RNA–Protein interactions for RNA: ENST00000562109.5

GRIN2A-206, Transcript of glutamate ionotropic receptor NMDA type subunit 2A, humanhuman

TSL 1 (best) BASIC

Gene GRIN2A, Length 4,338 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN2A-206ENST00000562109 NISCHQ9Y2I1 1504 aa21.99■■□□□ 1.11
GRIN2A-206ENST00000562109 SUPT5HO00267 1087 aaKnown RBP20.63■□□□□ 0.89
GRIN2A-206ENST00000562109 SHROOM4Q9ULL8 1493 aa20.34■□□□□ 0.85
GRIN2A-206ENST00000562109 PELP1Q8IZL8 1130 aaKnown RBP20.3■□□□□ 0.84
GRIN2A-206ENST00000562109 DCAF8L2P0C7V8 631 aa20.23■□□□□ 0.83
GRIN2A-206ENST00000562109 PCGF6Q9BYE7 350 aa20.2■□□□□ 0.82
GRIN2A-206ENST00000562109 HRCP23327 699 aa20.15■□□□□ 0.82
GRIN2A-206ENST00000562109 ZEB1P37275 1124 aaPredicted RBP19.87■□□□□ 0.77
GRIN2A-206ENST00000562109 MYT1Q01538 1121 aa19.84■□□□□ 0.77
GRIN2A-206ENST00000562109 CENPBP07199 599 aaPredicted RBP19.56■□□□□ 0.72
GRIN2A-206ENST00000562109 TRIM26Q12899 539 aaPredicted RBP19.53■□□□□ 0.72
GRIN2A-206ENST00000562109 PPARGC1BQ86YN6 1023 aaKnown RBP19.52■□□□□ 0.71
GRIN2A-206ENST00000562109 CHIC1Q5VXU3 224 aa19.51■□□□□ 0.71
GRIN2A-206ENST00000562109 EHMT2Q96KQ7 1210 aa19.28■□□□□ 0.68
GRIN2A-206ENST00000562109 FAM9AQ8IZU1 332 aaPredicted RBP19.22■□□□□ 0.67
GRIN2A-206ENST00000562109 CCER1Q8TC90 406 aaPredicted RBP19.22■□□□□ 0.67
GRIN2A-206ENST00000562109 TRIM41Q8WV44 630 aa19.17■□□□□ 0.66
GRIN2A-206ENST00000562109 LOC105371045A0A1W2PR82 267 aa19.15■□□□□ 0.66
GRIN2A-206ENST00000562109 DCAF1Q9Y4B6 1507 aa18.98■□□□□ 0.63
GRIN2A-206ENST00000562109 YTHDC1Q96MU7 727 aaKnown RBP18.85■□□□□ 0.61
GRIN2A-206ENST00000562109 APLP2Q06481 763 aa18.83■□□□□ 0.61
GRIN2A-206ENST00000562109 TTBK1Q5TCY1 1321 aaPredicted RBP18.82■□□□□ 0.6
GRIN2A-206ENST00000562109 DIEXFQ68CQ4 756 aaKnown RBP18.8■□□□□ 0.6
GRIN2A-206ENST00000562109 ACIN1Q9UKV3 1341 aaKnown RBP18.8■□□□□ 0.6
GRIN2A-206ENST00000562109 GTF3C3Q9Y5Q9 886 aa18.78■□□□□ 0.6
GRIN2A-206ENST00000562109 SCAF1Q9H7N4 1312 aaKnown RBP18.72■□□□□ 0.59
GRIN2A-206ENST00000562109 MYO15BQ96JP2 1530 aa18.71■□□□□ 0.59
GRIN2A-206ENST00000562109 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.66■□□□□ 0.58
GRIN2A-206ENST00000562109 ERICH6Q7L0X2 663 aa18.54■□□□□ 0.56
GRIN2A-206ENST00000562109 CCDC180Q9P1Z9 1646 aa18.53■□□□□ 0.56
GRIN2A-206ENST00000562109 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.56
GRIN2A-206ENST00000562109 UBTFP17480 764 aaKnown RBP18.51■□□□□ 0.55
GRIN2A-206ENST00000562109 NEFLP07196 543 aa18.48■□□□□ 0.55
GRIN2A-206ENST00000562109 NEUROD1Q13562 356 aa18.47■□□□□ 0.55
GRIN2A-206ENST00000562109 ZNF316A6NFI3 1004 aaPredicted RBP18.4■□□□□ 0.54
GRIN2A-206ENST00000562109 CLSPNQ9HAW4 1339 aa18.26■□□□□ 0.51
GRIN2A-206ENST00000562109 HNRNPUL2Q1KMD3 747 aaKnown RBP18.26■□□□□ 0.51
GRIN2A-206ENST00000562109 RANGAP1P46060 587 aaPredicted RBP18.17■□□□□ 0.5
GRIN2A-206ENST00000562109 MIER1Q8N108 512 aa17.92■□□□□ 0.46
GRIN2A-206ENST00000562109 BCANQ96GW7 911 aa17.91■□□□□ 0.46
GRIN2A-206ENST00000562109 ITGAEP38570 1179 aa17.82■□□□□ 0.44
GRIN2A-206ENST00000562109 CSRNP3Q8WYN3 585 aa17.82■□□□□ 0.44
GRIN2A-206ENST00000562109 ANP32EQ9BTT0 268 aa17.81■□□□□ 0.44
GRIN2A-206ENST00000562109 CDK11AQ9UQ88 783 aaPredicted RBP17.76■□□□□ 0.43
GRIN2A-206ENST00000562109 RSF1Q96T23 1441 aaPredicted RBP17.76■□□□□ 0.43
GRIN2A-206ENST00000562109 RTL5Q5HYW3 569 aaPredicted RBP17.73■□□□□ 0.43
GRIN2A-206ENST00000562109 ATP1B4Q9UN42 357 aaPredicted RBP17.73■□□□□ 0.43
GRIN2A-206ENST00000562109 ANP32CO43423 234 aa17.71■□□□□ 0.42
GRIN2A-206ENST00000562109 FKBP8Q14318 412 aa17.71■□□□□ 0.42
GRIN2A-206ENST00000562109 MYT1LQ9UL68 1186 aa17.69■□□□□ 0.42
GRIN2A-206ENST00000562109 SCRIBQ14160 1630 aa17.64■□□□□ 0.41
GRIN2A-206ENST00000562109 CEP162Q5TB80 1403 aa17.63■□□□□ 0.41
GRIN2A-206ENST00000562109 SUPT16HQ9Y5B9 1047 aaKnown RBP17.62■□□□□ 0.41
GRIN2A-206ENST00000562109 RB1CC1Q8TDY2 1594 aa17.6■□□□□ 0.41
GRIN2A-206ENST00000562109 BCL11AQ9H165 835 aa17.57■□□□□ 0.4
GRIN2A-206ENST00000562109 EEA1Q15075 1411 aa17.56■□□□□ 0.4
GRIN2A-206ENST00000562109 TNIKQ9UKE5 1360 aa17.54■□□□□ 0.4
GRIN2A-206ENST00000562109 ABCC9O60706 1549 aa17.52■□□□□ 0.4
GRIN2A-206ENST00000562109 DAXXQ9UER7 740 aaPredicted RBP17.5■□□□□ 0.39
GRIN2A-206ENST00000562109 FAM50AQ14320 339 aaKnown RBP17.46■□□□□ 0.39
GRIN2A-206ENST00000562109 GOLGA3Q08378 1498 aa17.45■□□□□ 0.38
GRIN2A-206ENST00000562109 DDX10Q13206 875 aaKnown RBP17.45■□□□□ 0.38
GRIN2A-206ENST00000562109 CLIP1P30622 1438 aa17.44■□□□□ 0.38
GRIN2A-206ENST00000562109 TSHZ2Q9NRE2 1034 aa17.4■□□□□ 0.38
GRIN2A-206ENST00000562109 ANP32AP39687 249 aaKnown RBP17.4■□□□□ 0.38
GRIN2A-206ENST00000562109 TRIM52Q96A61 297 aa17.37■□□□□ 0.37
GRIN2A-206ENST00000562109 WRNQ14191 1432 aaPredicted RBP eCLIP17.35■□□□□ 0.37
GRIN2A-206ENST00000562109 HNRNPUQ00839 825 aaKnown RBP eCLIP17.34■□□□□ 0.37
GRIN2A-206ENST00000562109 POLR3GLQ9BT43 218 aa17.29■□□□□ 0.36
GRIN2A-206ENST00000562109 RBM19Q9Y4C8 960 aaKnown RBP17.28■□□□□ 0.36
GRIN2A-206ENST00000562109 CEP164Q9UPV0 1460 aa17.27■□□□□ 0.35
GRIN2A-206ENST00000562109 TONSLQ96HA7 1378 aa17.25■□□□□ 0.35
GRIN2A-206ENST00000562109 CNGB1Q14028 1251 aaPredicted RBP17.2■□□□□ 0.34
GRIN2A-206ENST00000562109 NBR1Q14596 966 aa17.19■□□□□ 0.34
GRIN2A-206ENST00000562109 ZBTB47Q9UFB7 747 aaPredicted RBP17.17■□□□□ 0.34
GRIN2A-206ENST00000562109 SOGA1O94964 1423 aa17.16■□□□□ 0.34
GRIN2A-206ENST00000562109 VPS8Q8N3P4 1428 aa17.15■□□□□ 0.34
GRIN2A-206ENST00000562109 CECR2Q9BXF3 1484 aa17.14■□□□□ 0.33
GRIN2A-206ENST00000562109 IRX6P78412 446 aaPredicted RBP17.13■□□□□ 0.33
GRIN2A-206ENST00000562109 CCER2I3L3R5 266 aa17.12■□□□□ 0.33
GRIN2A-206ENST00000562109 CCDC136Q96JN2 1154 aa17.1■□□□□ 0.33
GRIN2A-206ENST00000562109 BAZ1AQ9NRL2 1556 aaPredicted RBP17.09■□□□□ 0.33
GRIN2A-206ENST00000562109 PPP4R2Q9NY27 417 aa17.09■□□□□ 0.33
GRIN2A-206ENST00000562109 CCDC88BA6NC98 1476 aa17.08■□□□□ 0.32
GRIN2A-206ENST00000562109 FAM9BQ8IZU0 186 aa17.07■□□□□ 0.32
GRIN2A-206ENST00000562109 MROH2BQ7Z745 1585 aa17.07■□□□□ 0.32
GRIN2A-206ENST00000562109 NPM2Q86SE8 214 aaKnown RBP17.06■□□□□ 0.32
GRIN2A-206ENST00000562109 TIMELESSQ9UNS1 1208 aa17.06■□□□□ 0.32
GRIN2A-206ENST00000562109 HIRIP3Q9BW71 556 aaPredicted RBP17.05■□□□□ 0.32
GRIN2A-206ENST00000562109 NACADO15069 1562 aa17.04■□□□□ 0.32
GRIN2A-206ENST00000562109 DEKP35659 375 aaKnown RBP17.04■□□□□ 0.32
GRIN2A-206ENST00000562109 ERICH6BQ5W0A0 696 aa17.03■□□□□ 0.32
GRIN2A-206ENST00000562109 PABPN1Q86U42 306 aaKnown RBP eCLIP17.03■□□□□ 0.32
GRIN2A-206ENST00000562109 NOP58Q9Y2X3 529 aaKnown RBP17.03■□□□□ 0.32
GRIN2A-206ENST00000562109 EIF5BO60841 1220 aaKnown RBP17.03■□□□□ 0.32
GRIN2A-206ENST00000562109 MRS2Q9HD23 443 aa17.02■□□□□ 0.32
GRIN2A-206ENST00000562109 ABCC8Q09428 1581 aa17.02■□□□□ 0.31
GRIN2A-206ENST00000562109 CCNB3Q8WWL7 1395 aa17.02■□□□□ 0.31
GRIN2A-206ENST00000562109 DHX57Q6P158 1386 aaKnown RBP16.98■□□□□ 0.31
GRIN2A-206ENST00000562109 EIF4G2P78344 907 aaKnown RBP eCLIP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms