RNA–Protein interactions for RNA: ENST00000409299.7

PXMP4-203, Transcript of peroxisomal membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PXMP4, Length 5,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP4-203ENST00000409299 DCAF8L2P0C7V8 631 aa21.63■■□□□ 1.05
PXMP4-203ENST00000409299 NISCHQ9Y2I1 1504 aa20.62■□□□□ 0.89
PXMP4-203ENST00000409299 SUPT5HO00267 1087 aaKnown RBP20.02■□□□□ 0.8
PXMP4-203ENST00000409299 SHROOM4Q9ULL8 1493 aa19.86■□□□□ 0.77
PXMP4-203ENST00000409299 EHMT2Q96KQ7 1210 aa19.43■□□□□ 0.7
PXMP4-203ENST00000409299 PELP1Q8IZL8 1130 aaKnown RBP19.34■□□□□ 0.69
PXMP4-203ENST00000409299 FAM9AQ8IZU1 332 aaPredicted RBP19.05■□□□□ 0.64
PXMP4-203ENST00000409299 APLP2Q06481 763 aa19.02■□□□□ 0.64
PXMP4-203ENST00000409299 ZEB1P37275 1124 aaPredicted RBP18.76■□□□□ 0.59
PXMP4-203ENST00000409299 RANGAP1P46060 587 aaPredicted RBP18.75■□□□□ 0.59
PXMP4-203ENST00000409299 TTBK1Q5TCY1 1321 aaPredicted RBP18.67■□□□□ 0.58
PXMP4-203ENST00000409299 ATP1B4Q9UN42 357 aaPredicted RBP18.63■□□□□ 0.57
PXMP4-203ENST00000409299 CENPBP07199 599 aaPredicted RBP18.61■□□□□ 0.57
PXMP4-203ENST00000409299 PCGF6Q9BYE7 350 aa18.6■□□□□ 0.57
PXMP4-203ENST00000409299 TRIM41Q8WV44 630 aa18.57■□□□□ 0.56
PXMP4-203ENST00000409299 CCER1Q8TC90 406 aaPredicted RBP18.44■□□□□ 0.54
PXMP4-203ENST00000409299 UBTFP17480 764 aaKnown RBP18.42■□□□□ 0.54
PXMP4-203ENST00000409299 MYT1Q01538 1121 aa18.36■□□□□ 0.53
PXMP4-203ENST00000409299 ERICH6Q7L0X2 663 aa18.35■□□□□ 0.53
PXMP4-203ENST00000409299 ABCC9O60706 1549 aa18.27■□□□□ 0.51
PXMP4-203ENST00000409299 PABPN1Q86U42 306 aaKnown RBP eCLIP18.15■□□□□ 0.5
PXMP4-203ENST00000409299 NEFLP07196 543 aa18.12■□□□□ 0.49
PXMP4-203ENST00000409299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.1■□□□□ 0.49
PXMP4-203ENST00000409299 HNRNPUL2Q1KMD3 747 aaKnown RBP18.1■□□□□ 0.49
PXMP4-203ENST00000409299 MYT1LQ9UL68 1186 aa18.1■□□□□ 0.49
PXMP4-203ENST00000409299 TRIM26Q12899 539 aaPredicted RBP18.06■□□□□ 0.48
PXMP4-203ENST00000409299 HRCP23327 699 aa17.92■□□□□ 0.46
PXMP4-203ENST00000409299 PPARGC1BQ86YN6 1023 aaKnown RBP17.88■□□□□ 0.45
PXMP4-203ENST00000409299 YTHDC1Q96MU7 727 aaKnown RBP17.85■□□□□ 0.45
PXMP4-203ENST00000409299 ITGAEP38570 1179 aa17.78■□□□□ 0.44
PXMP4-203ENST00000409299 CHIC1Q5VXU3 224 aa17.72■□□□□ 0.43
PXMP4-203ENST00000409299 FBLN2P98095 1184 aa17.65■□□□□ 0.42
PXMP4-203ENST00000409299 POLR3GLQ9BT43 218 aa17.55■□□□□ 0.4
PXMP4-203ENST00000409299 DAXXQ9UER7 740 aaPredicted RBP17.55■□□□□ 0.4
PXMP4-203ENST00000409299 LOC105371045A0A1W2PR82 267 aa17.54■□□□□ 0.4
PXMP4-203ENST00000409299 SLC4A1APQ9BWU0 796 aaKnown RBP17.39■□□□□ 0.37
PXMP4-203ENST00000409299 FAM50AQ14320 339 aaKnown RBP17.38■□□□□ 0.37
PXMP4-203ENST00000409299 DIEXFQ68CQ4 756 aaKnown RBP17.37■□□□□ 0.37
PXMP4-203ENST00000409299 CNGB1Q14028 1251 aaPredicted RBP17.33■□□□□ 0.37
PXMP4-203ENST00000409299 TRIM52Q96A61 297 aa17.29■□□□□ 0.36
PXMP4-203ENST00000409299 SCRIBQ14160 1630 aa17.29■□□□□ 0.36
PXMP4-203ENST00000409299 ARID3CA6NKF2 412 aa17.24■□□□□ 0.35
PXMP4-203ENST00000409299 RTL5Q5HYW3 569 aaPredicted RBP17.23■□□□□ 0.35
PXMP4-203ENST00000409299 P3H3Q8IVL6 736 aa17.21■□□□□ 0.35
PXMP4-203ENST00000409299 ZNF316A6NFI3 1004 aaPredicted RBP17.15■□□□□ 0.34
PXMP4-203ENST00000409299 BCANQ96GW7 911 aa17.1■□□□□ 0.33
PXMP4-203ENST00000409299 NPM1P06748 294 aaKnown RBP eCLIP17.06■□□□□ 0.32
PXMP4-203ENST00000409299 ZNF777Q9ULD5 760 aaPredicted RBP17.06■□□□□ 0.32
PXMP4-203ENST00000409299 ANP32CO43423 234 aa17.05■□□□□ 0.32
PXMP4-203ENST00000409299 NEUROD1Q13562 356 aa17.05■□□□□ 0.32
PXMP4-203ENST00000409299 ZNF326Q5BKZ1 582 aaKnown RBP17.05■□□□□ 0.32
PXMP4-203ENST00000409299 CLSPNQ9HAW4 1339 aa17.04■□□□□ 0.32
PXMP4-203ENST00000409299 CSRNP3Q8WYN3 585 aa17.02■□□□□ 0.31
PXMP4-203ENST00000409299 ESF1Q9H501 851 aaKnown RBP17.02■□□□□ 0.31
PXMP4-203ENST00000409299 CDK11AQ9UQ88 783 aaPredicted RBP17■□□□□ 0.31
PXMP4-203ENST00000409299 GTF3C3Q9Y5Q9 886 aa17■□□□□ 0.31
PXMP4-203ENST00000409299 ZCCHC6Q5VYS8 1495 aaKnown RBP16.98■□□□□ 0.31
PXMP4-203ENST00000409299 PLPPR3Q6T4P5 718 aa16.97■□□□□ 0.31
PXMP4-203ENST00000409299 CCDC180Q9P1Z9 1646 aa16.97■□□□□ 0.31
PXMP4-203ENST00000409299 RB1CC1Q8TDY2 1594 aa16.95■□□□□ 0.3
PXMP4-203ENST00000409299 DCAF1Q9Y4B6 1507 aa16.89■□□□□ 0.29
PXMP4-203ENST00000409299 ACIN1Q9UKV3 1341 aaKnown RBP16.89■□□□□ 0.29
PXMP4-203ENST00000409299 CHMP7Q8WUX9 453 aaPredicted RBP16.88■□□□□ 0.29
PXMP4-203ENST00000409299 STAG3Q9UJ98 1225 aa16.84■□□□□ 0.29
PXMP4-203ENST00000409299 CHGAP10645 457 aaKnown RBP16.8■□□□□ 0.28
PXMP4-203ENST00000409299 SLC24A1O60721 1099 aa16.79■□□□□ 0.28
PXMP4-203ENST00000409299 ZBTB47Q9UFB7 747 aaPredicted RBP16.78■□□□□ 0.28
PXMP4-203ENST00000409299 ANP32AP39687 249 aaKnown RBP16.72■□□□□ 0.27
PXMP4-203ENST00000409299 CANXP27824 592 aaKnown RBP16.68■□□□□ 0.26
PXMP4-203ENST00000409299 NACADO15069 1562 aa16.68■□□□□ 0.26
PXMP4-203ENST00000409299 NEFMP07197 916 aa16.67■□□□□ 0.26
PXMP4-203ENST00000409299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.65■□□□□ 0.26
PXMP4-203ENST00000409299 ERCC6Q03468 1493 aa16.65■□□□□ 0.26
PXMP4-203ENST00000409299 KCNH8Q96L42 1107 aa16.61■□□□□ 0.25
PXMP4-203ENST00000409299 BAZ1BQ9UIG0 1483 aaKnown RBP16.6■□□□□ 0.25
PXMP4-203ENST00000409299 CHIC2Q9UKJ5 165 aa16.6■□□□□ 0.25
PXMP4-203ENST00000409299 TONSLQ96HA7 1378 aa16.6■□□□□ 0.25
PXMP4-203ENST00000409299 TSPY4P0CV99 314 aa16.58■□□□□ 0.25
PXMP4-203ENST00000409299 TSPY10P0CW01 314 aa16.58■□□□□ 0.25
PXMP4-203ENST00000409299 MTUS2Q5JR59 1369 aa16.52■□□□□ 0.24
PXMP4-203ENST00000409299 BCL11AQ9H165 835 aa16.51■□□□□ 0.23
PXMP4-203ENST00000409299 FKBP8Q14318 412 aa16.5■□□□□ 0.23
PXMP4-203ENST00000409299 PLEKHD1A6NEE1 506 aa16.48■□□□□ 0.23
PXMP4-203ENST00000409299 ARID4BQ4LE39 1312 aaPredicted RBP16.48■□□□□ 0.23
PXMP4-203ENST00000409299 SCAF1Q9H7N4 1312 aaKnown RBP16.45■□□□□ 0.22
PXMP4-203ENST00000409299 RSF1Q96T23 1441 aaPredicted RBP16.44■□□□□ 0.22
PXMP4-203ENST00000409299 ANP32BQ92688 251 aaKnown RBP16.44■□□□□ 0.22
PXMP4-203ENST00000409299 UPF2Q9HAU5 1272 aaKnown RBP16.43■□□□□ 0.22
PXMP4-203ENST00000409299 EEA1Q15075 1411 aa16.43■□□□□ 0.22
PXMP4-203ENST00000409299 HNRNPUQ00839 825 aaKnown RBP eCLIP16.42■□□□□ 0.22
PXMP4-203ENST00000409299 SENP3Q9H4L4 574 aaPredicted RBP16.42■□□□□ 0.22
PXMP4-203ENST00000409299 TRHP20396 242 aaPredicted RBP16.4■□□□□ 0.22
PXMP4-203ENST00000409299 PPP1R15AO75807 674 aaPredicted RBP16.39■□□□□ 0.21
PXMP4-203ENST00000409299 NPM2Q86SE8 214 aaKnown RBP16.39■□□□□ 0.21
PXMP4-203ENST00000409299 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.39■□□□□ 0.21
PXMP4-203ENST00000409299 KDM2AQ9Y2K7 1162 aa16.38■□□□□ 0.21
PXMP4-203ENST00000409299 WRNQ14191 1432 aaPredicted RBP eCLIP16.37■□□□□ 0.21
PXMP4-203ENST00000409299 DDX10Q13206 875 aaKnown RBP16.36■□□□□ 0.21
PXMP4-203ENST00000409299 CLIP1P30622 1438 aa16.36■□□□□ 0.21
PXMP4-203ENST00000409299 C14orf37Q86TY3 774 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms