D1-201ENST00000246672 CENPBP07199 599 aaPredicted RBP19.23■□□□□ 0.67
NR1D1-201ENST00000246672 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.17■□□□□ 0.66
NR1D1-201ENST00000246672 RB1CC1Q8TDY2 1594 aa19.17■□□□□ 0.66
NR1D1-201ENST00000246672 DIEXFQ68CQ4 756 aaKnown RBP19.16■□□□□ 0.66
NR1D1-201ENST00000246672 CCER1Q8TC90 406 aaPredicted RBP19.11■□□□□ 0.65
NR1D1-201ENST00000246672 SCRIBQ14160 1630 aa19.06■□□□□ 0.64
NR1D1-201ENST00000246672 YTHDC1Q96MU7 727 aaKnown RBP18.87■□□□□ 0.61
NR1D1-201ENST00000246672 TTBK1Q5TCY1 1321 aaPredicted RBP18.81■□□□□ 0.6
NR1D1-201ENST00000246672 CECR2Q9BXF3 1484 aa18.79■□□□□ 0.6
NR1D1-201ENST00000246672 ZNF316A6NFI3 1004 aaPredicted RBP18.77■□□□□ 0.6
NR1D1-201ENST00000246672 MROH2BQ7Z745 1585 aa18.75■□□□□ 0.59
NR1D1-201ENST00000246672 WIZO95785 1651 aa18.69■□□□□ 0.58
NR1D1-201ENST00000246672 MIER1Q8N108 512 aa18.69■□□□□ 0.58
NR1D1-201ENST00000246672 WRNQ14191 1432 aaPredicted RBP eCLIP18.65■□□□□ 0.58
NR1D1-201ENST00000246672 CEP162Q5TB80 1403 aa18.59■□□□□ 0.57
NR1D1-201ENST00000246672 EIF4G1Q04637 1599 aaKnown RBP18.59■□□□□ 0.57
NR1D1-201ENST00000246672 BAZ1AQ9NRL2 1556 aaPredicted RBP18.53■□□□□ 0.56
NR1D1-201ENST00000246672 CCDC88BA6NC98 1476 aa18.52■□□□□ 0.56
NR1D1-201ENST00000246672 ABCC8Q09428 1581 aa18.52■□□□□ 0.56
NR1D1-201ENST00000246672 TNIKQ9UKE5 1360 aa18.48■□□□□ 0.55
NR1D1-201ENST00000246672 SOGA1O94964 1423 aa18.46■□□□□ 0.55
NR1D1-201ENST00000246672 SUPT16HQ9Y5B9 1047 aaKnown RBP18.42■□□□□ 0.54
NR1D1-201ENST00000246672 UBTFP17480 764 aaKnown RBP18.42■□□□□ 0.54
NR1D1-201ENST00000246672 ANP32EQ9BTT0 268 aa18.42■□□□□ 0.54
NR1D1-201ENST00000246672 BCL11AQ9H165 835 aa18.42■□□□□ 0.54
NR1D1-201ENST00000246672 NACADO15069 1562 aa18.41■□□□□ 0.54
NR1D1-201ENST00000246672 HNRNPUL2Q1KMD3 747 aaKnown RBP18.39■□□□□ 0.53
NR1D1-201ENST00000246672 CSRNP3Q8WYN3 585 aa18.37■□□□□ 0.53
NR1D1-201ENST00000246672 TSHZ2Q9NRE2 1034 aa18.37■□□□□ 0.53
NR1D1-201ENST00000246672 RUSC2Q8N2Y8 1516 aa18.36■□□□□ 0.53
NR1D1-201ENST00000246672 CLSPNQ9HAW4 1339 aa18.32■□□□□ 0.52
NR1D1-201ENST00000246672 TOP2AP11388 1531 aaKnown RBP18.31■□□□□ 0.52
NR1D1-201ENST00000246672 EEA1Q15075 1411 aa18.29■□□□□ 0.52
NR1D1-201ENST00000246672 SMARCA2P51531 1590 aa18.27■□□□□ 0.51
NR1D1-201ENST00000246672 GOLGA3Q08378 1498 aa18.27■□□□□ 0.51
NR1D1-201ENST00000246672 SMARCA4P51532 1647 aa18.15■□□□□ 0.5
NR1D1-201ENST00000246672 CLIP1P30622 1438 aa18.13■□□□□ 0.49
NR1D1-201ENST00000246672 APLP2Q06481 763 aa18.09■□□□□ 0.49
NR1D1-201ENST00000246672 VPS8Q8N3P4 1428 aa18.09■□□□□ 0.49
NR1D1-201ENST00000246672 CEP164Q9UPV0 1460 aa18.09■□□□□ 0.49
NR1D1-201ENST00000246672 RANGAP1P46060 587 aaPredicted RBP18.04■□□□□ 0.48
NR1D1-201ENST00000246672 KIF21BO75037 1637 aa18.04■□□□□ 0.48
NR1D1-201ENST00000246672 BCANQ96GW7 911 aa18.03■□□□□ 0.48
NR1D1-201ENST00000246672 DHX57Q6P158 1386 aaKnown RBP18.01■□□□□ 0.47
NR1D1-201ENST00000246672 SYNJ1O43426 1573 aa17.97■□□□□ 0.47
NR1D1-201ENST00000246672 KCNH8Q96L42 1107 aa17.96■□□□□ 0.47
NR1D1-201ENST00000246672 RAPGEF2Q9Y4G8 1499 aa17.96■□□□□ 0.46
NR1D1-201ENST00000246672 FKBP8Q14318 412 aa17.93■□□□□ 0.46
NR1D1-201ENST00000246672 RBM19Q9Y4C8 960 aaKnown RBP17.93■□□□□ 0.46
NR1D1-201ENST00000246672 BAZ1BQ9UIG0 1483 aaKnown RBP17.92■□□□□ 0.46
NR1D1-201ENST00000246672 UNC13AQ9UPW8 1703 aa17.84■□□□□ 0.45
NR1D1-201ENST00000246672 KANK4Q5T7N3 995 aaPredicted RBP17.84■□□□□ 0.45
NR1D1-201ENST00000246672 MSH5O43196 834 aa17.79■□□□□ 0.44
NR1D1-201ENST00000246672 ITGAEP38570 1179 aa17.77■□□□□ 0.44
NR1D1-201ENST00000246672 ARAP1Q96P48 1450 aa17.76■□□□□ 0.43
NR1D1-201ENST00000246672 NEFLP07196 543 aa17.74■□□□□ 0.43
NR1D1-201ENST00000246672 RRBP1Q9P2E9 1410 aaKnown RBP17.73■□□□□ 0.43
NR1D1-201ENST00000246672 PABPN1Q86U42 306 aaKnown RBP eCLIP17.72■□□□□ 0.43
NR1D1-201ENST00000246672 CUX2O14529 1486 aa17.7■□□□□ 0.42
NR1D1-201ENST00000246672 PEG3Q9GZU2 1588 aa17.69■□□□□ 0.42
NR1D1-201ENST00000246672 CCNB3Q8WWL7 1395 aa17.67■□□□□ 0.42
NR1D1-201ENST00000246672 DDX10Q13206 875 aaKnown RBP17.67■□□□□ 0.42
NR1D1-201ENST00000246672 TRIM52Q96A61 297 aa17.64■□□□□ 0.41
NR1D1-201ENST00000246672 PRXQ9BXM0 1461 aa17.64■□□□□ 0.41
NR1D1-201ENST00000246672 ERICH3Q5RHP9 1530 aa17.64■□□□□ 0.41
NR1D1-201ENST00000246672 TOP2BQ02880 1626 aa17.64■□□□□ 0.41
NR1D1-201ENST00000246672 PRKCSHP14314 528 aaPredicted RBP17.63■□□□□ 0.41
NR1D1-201ENST00000246672 RAB3GAP2Q9H2M9 1393 aa17.62■□□□□ 0.41
NR1D1-201ENST00000246672 MAPKBP1O60336 1514 aa17.62■□□□□ 0.41
NR1D1-201ENST00000246672 FANCIQ9NVI1 1328 aa17.59■□□□□ 0.41
NR1D1-201ENST00000246672 BICRAQ9NZM4 1560 aa17.58■□□□□ 0.41
NR1D1-201ENST00000246672 ERICH6Q7L0X2 663 aa17.57■□□□□ 0.4
NR1D1-201ENST00000246672 ATAD2BQ9ULI0 1458 aa17.57■□□□□ 0.4
NR1D1-201ENST00000246672 WDR97A6NE52 1622 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms