RNA–Protein interactions for RNA: ENST00000434101.6

TRAPPC4-202, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-202ENST00000434101 NISCHQ9Y2I1 1504 aa32.33■■■□□ 2.77
TRAPPC4-202ENST00000434101 CCDC180Q9P1Z9 1646 aa28.88■■■□□ 2.21
TRAPPC4-202ENST00000434101 ABCC9O60706 1549 aa28.34■■■□□ 2.13
TRAPPC4-202ENST00000434101 RB1CC1Q8TDY2 1594 aa27.25■■□□□ 1.95
TRAPPC4-202ENST00000434101 NACADO15069 1562 aa27.18■■□□□ 1.94
TRAPPC4-202ENST00000434101 DCAF8L2P0C7V8 631 aa27.06■■□□□ 1.92
TRAPPC4-202ENST00000434101 MYO15BQ96JP2 1530 aa26.95■■□□□ 1.91
TRAPPC4-202ENST00000434101 ZCCHC6Q5VYS8 1495 aaKnown RBP26.89■■□□□ 1.9
TRAPPC4-202ENST00000434101 DCAF1Q9Y4B6 1507 aa26.76■■□□□ 1.87
TRAPPC4-202ENST00000434101 UNC13AQ9UPW8 1703 aa26.65■■□□□ 1.86
TRAPPC4-202ENST00000434101 PABPN1Q86U42 306 aaKnown RBP eCLIP26.43■■□□□ 1.82
TRAPPC4-202ENST00000434101 BICRAQ9NZM4 1560 aa26.37■■□□□ 1.81
TRAPPC4-202ENST00000434101 SCRIBQ14160 1630 aa26.28■■□□□ 1.8
TRAPPC4-202ENST00000434101 SHROOM4Q9ULL8 1493 aa26.16■■□□□ 1.78
TRAPPC4-202ENST00000434101 DNAJC5BQ9UF47 199 aa26.11■■□□□ 1.77
TRAPPC4-202ENST00000434101 EIF4G1Q04637 1599 aaKnown RBP25.72■■□□□ 1.71
TRAPPC4-202ENST00000434101 CC2D2AQ9P2K1 1620 aa25.66■■□□□ 1.7
TRAPPC4-202ENST00000434101 CECR2Q9BXF3 1484 aa25.51■■□□□ 1.67
TRAPPC4-202ENST00000434101 SMARCA4P51532 1647 aa25.14■■□□□ 1.61
TRAPPC4-202ENST00000434101 BAZ1AQ9NRL2 1556 aaPredicted RBP25.1■■□□□ 1.61
TRAPPC4-202ENST00000434101 NCAPD3P42695 1498 aa25.04■■□□□ 1.6
TRAPPC4-202ENST00000434101 SMARCA2P51531 1590 aa25.03■■□□□ 1.6
TRAPPC4-202ENST00000434101 ATAD2BQ9ULI0 1458 aa25.02■■□□□ 1.6
TRAPPC4-202ENST00000434101 HMGXB3Q12766 1538 aa24.93■■□□□ 1.58
TRAPPC4-202ENST00000434101 PEG3Q9GZU2 1588 aa24.9■■□□□ 1.58
TRAPPC4-202ENST00000434101 MROH2BQ7Z745 1585 aa24.88■■□□□ 1.57
TRAPPC4-202ENST00000434101 BAZ1BQ9UIG0 1483 aaKnown RBP24.83■■□□□ 1.56
TRAPPC4-202ENST00000434101 WIZO95785 1651 aa24.64■■□□□ 1.53
TRAPPC4-202ENST00000434101 RSF1Q96T23 1441 aaPredicted RBP24.53■■□□□ 1.52
TRAPPC4-202ENST00000434101 ERCC6Q03468 1493 aa24.49■■□□□ 1.51
TRAPPC4-202ENST00000434101 NESP48681 1621 aa24.46■■□□□ 1.51
TRAPPC4-202ENST00000434101 LAMC3Q9Y6N6 1575 aa24.45■■□□□ 1.5
TRAPPC4-202ENST00000434101 TOP2AP11388 1531 aaKnown RBP24.38■■□□□ 1.49
TRAPPC4-202ENST00000434101 CADPSQ9ULU8 1353 aa24.3■■□□□ 1.48
TRAPPC4-202ENST00000434101 CUX2O14529 1486 aa24.3■■□□□ 1.48
TRAPPC4-202ENST00000434101 PDS5BQ9NTI5 1447 aa24.27■■□□□ 1.48
TRAPPC4-202ENST00000434101 KIF21AQ7Z4S6 1674 aa24.24■■□□□ 1.47
TRAPPC4-202ENST00000434101 THOC2Q8NI27 1593 aaKnown RBP24.17■■□□□ 1.46
TRAPPC4-202ENST00000434101 CFTRP13569 1480 aa24.12■■□□□ 1.45
TRAPPC4-202ENST00000434101 CCDC88BA6NC98 1476 aa24.07■■□□□ 1.44
TRAPPC4-202ENST00000434101 FANCD2Q9BXW9 1451 aa24.03■■□□□ 1.44
TRAPPC4-202ENST00000434101 MRC2Q9UBG0 1479 aa24.03■■□□□ 1.44
TRAPPC4-202ENST00000434101 CEP164Q9UPV0 1460 aa24.03■■□□□ 1.44
TRAPPC4-202ENST00000434101 PRDM2Q13029 1718 aa24.03■■□□□ 1.44
TRAPPC4-202ENST00000434101 WDR62O43379 1518 aa23.95■■□□□ 1.43
TRAPPC4-202ENST00000434101 SUPT5HO00267 1087 aaKnown RBP23.79■■□□□ 1.4
TRAPPC4-202ENST00000434101 URB2Q14146 1524 aaKnown RBP23.78■■□□□ 1.4
TRAPPC4-202ENST00000434101 DNAJC5Q9H3Z4 198 aa23.71■■□□□ 1.39
TRAPPC4-202ENST00000434101 ABCC8Q09428 1581 aa23.66■■□□□ 1.38
TRAPPC4-202ENST00000434101 TOPBP1Q92547 1522 aa23.63■■□□□ 1.37
TRAPPC4-202ENST00000434101 DNMBPQ6XZF7 1577 aa23.61■■□□□ 1.37
TRAPPC4-202ENST00000434101 IFT140Q96RY7 1462 aa23.54■■□□□ 1.36
TRAPPC4-202ENST00000434101 POLA1P09884 1462 aaPredicted RBP23.41■■□□□ 1.34
TRAPPC4-202ENST00000434101 ZNF608Q9ULD9 1512 aaPredicted RBP23.39■■□□□ 1.34
TRAPPC4-202ENST00000434101 TARBP1Q13395 1621 aaKnown RBP23.38■■□□□ 1.33
TRAPPC4-202ENST00000434101 CUX1P39880 1505 aa23.37■■□□□ 1.33
TRAPPC4-202ENST00000434101 EIF4G3O43432 1585 aaKnown RBP23.34■■□□□ 1.33
TRAPPC4-202ENST00000434101 FGD5Q6ZNL6 1462 aa23.33■■□□□ 1.33
TRAPPC4-202ENST00000434101 SOGA1O94964 1423 aa23.32■■□□□ 1.32
TRAPPC4-202ENST00000434101 RAD54L2Q9Y4B4 1467 aa23.29■■□□□ 1.32
TRAPPC4-202ENST00000434101 AQRO60306 1485 aaKnown RBP eCLIP23.25■■□□□ 1.311e-6■■■■□ 24.3
TRAPPC4-202ENST00000434101 WDR97A6NE52 1622 aa23.25■■□□□ 1.31
TRAPPC4-202ENST00000434101 OSCARQ8IYS5 282 aa23.24■■□□□ 1.31
TRAPPC4-202ENST00000434101 WRNQ14191 1432 aaPredicted RBP eCLIP23.17■■□□□ 1.3
TRAPPC4-202ENST00000434101 TDRD9Q8NDG6 1382 aaKnown RBP23.17■■□□□ 1.3
TRAPPC4-202ENST00000434101 BIVM-ERCC5R4GMW8 1640 aa23.16■■□□□ 1.3
TRAPPC4-202ENST00000434101 TOP2BQ02880 1626 aa23.15■■□□□ 1.3
TRAPPC4-202ENST00000434101 CHD1O14646 1710 aa23.11■■□□□ 1.29
TRAPPC4-202ENST00000434101 SYNJ1O43426 1573 aa23.11■■□□□ 1.29
TRAPPC4-202ENST00000434101 ABCA10Q8WWZ4 1543 aa23.1■■□□□ 1.29
TRAPPC4-202ENST00000434101 GRIN2BQ13224 1484 aa23.08■■□□□ 1.29
TRAPPC4-202ENST00000434101 PBRM1Q86U86 1689 aa23.06■■□□□ 1.28
TRAPPC4-202ENST00000434101 GAPVD1Q14C86 1478 aa23.05■■□□□ 1.28
TRAPPC4-202ENST00000434101 SNAPC4Q5SXM2 1469 aa23.05■■□□□ 1.28
TRAPPC4-202ENST00000434101 MAGI1Q96QZ7 1491 aaPredicted RBP23.05■■□□□ 1.28
TRAPPC4-202ENST00000434101 ABCA5Q8WWZ7 1642 aa23.04■■□□□ 1.28
TRAPPC4-202ENST00000434101 FBLN2P98095 1184 aa23.03■■□□□ 1.28
TRAPPC4-202ENST00000434101 SYNJ2O15056 1496 aa22.95■■□□□ 1.26
TRAPPC4-202ENST00000434101 CHMP7Q8WUX9 453 aaPredicted RBP22.95■■□□□ 1.26
TRAPPC4-202ENST00000434101 RIMBP3CA6NJZ7 1639 aa22.9■■□□□ 1.26
TRAPPC4-202ENST00000434101 RIMBP3BA6NNM3 1639 aa22.9■■□□□ 1.26
TRAPPC4-202ENST00000434101 RIMBP3Q9UFD9 1639 aa22.9■■□□□ 1.26
TRAPPC4-202ENST00000434101 TRIM41Q8WV44 630 aa22.86■■□□□ 1.25
TRAPPC4-202ENST00000434101 ARHGEF11O15085 1522 aa22.86■■□□□ 1.25
TRAPPC4-202ENST00000434101 ERICH3Q5RHP9 1530 aa22.84■■□□□ 1.25
TRAPPC4-202ENST00000434101 ADAMTS12P58397 1594 aa22.83■■□□□ 1.25
TRAPPC4-202ENST00000434101 CLASP1Q7Z460 1538 aa22.82■■□□□ 1.24
TRAPPC4-202ENST00000434101 FHAD1B1AJZ9 1412 aa22.78■■□□□ 1.24
TRAPPC4-202ENST00000434101 GRIN2AQ12879 1464 aa22.77■■□□□ 1.24
TRAPPC4-202ENST00000434101 KIF27Q86VH2 1401 aa22.72■■□□□ 1.23
TRAPPC4-202ENST00000434101 NUP160Q12769 1436 aa22.66■■□□□ 1.22
TRAPPC4-202ENST00000434101 CEP170Q5SW79 1584 aa22.66■■□□□ 1.22
TRAPPC4-202ENST00000434101 ARAP1Q96P48 1450 aa22.65■■□□□ 1.22
TRAPPC4-202ENST00000434101 CYB5RLQ6IPT4 315 aa22.64■■□□□ 1.21
TRAPPC4-202ENST00000434101 CUL7Q14999 1698 aa22.63■■□□□ 1.21
TRAPPC4-202ENST00000434101 IGF1RP08069 1367 aa22.61■■□□□ 1.21
TRAPPC4-202ENST00000434101 SHROOM2Q13796 1616 aa22.54■■□□□ 1.2
TRAPPC4-202ENST00000434101 RUSC2Q8N2Y8 1516 aa22.49■■□□□ 1.19
TRAPPC4-202ENST00000434101 CARMIL1Q5VZK9 1371 aa22.49■■□□□ 1.19
TRAPPC4-202ENST00000434101 ERCC6L2Q5T890 1561 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms