RNA–Protein interactions for RNA: ENST00000536936.1

FERMT1-204, Transcript of fermitin family member 1, humanhuman

TSL 1 (best) BASIC

Gene FERMT1, Length 3,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT1-204ENST00000536936 NISCHQ9Y2I1 1504 aa26.72■■□□□ 1.87
FERMT1-204ENST00000536936 DCAF8L2P0C7V8 631 aa23.18■■□□□ 1.3
FERMT1-204ENST00000536936 SHROOM4Q9ULL8 1493 aa23.12■■□□□ 1.29
FERMT1-204ENST00000536936 CCDC180Q9P1Z9 1646 aa22.71■■□□□ 1.23
FERMT1-204ENST00000536936 ZCCHC6Q5VYS8 1495 aaKnown RBP22.44■■□□□ 1.18
FERMT1-204ENST00000536936 SUPT5HO00267 1087 aaKnown RBP22.42■■□□□ 1.18
FERMT1-204ENST00000536936 ABCC9O60706 1549 aa22.14■■□□□ 1.13
FERMT1-204ENST00000536936 SCRIBQ14160 1630 aa21.7■■□□□ 1.07
FERMT1-204ENST00000536936 DCAF1Q9Y4B6 1507 aa21.6■■□□□ 1.05
FERMT1-204ENST00000536936 PABPN1Q86U42 306 aaKnown RBP eCLIP21.24■□□□□ 0.99
FERMT1-204ENST00000536936 NACADO15069 1562 aa21.23■□□□□ 0.99
FERMT1-204ENST00000536936 CHIC1Q5VXU3 224 aa21.18■□□□□ 0.98
FERMT1-204ENST00000536936 RB1CC1Q8TDY2 1594 aa21.11■□□□□ 0.97
FERMT1-204ENST00000536936 CECR2Q9BXF3 1484 aa21.11■□□□□ 0.97
FERMT1-204ENST00000536936 MYO15BQ96JP2 1530 aa21.09■□□□□ 0.97
FERMT1-204ENST00000536936 RSF1Q96T23 1441 aaPredicted RBP21.05■□□□□ 0.96
FERMT1-204ENST00000536936 EHMT2Q96KQ7 1210 aa20.99■□□□□ 0.95
FERMT1-204ENST00000536936 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.93
FERMT1-204ENST00000536936 FAM9AQ8IZU1 332 aaPredicted RBP20.87■□□□□ 0.93
FERMT1-204ENST00000536936 LOC105371045A0A1W2PR82 267 aa20.81■□□□□ 0.92
FERMT1-204ENST00000536936 WIZO95785 1651 aa20.77■□□□□ 0.92
FERMT1-204ENST00000536936 UNC13AQ9UPW8 1703 aa20.76■□□□□ 0.91
FERMT1-204ENST00000536936 TRIM41Q8WV44 630 aa20.71■□□□□ 0.91
FERMT1-204ENST00000536936 BAZ1AQ9NRL2 1556 aaPredicted RBP20.55■□□□□ 0.88
FERMT1-204ENST00000536936 BICRAQ9NZM4 1560 aa20.53■□□□□ 0.88
FERMT1-204ENST00000536936 SMARCA4P51532 1647 aa20.46■□□□□ 0.87
FERMT1-204ENST00000536936 CCDC88BA6NC98 1476 aa20.31■□□□□ 0.84
FERMT1-204ENST00000536936 PCGF6Q9BYE7 350 aa20.28■□□□□ 0.84
FERMT1-204ENST00000536936 ABCC8Q09428 1581 aa20.26■□□□□ 0.83
FERMT1-204ENST00000536936 TOP2AP11388 1531 aaKnown RBP20.26■□□□□ 0.83
FERMT1-204ENST00000536936 PPARGC1BQ86YN6 1023 aaKnown RBP20.19■□□□□ 0.82
FERMT1-204ENST00000536936 SMARCA2P51531 1590 aa20.18■□□□□ 0.82
FERMT1-204ENST00000536936 BAZ1BQ9UIG0 1483 aaKnown RBP20.14■□□□□ 0.81
FERMT1-204ENST00000536936 ATAD2BQ9ULI0 1458 aa20.12■□□□□ 0.81
FERMT1-204ENST00000536936 TTBK1Q5TCY1 1321 aaPredicted RBP20.11■□□□□ 0.81
FERMT1-204ENST00000536936 RANGAP1P46060 587 aaPredicted RBP20.05■□□□□ 0.8
FERMT1-204ENST00000536936 EIF4G1Q04637 1599 aaKnown RBP19.97■□□□□ 0.79
FERMT1-204ENST00000536936 SOGA1O94964 1423 aa19.95■□□□□ 0.78
FERMT1-204ENST00000536936 UBTFP17480 764 aaKnown RBP19.93■□□□□ 0.78
FERMT1-204ENST00000536936 RUSC2Q8N2Y8 1516 aa19.91■□□□□ 0.78
FERMT1-204ENST00000536936 WRNQ14191 1432 aaPredicted RBP eCLIP19.86■□□□□ 0.77
FERMT1-204ENST00000536936 PEG3Q9GZU2 1588 aa19.84■□□□□ 0.77
FERMT1-204ENST00000536936 HRCP23327 699 aa19.81■□□□□ 0.76
FERMT1-204ENST00000536936 CSRNP3Q8WYN3 585 aa19.77■□□□□ 0.76
FERMT1-204ENST00000536936 DNAJC5BQ9UF47 199 aa19.74■□□□□ 0.75
FERMT1-204ENST00000536936 SYNJ1O43426 1573 aa19.73■□□□□ 0.75
FERMT1-204ENST00000536936 NCAPD3P42695 1498 aa19.7■□□□□ 0.74
FERMT1-204ENST00000536936 TRIM26Q12899 539 aaPredicted RBP19.7■□□□□ 0.74
FERMT1-204ENST00000536936 CC2D2AQ9P2K1 1620 aa19.68■□□□□ 0.74
FERMT1-204ENST00000536936 HMGXB3Q12766 1538 aa19.58■□□□□ 0.73
FERMT1-204ENST00000536936 CEP162Q5TB80 1403 aa19.55■□□□□ 0.72
FERMT1-204ENST00000536936 NESP48681 1621 aa19.51■□□□□ 0.71
FERMT1-204ENST00000536936 CADPSQ9ULU8 1353 aa19.45■□□□□ 0.7
FERMT1-204ENST00000536936 CUX1P39880 1505 aa19.45■□□□□ 0.7
FERMT1-204ENST00000536936 CFTRP13569 1480 aa19.45■□□□□ 0.7
FERMT1-204ENST00000536936 GOLGA3Q08378 1498 aa19.43■□□□□ 0.7
FERMT1-204ENST00000536936 RAPGEF2Q9Y4G8 1499 aa19.43■□□□□ 0.7
FERMT1-204ENST00000536936 EEA1Q15075 1411 aa19.4■□□□□ 0.7
FERMT1-204ENST00000536936 TNIKQ9UKE5 1360 aa19.4■□□□□ 0.7
FERMT1-204ENST00000536936 TOP2BQ02880 1626 aa19.38■□□□□ 0.69
FERMT1-204ENST00000536936 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.35■□□□□ 0.69
FERMT1-204ENST00000536936 CEP164Q9UPV0 1460 aa19.35■□□□□ 0.69
FERMT1-204ENST00000536936 CLIP1P30622 1438 aa19.32■□□□□ 0.68
FERMT1-204ENST00000536936 CUX2O14529 1486 aa19.32■□□□□ 0.68
FERMT1-204ENST00000536936 FANCD2Q9BXW9 1451 aa19.31■□□□□ 0.68
FERMT1-204ENST00000536936 APLP2Q06481 763 aa19.3■□□□□ 0.68
FERMT1-204ENST00000536936 P3H3Q8IVL6 736 aa19.3■□□□□ 0.68
FERMT1-204ENST00000536936 ATP1B4Q9UN42 357 aaPredicted RBP19.28■□□□□ 0.68
FERMT1-204ENST00000536936 KIF27Q86VH2 1401 aa19.26■□□□□ 0.67
FERMT1-204ENST00000536936 HNRNPUL2Q1KMD3 747 aaKnown RBP19.26■□□□□ 0.67
FERMT1-204ENST00000536936 FGD5Q6ZNL6 1462 aa19.25■□□□□ 0.67
FERMT1-204ENST00000536936 RAD54L2Q9Y4B4 1467 aa19.25■□□□□ 0.67
FERMT1-204ENST00000536936 BIVM-ERCC5R4GMW8 1640 aa19.24■□□□□ 0.67
FERMT1-204ENST00000536936 CCER1Q8TC90 406 aaPredicted RBP19.2■□□□□ 0.66
FERMT1-204ENST00000536936 KIF21BO75037 1637 aa19.16■□□□□ 0.66
FERMT1-204ENST00000536936 TDRD9Q8NDG6 1382 aaKnown RBP19.14■□□□□ 0.65
FERMT1-204ENST00000536936 IGF1RP08069 1367 aa19.1■□□□□ 0.65
FERMT1-204ENST00000536936 ITGAEP38570 1179 aa19.1■□□□□ 0.65
FERMT1-204ENST00000536936 CARMIL1Q5VZK9 1371 aa19.09■□□□□ 0.65
FERMT1-204ENST00000536936 PRXQ9BXM0 1461 aa19.08■□□□□ 0.64
FERMT1-204ENST00000536936 TOPBP1Q92547 1522 aa19.07■□□□□ 0.64
FERMT1-204ENST00000536936 POLA1P09884 1462 aaPredicted RBP19.06■□□□□ 0.64
FERMT1-204ENST00000536936 PRDM2Q13029 1718 aa19.06■□□□□ 0.64
FERMT1-204ENST00000536936 KANK4Q5T7N3 995 aaPredicted RBP19.04■□□□□ 0.64
FERMT1-204ENST00000536936 VPS8Q8N3P4 1428 aa19.04■□□□□ 0.64
FERMT1-204ENST00000536936 URB2Q14146 1524 aaKnown RBP19.02■□□□□ 0.64
FERMT1-204ENST00000536936 PDS5BQ9NTI5 1447 aa19■□□□□ 0.63
FERMT1-204ENST00000536936 ARID3CA6NKF2 412 aa18.99■□□□□ 0.63
FERMT1-204ENST00000536936 ARAP1Q96P48 1450 aa18.98■□□□□ 0.63
FERMT1-204ENST00000536936 DNMBPQ6XZF7 1577 aa18.97■□□□□ 0.63
FERMT1-204ENST00000536936 KIF21AQ7Z4S6 1674 aa18.97■□□□□ 0.63
FERMT1-204ENST00000536936 LAMC3Q9Y6N6 1575 aa18.93■□□□□ 0.62
FERMT1-204ENST00000536936 ERICH3Q5RHP9 1530 aa18.93■□□□□ 0.62
FERMT1-204ENST00000536936 FBLN2P98095 1184 aa18.9■□□□□ 0.62
FERMT1-204ENST00000536936 ARHGAP35Q9NRY4 1499 aa18.89■□□□□ 0.62
FERMT1-204ENST00000536936 ZEB1P37275 1124 aaPredicted RBP18.88■□□□□ 0.61
FERMT1-204ENST00000536936 AQRO60306 1485 aaKnown RBP eCLIP18.88■□□□□ 0.61
FERMT1-204ENST00000536936 ERCC6Q03468 1493 aa18.87■□□□□ 0.61
FERMT1-204ENST00000536936 FHOD3Q2V2M9 1422 aa18.87■□□□□ 0.61
FERMT1-204ENST00000536936 ABCA10Q8WWZ4 1543 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms