RNA–Protein interactions for RNA: ENST00000437642.6

MMP2-202, Transcript of matrix metallopeptidase 2, humanhuman

TSL 1 (best) BASIC

Gene MMP2, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2-202ENST00000437642 NISCHQ9Y2I1 1504 aa25.46■■□□□ 1.67
MMP2-202ENST00000437642 SHROOM4Q9ULL8 1493 aa21.77■■□□□ 1.08
MMP2-202ENST00000437642 CCDC180Q9P1Z9 1646 aa21.6■■□□□ 1.05
MMP2-202ENST00000437642 ZCCHC6Q5VYS8 1495 aaKnown RBP21.57■■□□□ 1.04
MMP2-202ENST00000437642 SUPT5HO00267 1087 aaKnown RBP21.36■■□□□ 1.01
MMP2-202ENST00000437642 DCAF8L2P0C7V8 631 aa21.04■□□□□ 0.96
MMP2-202ENST00000437642 DCAF1Q9Y4B6 1507 aa20.87■□□□□ 0.93
MMP2-202ENST00000437642 CHIC1Q5VXU3 224 aa20.82■□□□□ 0.92
MMP2-202ENST00000437642 MYO15BQ96JP2 1530 aa20.82■□□□□ 0.92
MMP2-202ENST00000437642 ABCC9O60706 1549 aa20.37■□□□□ 0.85
MMP2-202ENST00000437642 HRCP23327 699 aa20.29■□□□□ 0.84
MMP2-202ENST00000437642 SCRIBQ14160 1630 aa20.28■□□□□ 0.84
MMP2-202ENST00000437642 PCGF6Q9BYE7 350 aa20.24■□□□□ 0.83
MMP2-202ENST00000437642 LOC105371045A0A1W2PR82 267 aa20.21■□□□□ 0.83
MMP2-202ENST00000437642 RSF1Q96T23 1441 aaPredicted RBP20.18■□□□□ 0.82
MMP2-202ENST00000437642 RB1CC1Q8TDY2 1594 aa20.01■□□□□ 0.79
MMP2-202ENST00000437642 NACADO15069 1562 aa19.94■□□□□ 0.78
MMP2-202ENST00000437642 PPARGC1BQ86YN6 1023 aaKnown RBP19.9■□□□□ 0.78
MMP2-202ENST00000437642 CECR2Q9BXF3 1484 aa19.88■□□□□ 0.77
MMP2-202ENST00000437642 TRIM41Q8WV44 630 aa19.87■□□□□ 0.77
MMP2-202ENST00000437642 MROH2BQ7Z745 1585 aa19.82■□□□□ 0.76
MMP2-202ENST00000437642 TRIM26Q12899 539 aaPredicted RBP19.81■□□□□ 0.76
MMP2-202ENST00000437642 FAM9AQ8IZU1 332 aaPredicted RBP19.74■□□□□ 0.75
MMP2-202ENST00000437642 WIZO95785 1651 aa19.72■□□□□ 0.75
MMP2-202ENST00000437642 BAZ1AQ9NRL2 1556 aaPredicted RBP19.59■□□□□ 0.73
MMP2-202ENST00000437642 EHMT2Q96KQ7 1210 aa19.58■□□□□ 0.72
MMP2-202ENST00000437642 EIF4G1Q04637 1599 aaKnown RBP19.51■□□□□ 0.71
MMP2-202ENST00000437642 TOP2AP11388 1531 aaKnown RBP19.39■□□□□ 0.69
MMP2-202ENST00000437642 SMARCA4P51532 1647 aa19.38■□□□□ 0.69
MMP2-202ENST00000437642 ZEB1P37275 1124 aaPredicted RBP19.37■□□□□ 0.69
MMP2-202ENST00000437642 UNC13AQ9UPW8 1703 aa19.36■□□□□ 0.69
MMP2-202ENST00000437642 CCDC88BA6NC98 1476 aa19.32■□□□□ 0.68
MMP2-202ENST00000437642 ABCC8Q09428 1581 aa19.31■□□□□ 0.68
MMP2-202ENST00000437642 SMARCA2P51531 1590 aa19.3■□□□□ 0.68
MMP2-202ENST00000437642 SOGA1O94964 1423 aa19.14■□□□□ 0.65
MMP2-202ENST00000437642 BICRAQ9NZM4 1560 aa19.12■□□□□ 0.65
MMP2-202ENST00000437642 PABPN1Q86U42 306 aaKnown RBP eCLIP19.1■□□□□ 0.65
MMP2-202ENST00000437642 CEP162Q5TB80 1403 aa19.07■□□□□ 0.64
MMP2-202ENST00000437642 WRNQ14191 1432 aaPredicted RBP eCLIP19.06■□□□□ 0.64
MMP2-202ENST00000437642 RUSC2Q8N2Y8 1516 aa19.05■□□□□ 0.64
MMP2-202ENST00000437642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.04■□□□□ 0.64
MMP2-202ENST00000437642 TNIKQ9UKE5 1360 aa19.02■□□□□ 0.63
MMP2-202ENST00000437642 PEG3Q9GZU2 1588 aa19■□□□□ 0.63
MMP2-202ENST00000437642 EEA1Q15075 1411 aa18.99■□□□□ 0.63
MMP2-202ENST00000437642 CSRNP3Q8WYN3 585 aa18.99■□□□□ 0.63
MMP2-202ENST00000437642 TTBK1Q5TCY1 1321 aaPredicted RBP18.97■□□□□ 0.63
MMP2-202ENST00000437642 CCER1Q8TC90 406 aaPredicted RBP18.96■□□□□ 0.63
MMP2-202ENST00000437642 UBTFP17480 764 aaKnown RBP18.91■□□□□ 0.62
MMP2-202ENST00000437642 GOLGA3Q08378 1498 aa18.9■□□□□ 0.62
MMP2-202ENST00000437642 SYNJ1O43426 1573 aa18.88■□□□□ 0.61
MMP2-202ENST00000437642 ATAD2BQ9ULI0 1458 aa18.86■□□□□ 0.61
MMP2-202ENST00000437642 BAZ1BQ9UIG0 1483 aaKnown RBP18.8■□□□□ 0.6
MMP2-202ENST00000437642 CEP164Q9UPV0 1460 aa18.78■□□□□ 0.6
MMP2-202ENST00000437642 KIF21BO75037 1637 aa18.77■□□□□ 0.6
MMP2-202ENST00000437642 SCAF1Q9H7N4 1312 aaKnown RBP18.76■□□□□ 0.59
MMP2-202ENST00000437642 CLIP1P30622 1438 aa18.69■□□□□ 0.58
MMP2-202ENST00000437642 RAPGEF2Q9Y4G8 1499 aa18.66■□□□□ 0.58
MMP2-202ENST00000437642 DIEXFQ68CQ4 756 aaKnown RBP18.63■□□□□ 0.57
MMP2-202ENST00000437642 VPS8Q8N3P4 1428 aa18.62■□□□□ 0.57
MMP2-202ENST00000437642 TOP2BQ02880 1626 aa18.62■□□□□ 0.57
MMP2-202ENST00000437642 BIVM-ERCC5R4GMW8 1640 aa18.56■□□□□ 0.56
MMP2-202ENST00000437642 HNRNPUL2Q1KMD3 747 aaKnown RBP18.56■□□□□ 0.56
MMP2-202ENST00000437642 RANGAP1P46060 587 aaPredicted RBP18.54■□□□□ 0.56
MMP2-202ENST00000437642 ACIN1Q9UKV3 1341 aaKnown RBP18.53■□□□□ 0.56
MMP2-202ENST00000437642 NEUROD1Q13562 356 aa18.52■□□□□ 0.56
MMP2-202ENST00000437642 ZNF316A6NFI3 1004 aaPredicted RBP18.47■□□□□ 0.55
MMP2-202ENST00000437642 HMGXB3Q12766 1538 aa18.47■□□□□ 0.55
MMP2-202ENST00000437642 APLP2Q06481 763 aa18.47■□□□□ 0.55
MMP2-202ENST00000437642 NCAPD3P42695 1498 aa18.46■□□□□ 0.55
MMP2-202ENST00000437642 PRXQ9BXM0 1461 aa18.46■□□□□ 0.55
MMP2-202ENST00000437642 ERICH3Q5RHP9 1530 aa18.45■□□□□ 0.54
MMP2-202ENST00000437642 CUX1P39880 1505 aa18.44■□□□□ 0.54
MMP2-202ENST00000437642 ARAP1Q96P48 1450 aa18.41■□□□□ 0.54
MMP2-202ENST00000437642 CENPBP07199 599 aaPredicted RBP18.37■□□□□ 0.53
MMP2-202ENST00000437642 CFTRP13569 1480 aa18.35■□□□□ 0.53
MMP2-202ENST00000437642 KIF27Q86VH2 1401 aa18.34■□□□□ 0.53
MMP2-202ENST00000437642 PELP1Q8IZL8 1130 aaKnown RBP18.33■□□□□ 0.53
MMP2-202ENST00000437642 GTF3C3Q9Y5Q9 886 aa18.32■□□□□ 0.52
MMP2-202ENST00000437642 KANK4Q5T7N3 995 aaPredicted RBP18.31■□□□□ 0.52
MMP2-202ENST00000437642 MIER1Q8N108 512 aa18.25■□□□□ 0.51
MMP2-202ENST00000437642 DHX57Q6P158 1386 aaKnown RBP18.23■□□□□ 0.51
MMP2-202ENST00000437642 ARHGAP35Q9NRY4 1499 aa18.23■□□□□ 0.51
MMP2-202ENST00000437642 YTHDC1Q96MU7 727 aaKnown RBP18.21■□□□□ 0.51
MMP2-202ENST00000437642 RRBP1Q9P2E9 1410 aaKnown RBP18.2■□□□□ 0.5
MMP2-202ENST00000437642 PRDM2Q13029 1718 aa18.2■□□□□ 0.5
MMP2-202ENST00000437642 CLSPNQ9HAW4 1339 aa18.17■□□□□ 0.5
MMP2-202ENST00000437642 CUX2O14529 1486 aa18.16■□□□□ 0.5
MMP2-202ENST00000437642 IGF1RP08069 1367 aa18.15■□□□□ 0.5
MMP2-202ENST00000437642 CADPSQ9ULU8 1353 aa18.12■□□□□ 0.49
MMP2-202ENST00000437642 CCNB3Q8WWL7 1395 aa18.11■□□□□ 0.49
MMP2-202ENST00000437642 FGD5Q6ZNL6 1462 aa18.09■□□□□ 0.49
MMP2-202ENST00000437642 CARMIL1Q5VZK9 1371 aa18.06■□□□□ 0.48
MMP2-202ENST00000437642 TIAM1Q13009 1591 aa18.04■□□□□ 0.48
MMP2-202ENST00000437642 ITGAEP38570 1179 aa18.03■□□□□ 0.48
MMP2-202ENST00000437642 MAP3K1Q13233 1512 aa18■□□□□ 0.47
MMP2-202ENST00000437642 CC2D2AQ9P2K1 1620 aa17.97■□□□□ 0.47
MMP2-202ENST00000437642 RAB3GAP2Q9H2M9 1393 aa17.97■□□□□ 0.47
MMP2-202ENST00000437642 LRRC9Q6ZRR7 1453 aa17.96■□□□□ 0.47
MMP2-202ENST00000437642 FANCD2Q9BXW9 1451 aa17.95■□□□□ 0.46
MMP2-202ENST00000437642 PHLDB1Q86UU1 1377 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms