RNA–Protein interactions for RNA: ENST00000425948.2

AP000346.2-202, humanhuman

BASIC

Gene AP000346.2, Length 383 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000346.2-202ENST00000425948 NISCHQ9Y2I1 1504 aa31.3■■■□□ 2.6
AP000346.2-202ENST00000425948 CCDC180Q9P1Z9 1646 aa27.78■■■□□ 2.04
AP000346.2-202ENST00000425948 ABCC9O60706 1549 aa26.97■■□□□ 1.91
AP000346.2-202ENST00000425948 ZCCHC6Q5VYS8 1495 aaKnown RBP26.14■■□□□ 1.78
AP000346.2-202ENST00000425948 NACADO15069 1562 aa26.03■■□□□ 1.76
AP000346.2-202ENST00000425948 RB1CC1Q8TDY2 1594 aa26.01■■□□□ 1.75
AP000346.2-202ENST00000425948 DCAF8L2P0C7V8 631 aa25.94■■□□□ 1.74
AP000346.2-202ENST00000425948 MYO15BQ96JP2 1530 aa25.93■■□□□ 1.74
AP000346.2-202ENST00000425948 DCAF1Q9Y4B6 1507 aa25.89■■□□□ 1.74
AP000346.2-202ENST00000425948 UNC13AQ9UPW8 1703 aa25.55■■□□□ 1.68
AP000346.2-202ENST00000425948 SCRIBQ14160 1630 aa25.37■■□□□ 1.65
AP000346.2-202ENST00000425948 BICRAQ9NZM4 1560 aa25.3■■□□□ 1.64
AP000346.2-202ENST00000425948 PABPN1Q86U42 306 aaKnown RBP eCLIP25.19■■□□□ 1.627e-8■□□□□ 9.5
AP000346.2-202ENST00000425948 SHROOM4Q9ULL8 1493 aa24.95■■□□□ 1.58
AP000346.2-202ENST00000425948 DNAJC5BQ9UF47 199 aa24.58■■□□□ 1.53
AP000346.2-202ENST00000425948 EIF4G1Q04637 1599 aaKnown RBP24.57■■□□□ 1.52
AP000346.2-202ENST00000425948 CC2D2AQ9P2K1 1620 aa24.43■■□□□ 1.5
AP000346.2-202ENST00000425948 CECR2Q9BXF3 1484 aa24.38■■□□□ 1.49
AP000346.2-202ENST00000425948 SMARCA4P51532 1647 aa24.28■■□□□ 1.48
AP000346.2-202ENST00000425948 BAZ1AQ9NRL2 1556 aaPredicted RBP24.23■■□□□ 1.47
AP000346.2-202ENST00000425948 MROH2BQ7Z745 1585 aa24.15■■□□□ 1.46
AP000346.2-202ENST00000425948 ATAD2BQ9ULI0 1458 aa24.07■■□□□ 1.44
AP000346.2-202ENST00000425948 PEG3Q9GZU2 1588 aa24.03■■□□□ 1.44
AP000346.2-202ENST00000425948 SMARCA2P51531 1590 aa24.03■■□□□ 1.44
AP000346.2-202ENST00000425948 NCAPD3P42695 1498 aa24■■□□□ 1.43
AP000346.2-202ENST00000425948 HMGXB3Q12766 1538 aa23.94■■□□□ 1.42
AP000346.2-202ENST00000425948 WIZO95785 1651 aa23.92■■□□□ 1.42
AP000346.2-202ENST00000425948 RSF1Q96T23 1441 aaPredicted RBP23.91■■□□□ 1.42
AP000346.2-202ENST00000425948 BAZ1BQ9UIG0 1483 aaKnown RBP23.86■■□□□ 1.41
AP000346.2-202ENST00000425948 TOP2AP11388 1531 aaKnown RBP23.64■■□□□ 1.38
AP000346.2-202ENST00000425948 NESP48681 1621 aa23.42■■□□□ 1.34
AP000346.2-202ENST00000425948 SUPT5HO00267 1087 aaKnown RBP23.36■■□□□ 1.33
AP000346.2-202ENST00000425948 LAMC3Q9Y6N6 1575 aa23.35■■□□□ 1.33
AP000346.2-202ENST00000425948 CCDC88BA6NC98 1476 aa23.35■■□□□ 1.33
AP000346.2-202ENST00000425948 CADPSQ9ULU8 1353 aa23.28■■□□□ 1.32
AP000346.2-202ENST00000425948 CFTRP13569 1480 aa23.23■■□□□ 1.31
AP000346.2-202ENST00000425948 KIF21AQ7Z4S6 1674 aa23.19■■□□□ 1.3
AP000346.2-202ENST00000425948 ERCC6Q03468 1493 aa23.18■■□□□ 1.3
AP000346.2-202ENST00000425948 PRDM2Q13029 1718 aa23.16■■□□□ 1.3
AP000346.2-202ENST00000425948 PDS5BQ9NTI5 1447 aa23.13■■□□□ 1.29
AP000346.2-202ENST00000425948 THOC2Q8NI27 1593 aaKnown RBP23.06■■□□□ 1.28
AP000346.2-202ENST00000425948 FANCD2Q9BXW9 1451 aa23.05■■□□□ 1.28
AP000346.2-202ENST00000425948 CEP164Q9UPV0 1460 aa23■■□□□ 1.27
AP000346.2-202ENST00000425948 MRC2Q9UBG0 1479 aa22.94■■□□□ 1.26
AP000346.2-202ENST00000425948 WDR62O43379 1518 aa22.89■■□□□ 1.26
AP000346.2-202ENST00000425948 CUX2O14529 1486 aa22.89■■□□□ 1.25
AP000346.2-202ENST00000425948 URB2Q14146 1524 aaKnown RBP22.85■■□□□ 1.25
AP000346.2-202ENST00000425948 TOPBP1Q92547 1522 aa22.72■■□□□ 1.23
AP000346.2-202ENST00000425948 DNMBPQ6XZF7 1577 aa22.72■■□□□ 1.23
AP000346.2-202ENST00000425948 ABCC8Q09428 1581 aa22.66■■□□□ 1.22
AP000346.2-202ENST00000425948 CUX1P39880 1505 aa22.65■■□□□ 1.22
AP000346.2-202ENST00000425948 POLA1P09884 1462 aaPredicted RBP22.55■■□□□ 1.2
AP000346.2-202ENST00000425948 SYNJ1O43426 1573 aa22.52■■□□□ 1.2
AP000346.2-202ENST00000425948 FGD5Q6ZNL6 1462 aa22.52■■□□□ 1.2
AP000346.2-202ENST00000425948 WRNQ14191 1432 aaPredicted RBP eCLIP22.51■■□□□ 1.19
AP000346.2-202ENST00000425948 BIVM-ERCC5R4GMW8 1640 aa22.51■■□□□ 1.19
AP000346.2-202ENST00000425948 TARBP1Q13395 1621 aaKnown RBP22.5■■□□□ 1.19
AP000346.2-202ENST00000425948 IFT140Q96RY7 1462 aa22.49■■□□□ 1.19
AP000346.2-202ENST00000425948 TOP2BQ02880 1626 aa22.49■■□□□ 1.19
AP000346.2-202ENST00000425948 RAD54L2Q9Y4B4 1467 aa22.44■■□□□ 1.18
AP000346.2-202ENST00000425948 ZNF608Q9ULD9 1512 aaPredicted RBP22.43■■□□□ 1.18
AP000346.2-202ENST00000425948 WDR97A6NE52 1622 aa22.41■■□□□ 1.18
AP000346.2-202ENST00000425948 SOGA1O94964 1423 aa22.4■■□□□ 1.18
AP000346.2-202ENST00000425948 EIF4G3O43432 1585 aaKnown RBP22.38■■□□□ 1.17
AP000346.2-202ENST00000425948 ABCA10Q8WWZ4 1543 aa22.3■■□□□ 1.16
AP000346.2-202ENST00000425948 AQRO60306 1485 aaKnown RBP eCLIP22.29■■□□□ 1.16
AP000346.2-202ENST00000425948 TDRD9Q8NDG6 1382 aaKnown RBP22.26■■□□□ 1.15
AP000346.2-202ENST00000425948 ABCA5Q8WWZ7 1642 aa22.25■■□□□ 1.15
AP000346.2-202ENST00000425948 PBRM1Q86U86 1689 aa22.2■■□□□ 1.14
AP000346.2-202ENST00000425948 GAPVD1Q14C86 1478 aa22.17■■□□□ 1.14
AP000346.2-202ENST00000425948 GRIN2BQ13224 1484 aa22.14■■□□□ 1.13
AP000346.2-202ENST00000425948 SNAPC4Q5SXM2 1469 aa22.11■■□□□ 1.13
AP000346.2-202ENST00000425948 CHD1O14646 1710 aa22.09■■□□□ 1.13
AP000346.2-202ENST00000425948 MAGI1Q96QZ7 1491 aaPredicted RBP22.07■■□□□ 1.12
AP000346.2-202ENST00000425948 ERICH3Q5RHP9 1530 aa22.03■■□□□ 1.12
AP000346.2-202ENST00000425948 TRIM41Q8WV44 630 aa22.02■■□□□ 1.12
AP000346.2-202ENST00000425948 ADAMTS12P58397 1594 aa22.01■■□□□ 1.11
AP000346.2-202ENST00000425948 KIF27Q86VH2 1401 aa22■■□□□ 1.11
AP000346.2-202ENST00000425948 SYNJ2O15056 1496 aa21.98■■□□□ 1.11
AP000346.2-202ENST00000425948 RUSC2Q8N2Y8 1516 aa21.94■■□□□ 1.1
AP000346.2-202ENST00000425948 CHIC1Q5VXU3 224 aa21.93■■□□□ 1.1
AP000346.2-202ENST00000425948 DNAJC5Q9H3Z4 198 aa21.93■■□□□ 1.1
AP000346.2-202ENST00000425948 FHAD1B1AJZ9 1412 aa21.9■■□□□ 1.1
AP000346.2-202ENST00000425948 IGF1RP08069 1367 aa21.9■■□□□ 1.1
AP000346.2-202ENST00000425948 FBLN2P98095 1184 aa21.9■■□□□ 1.1
AP000346.2-202ENST00000425948 OSCARQ8IYS5 282 aa21.9■■□□□ 1.1
AP000346.2-202ENST00000425948 CUL7Q14999 1698 aa21.88■■□□□ 1.09
AP000346.2-202ENST00000425948 GRIN2AQ12879 1464 aa21.88■■□□□ 1.09
AP000346.2-202ENST00000425948 CHMP7Q8WUX9 453 aaPredicted RBP21.87■■□□□ 1.09
AP000346.2-202ENST00000425948 CLASP1Q7Z460 1538 aa21.82■■□□□ 1.08
AP000346.2-202ENST00000425948 CEP170Q5SW79 1584 aa21.81■■□□□ 1.08
AP000346.2-202ENST00000425948 NUP160Q12769 1436 aa21.78■■□□□ 1.08
AP000346.2-202ENST00000425948 CARMIL1Q5VZK9 1371 aa21.76■■□□□ 1.07
AP000346.2-202ENST00000425948 EEA1Q15075 1411 aa21.69■■□□□ 1.06
AP000346.2-202ENST00000425948 PRXQ9BXM0 1461 aa21.67■■□□□ 1.06
AP000346.2-202ENST00000425948 RAPGEF2Q9Y4G8 1499 aa21.67■■□□□ 1.06
AP000346.2-202ENST00000425948 RIMBP3CA6NJZ7 1639 aa21.66■■□□□ 1.06
AP000346.2-202ENST00000425948 RIMBP3BA6NNM3 1639 aa21.66■■□□□ 1.06
AP000346.2-202ENST00000425948 RIMBP3Q9UFD9 1639 aa21.66■■□□□ 1.06
AP000346.2-202ENST00000425948 ARHGEF11O15085 1522 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms