RNA–Protein interactions for RNA: ENST00000262407.5

ITGA2B-201, Transcript of integrin subunit alpha 2b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA2B, Length 3,333 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA2B-201ENST00000262407 NISCHQ9Y2I1 1504 aa25.94■■□□□ 1.74
ITGA2B-201ENST00000262407 CCDC180Q9P1Z9 1646 aa22.9■■□□□ 1.26
ITGA2B-201ENST00000262407 ABCC9O60706 1549 aa22.05■■□□□ 1.12
ITGA2B-201ENST00000262407 ZCCHC6Q5VYS8 1495 aaKnown RBP21.69■■□□□ 1.06
ITGA2B-201ENST00000262407 PPARGC1BQ86YN6 1023 aaKnown RBP21.65■■□□□ 1.06
ITGA2B-201ENST00000262407 HRCP23327 699 aa21.61■■□□□ 1.05
ITGA2B-201ENST00000262407 DCAF8L2P0C7V8 631 aa21.59■■□□□ 1.05
ITGA2B-201ENST00000262407 DCAF1Q9Y4B6 1507 aa21.47■■□□□ 1.03
ITGA2B-201ENST00000262407 NACADO15069 1562 aa21.44■■□□□ 1.02
ITGA2B-201ENST00000262407 MYO15BQ96JP2 1530 aa21.41■■□□□ 1.02
ITGA2B-201ENST00000262407 PCGF6Q9BYE7 350 aa21.39■■□□□ 1.01
ITGA2B-201ENST00000262407 RB1CC1Q8TDY2 1594 aa21.38■■□□□ 1.01
ITGA2B-201ENST00000262407 PELP1Q8IZL8 1130 aaKnown RBP21.35■■□□□ 1.01
ITGA2B-201ENST00000262407 SUPT5HO00267 1087 aaKnown RBP21.01■□□□□ 0.95
ITGA2B-201ENST00000262407 SCRIBQ14160 1630 aa20.95■□□□□ 0.94
ITGA2B-201ENST00000262407 SCAF1Q9H7N4 1312 aaKnown RBP20.89■□□□□ 0.93
ITGA2B-201ENST00000262407 UNC13AQ9UPW8 1703 aa20.88■□□□□ 0.93
ITGA2B-201ENST00000262407 SHROOM4Q9ULL8 1493 aa20.86■□□□□ 0.93
ITGA2B-201ENST00000262407 BICRAQ9NZM4 1560 aa20.68■□□□□ 0.9
ITGA2B-201ENST00000262407 PABPN1Q86U42 306 aaKnown RBP eCLIP20.68■□□□□ 0.9
ITGA2B-201ENST00000262407 MYT1Q01538 1121 aa20.54■□□□□ 0.88
ITGA2B-201ENST00000262407 CHIC1Q5VXU3 224 aa20.3■□□□□ 0.84
ITGA2B-201ENST00000262407 LOC105371045A0A1W2PR82 267 aa20.28■□□□□ 0.84
ITGA2B-201ENST00000262407 GTF3C3Q9Y5Q9 886 aa20.23■□□□□ 0.83
ITGA2B-201ENST00000262407 NEUROD1Q13562 356 aa20.21■□□□□ 0.83
ITGA2B-201ENST00000262407 CECR2Q9BXF3 1484 aa20.16■□□□□ 0.82
ITGA2B-201ENST00000262407 ACIN1Q9UKV3 1341 aaKnown RBP20.13■□□□□ 0.81
ITGA2B-201ENST00000262407 TRIM26Q12899 539 aaPredicted RBP20.13■□□□□ 0.81
ITGA2B-201ENST00000262407 EIF4G1Q04637 1599 aaKnown RBP20.13■□□□□ 0.81
ITGA2B-201ENST00000262407 BAZ1AQ9NRL2 1556 aaPredicted RBP20.1■□□□□ 0.81
ITGA2B-201ENST00000262407 SMARCA4P51532 1647 aa20.06■□□□□ 0.8
ITGA2B-201ENST00000262407 MROH2BQ7Z745 1585 aa20■□□□□ 0.79
ITGA2B-201ENST00000262407 ZEB1P37275 1124 aaPredicted RBP19.97■□□□□ 0.79
ITGA2B-201ENST00000262407 CC2D2AQ9P2K1 1620 aa19.95■□□□□ 0.78
ITGA2B-201ENST00000262407 EHMT2Q96KQ7 1210 aa19.95■□□□□ 0.78
ITGA2B-201ENST00000262407 RSF1Q96T23 1441 aaPredicted RBP19.91■□□□□ 0.78
ITGA2B-201ENST00000262407 YTHDC1Q96MU7 727 aaKnown RBP19.91■□□□□ 0.78
ITGA2B-201ENST00000262407 CENPBP07199 599 aaPredicted RBP19.89■□□□□ 0.77
ITGA2B-201ENST00000262407 SMARCA2P51531 1590 aa19.85■□□□□ 0.77
ITGA2B-201ENST00000262407 ATAD2BQ9ULI0 1458 aa19.84■□□□□ 0.77
ITGA2B-201ENST00000262407 DNAJC5BQ9UF47 199 aa19.84■□□□□ 0.77
ITGA2B-201ENST00000262407 PEG3Q9GZU2 1588 aa19.83■□□□□ 0.77
ITGA2B-201ENST00000262407 WIZO95785 1651 aa19.82■□□□□ 0.76
ITGA2B-201ENST00000262407 NCAPD3P42695 1498 aa19.76■□□□□ 0.75
ITGA2B-201ENST00000262407 BAZ1BQ9UIG0 1483 aaKnown RBP19.73■□□□□ 0.75
ITGA2B-201ENST00000262407 HMGXB3Q12766 1538 aa19.71■□□□□ 0.75
ITGA2B-201ENST00000262407 BCL11AQ9H165 835 aa19.68■□□□□ 0.74
ITGA2B-201ENST00000262407 DIEXFQ68CQ4 756 aaKnown RBP19.67■□□□□ 0.74
ITGA2B-201ENST00000262407 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.66■□□□□ 0.74
ITGA2B-201ENST00000262407 TOP2AP11388 1531 aaKnown RBP19.63■□□□□ 0.73
ITGA2B-201ENST00000262407 FAM9AQ8IZU1 332 aaPredicted RBP19.61■□□□□ 0.73
ITGA2B-201ENST00000262407 CCER1Q8TC90 406 aaPredicted RBP19.59■□□□□ 0.73
ITGA2B-201ENST00000262407 TTBK1Q5TCY1 1321 aaPredicted RBP19.5■□□□□ 0.71
ITGA2B-201ENST00000262407 CCDC88BA6NC98 1476 aa19.39■□□□□ 0.7
ITGA2B-201ENST00000262407 CSRNP3Q8WYN3 585 aa19.23■□□□□ 0.67
ITGA2B-201ENST00000262407 ANP32EQ9BTT0 268 aa19.23■□□□□ 0.67
ITGA2B-201ENST00000262407 CADPSQ9ULU8 1353 aa19.23■□□□□ 0.67
ITGA2B-201ENST00000262407 LAMC3Q9Y6N6 1575 aa19.2■□□□□ 0.66
ITGA2B-201ENST00000262407 PRKCSHP14314 528 aaPredicted RBP19.18■□□□□ 0.66
ITGA2B-201ENST00000262407 CFTRP13569 1480 aa19.18■□□□□ 0.66
ITGA2B-201ENST00000262407 NESP48681 1621 aa19.18■□□□□ 0.66
ITGA2B-201ENST00000262407 MIER1Q8N108 512 aa19.14■□□□□ 0.65
ITGA2B-201ENST00000262407 PRDM2Q13029 1718 aa19.09■□□□□ 0.65
ITGA2B-201ENST00000262407 TRIM41Q8WV44 630 aa19.07■□□□□ 0.64
ITGA2B-201ENST00000262407 PDS5BQ9NTI5 1447 aa19.07■□□□□ 0.64
ITGA2B-201ENST00000262407 BCANQ96GW7 911 aa19.03■□□□□ 0.64
ITGA2B-201ENST00000262407 FANCD2Q9BXW9 1451 aa19.01■□□□□ 0.63
ITGA2B-201ENST00000262407 ZNF316A6NFI3 1004 aaPredicted RBP19.01■□□□□ 0.63
ITGA2B-201ENST00000262407 ERCC6Q03468 1493 aa19■□□□□ 0.63
ITGA2B-201ENST00000262407 TSHZ2Q9NRE2 1034 aa18.99■□□□□ 0.63
ITGA2B-201ENST00000262407 KIF21AQ7Z4S6 1674 aa18.98■□□□□ 0.63
ITGA2B-201ENST00000262407 CEP164Q9UPV0 1460 aa18.96■□□□□ 0.63
ITGA2B-201ENST00000262407 SUPT16HQ9Y5B9 1047 aaKnown RBP18.95■□□□□ 0.62
ITGA2B-201ENST00000262407 MRC2Q9UBG0 1479 aa18.84■□□□□ 0.61
ITGA2B-201ENST00000262407 ABCC8Q09428 1581 aa18.82■□□□□ 0.6
ITGA2B-201ENST00000262407 THOC2Q8NI27 1593 aaKnown RBP18.8■□□□□ 0.6
ITGA2B-201ENST00000262407 WRNQ14191 1432 aaPredicted RBP eCLIP18.79■□□□□ 0.6
ITGA2B-201ENST00000262407 URB2Q14146 1524 aaKnown RBP18.78■□□□□ 0.6
ITGA2B-201ENST00000262407 DNMBPQ6XZF7 1577 aa18.76■□□□□ 0.59
ITGA2B-201ENST00000262407 WDR62O43379 1518 aa18.75■□□□□ 0.59
ITGA2B-201ENST00000262407 TOPBP1Q92547 1522 aa18.75■□□□□ 0.59
ITGA2B-201ENST00000262407 CUX1P39880 1505 aa18.74■□□□□ 0.59
ITGA2B-201ENST00000262407 SYNJ1O43426 1573 aa18.71■□□□□ 0.59
ITGA2B-201ENST00000262407 TOP2BQ02880 1626 aa18.69■□□□□ 0.58
ITGA2B-201ENST00000262407 BIVM-ERCC5R4GMW8 1640 aa18.68■□□□□ 0.58
ITGA2B-201ENST00000262407 HNRNPUL2Q1KMD3 747 aaKnown RBP18.66■□□□□ 0.58
ITGA2B-201ENST00000262407 ITGAEP38570 1179 aa18.64■□□□□ 0.57
ITGA2B-201ENST00000262407 FGD5Q6ZNL6 1462 aa18.63■□□□□ 0.57
ITGA2B-201ENST00000262407 ERICH6Q7L0X2 663 aa18.63■□□□□ 0.57
ITGA2B-201ENST00000262407 CUX2O14529 1486 aa18.62■□□□□ 0.57
ITGA2B-201ENST00000262407 POLA1P09884 1462 aaPredicted RBP18.61■□□□□ 0.57
ITGA2B-201ENST00000262407 FKBP8Q14318 412 aa18.57■□□□□ 0.56
ITGA2B-201ENST00000262407 ANO8Q9HCE9 1232 aaPredicted RBP18.56■□□□□ 0.56
ITGA2B-201ENST00000262407 SOGA1O94964 1423 aa18.56■□□□□ 0.56
ITGA2B-201ENST00000262407 RBM19Q9Y4C8 960 aaKnown RBP18.55■□□□□ 0.56
ITGA2B-201ENST00000262407 IFT140Q96RY7 1462 aa18.54■□□□□ 0.56
ITGA2B-201ENST00000262407 RAD54L2Q9Y4B4 1467 aa18.53■□□□□ 0.56
ITGA2B-201ENST00000262407 TARBP1Q13395 1621 aaKnown RBP18.49■□□□□ 0.55
ITGA2B-201ENST00000262407 CCDC136Q96JN2 1154 aa18.46■□□□□ 0.55
ITGA2B-201ENST00000262407 ABCA10Q8WWZ4 1543 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms