RNA–Protein interactions for RNA: ENST00000377186.3

LINC01556-201, Transcript of long intergenic non-protein coding RNA 1556, humanhuman

TSL 2 BASIC

Gene LINC01556, Length 466 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556-201ENST00000377186 NISCHQ9Y2I1 1504 aa28.08■■■□□ 2.09
LINC01556-201ENST00000377186 CCDC180Q9P1Z9 1646 aa24.46■■□□□ 1.51
LINC01556-201ENST00000377186 ZCCHC6Q5VYS8 1495 aaKnown RBP23.65■■□□□ 1.38
LINC01556-201ENST00000377186 DCAF1Q9Y4B6 1507 aa23.24■■□□□ 1.31
LINC01556-201ENST00000377186 DCAF8L2P0C7V8 631 aa23.03■■□□□ 1.28
LINC01556-201ENST00000377186 ABCC9O60706 1549 aa22.99■■□□□ 1.27
LINC01556-201ENST00000377186 SHROOM4Q9ULL8 1493 aa22.95■■□□□ 1.26
LINC01556-201ENST00000377186 MYO15BQ96JP2 1530 aa22.93■■□□□ 1.26
LINC01556-201ENST00000377186 NACADO15069 1562 aa22.74■■□□□ 1.23
LINC01556-201ENST00000377186 RB1CC1Q8TDY2 1594 aa22.5■■□□□ 1.19
LINC01556-201ENST00000377186 SCRIBQ14160 1630 aa22.49■■□□□ 1.19
LINC01556-201ENST00000377186 SUPT5HO00267 1087 aaKnown RBP22.09■■□□□ 1.13
LINC01556-201ENST00000377186 UNC13AQ9UPW8 1703 aa22.03■■□□□ 1.12
LINC01556-201ENST00000377186 BICRAQ9NZM4 1560 aa21.84■■□□□ 1.09
LINC01556-201ENST00000377186 RSF1Q96T23 1441 aaPredicted RBP21.82■■□□□ 1.08
LINC01556-201ENST00000377186 CECR2Q9BXF3 1484 aa21.8■■□□□ 1.08
LINC01556-201ENST00000377186 MROH2BQ7Z745 1585 aa21.7■■□□□ 1.06
LINC01556-201ENST00000377186 BAZ1AQ9NRL2 1556 aaPredicted RBP21.67■■□□□ 1.06
LINC01556-201ENST00000377186 PABPN1Q86U42 306 aaKnown RBP eCLIP21.67■■□□□ 1.06
LINC01556-201ENST00000377186 SMARCA4P51532 1647 aa21.58■■□□□ 1.04
LINC01556-201ENST00000377186 WIZO95785 1651 aa21.5■■□□□ 1.03
LINC01556-201ENST00000377186 TOP2AP11388 1531 aaKnown RBP21.34■■□□□ 1.01
LINC01556-201ENST00000377186 PEG3Q9GZU2 1588 aa21.31■■□□□ 1
LINC01556-201ENST00000377186 CHIC1Q5VXU3 224 aa21.25■□□□□ 0.99
LINC01556-201ENST00000377186 ATAD2BQ9ULI0 1458 aa21.19■□□□□ 0.98
LINC01556-201ENST00000377186 SMARCA2P51531 1590 aa21.19■□□□□ 0.98
LINC01556-201ENST00000377186 EIF4G1Q04637 1599 aaKnown RBP21.16■□□□□ 0.98
LINC01556-201ENST00000377186 CCDC88BA6NC98 1476 aa21.08■□□□□ 0.97
LINC01556-201ENST00000377186 BAZ1BQ9UIG0 1483 aaKnown RBP21.07■□□□□ 0.96
LINC01556-201ENST00000377186 HMGXB3Q12766 1538 aa20.99■□□□□ 0.95
LINC01556-201ENST00000377186 NCAPD3P42695 1498 aa20.98■□□□□ 0.95
LINC01556-201ENST00000377186 CC2D2AQ9P2K1 1620 aa20.81■□□□□ 0.92
LINC01556-201ENST00000377186 TRIM41Q8WV44 630 aa20.77■□□□□ 0.92
LINC01556-201ENST00000377186 ABCC8Q09428 1581 aa20.68■□□□□ 0.9
LINC01556-201ENST00000377186 CFTRP13569 1480 aa20.55■□□□□ 0.88
LINC01556-201ENST00000377186 WRNQ14191 1432 aaPredicted RBP eCLIP20.54■□□□□ 0.88
LINC01556-201ENST00000377186 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
LINC01556-201ENST00000377186 PRDM2Q13029 1718 aa20.44■□□□□ 0.86
LINC01556-201ENST00000377186 CADPSQ9ULU8 1353 aa20.44■□□□□ 0.86
LINC01556-201ENST00000377186 LOC105371045A0A1W2PR82 267 aa20.39■□□□□ 0.85
LINC01556-201ENST00000377186 FAM9AQ8IZU1 332 aaPredicted RBP20.39■□□□□ 0.85
LINC01556-201ENST00000377186 TOP2BQ02880 1626 aa20.37■□□□□ 0.85
LINC01556-201ENST00000377186 BIVM-ERCC5R4GMW8 1640 aa20.35■□□□□ 0.85
LINC01556-201ENST00000377186 EEA1Q15075 1411 aa20.32■□□□□ 0.84
LINC01556-201ENST00000377186 SOGA1O94964 1423 aa20.3■□□□□ 0.84
LINC01556-201ENST00000377186 CUX1P39880 1505 aa20.3■□□□□ 0.84
LINC01556-201ENST00000377186 LAMC3Q9Y6N6 1575 aa20.25■□□□□ 0.83
LINC01556-201ENST00000377186 FANCD2Q9BXW9 1451 aa20.23■□□□□ 0.83
LINC01556-201ENST00000377186 NESP48681 1621 aa20.22■□□□□ 0.83
LINC01556-201ENST00000377186 RUSC2Q8N2Y8 1516 aa20.22■□□□□ 0.83
LINC01556-201ENST00000377186 DNAJC5BQ9UF47 199 aa20.21■□□□□ 0.83
LINC01556-201ENST00000377186 CSRNP3Q8WYN3 585 aa20.14■□□□□ 0.81
LINC01556-201ENST00000377186 CEP164Q9UPV0 1460 aa20.1■□□□□ 0.81
LINC01556-201ENST00000377186 DNMBPQ6XZF7 1577 aa20.08■□□□□ 0.81
LINC01556-201ENST00000377186 EHMT2Q96KQ7 1210 aa20.07■□□□□ 0.8
LINC01556-201ENST00000377186 PDS5BQ9NTI5 1447 aa20.07■□□□□ 0.8
LINC01556-201ENST00000377186 KIF21BO75037 1637 aa20.06■□□□□ 0.8
LINC01556-201ENST00000377186 FGD5Q6ZNL6 1462 aa20.05■□□□□ 0.8
LINC01556-201ENST00000377186 GOLGA3Q08378 1498 aa20.05■□□□□ 0.8
LINC01556-201ENST00000377186 TOPBP1Q92547 1522 aa20.03■□□□□ 0.8
LINC01556-201ENST00000377186 KIF27Q86VH2 1401 aa20.01■□□□□ 0.79
LINC01556-201ENST00000377186 TNIKQ9UKE5 1360 aa19.99■□□□□ 0.79
LINC01556-201ENST00000377186 URB2Q14146 1524 aaKnown RBP19.98■□□□□ 0.79
LINC01556-201ENST00000377186 KIF21AQ7Z4S6 1674 aa19.97■□□□□ 0.79
LINC01556-201ENST00000377186 CUX2O14529 1486 aa19.94■□□□□ 0.78
LINC01556-201ENST00000377186 POLA1P09884 1462 aaPredicted RBP19.93■□□□□ 0.78
LINC01556-201ENST00000377186 PRXQ9BXM0 1461 aa19.92■□□□□ 0.78
LINC01556-201ENST00000377186 ERICH3Q5RHP9 1530 aa19.91■□□□□ 0.78
LINC01556-201ENST00000377186 CEP162Q5TB80 1403 aa19.9■□□□□ 0.78
LINC01556-201ENST00000377186 RAPGEF2Q9Y4G8 1499 aa19.9■□□□□ 0.78
LINC01556-201ENST00000377186 ABCA10Q8WWZ4 1543 aa19.88■□□□□ 0.77
LINC01556-201ENST00000377186 UBTFP17480 764 aaKnown RBP19.87■□□□□ 0.77
LINC01556-201ENST00000377186 RAD54L2Q9Y4B4 1467 aa19.86■□□□□ 0.77
LINC01556-201ENST00000377186 MRC2Q9UBG0 1479 aa19.85■□□□□ 0.77
LINC01556-201ENST00000377186 WDR97A6NE52 1622 aa19.82■□□□□ 0.76
LINC01556-201ENST00000377186 IGF1RP08069 1367 aa19.81■□□□□ 0.76
LINC01556-201ENST00000377186 WDR62O43379 1518 aa19.74■□□□□ 0.75
LINC01556-201ENST00000377186 ABCA5Q8WWZ7 1642 aa19.73■□□□□ 0.75
LINC01556-201ENST00000377186 CLIP1P30622 1438 aa19.72■□□□□ 0.75
LINC01556-201ENST00000377186 TARBP1Q13395 1621 aaKnown RBP19.72■□□□□ 0.75
LINC01556-201ENST00000377186 CARMIL1Q5VZK9 1371 aa19.71■□□□□ 0.75
LINC01556-201ENST00000377186 ERCC6Q03468 1493 aa19.7■□□□□ 0.74
LINC01556-201ENST00000377186 CUL7Q14999 1698 aa19.67■□□□□ 0.74
LINC01556-201ENST00000377186 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
LINC01556-201ENST00000377186 GAPVD1Q14C86 1478 aa19.65■□□□□ 0.74
LINC01556-201ENST00000377186 TDRD9Q8NDG6 1382 aaKnown RBP19.63■□□□□ 0.73
LINC01556-201ENST00000377186 IFT140Q96RY7 1462 aa19.61■□□□□ 0.73
LINC01556-201ENST00000377186 TRIM26Q12899 539 aaPredicted RBP19.57■□□□□ 0.72
LINC01556-201ENST00000377186 PCGF6Q9BYE7 350 aa19.57■□□□□ 0.72
LINC01556-201ENST00000377186 VPS8Q8N3P4 1428 aa19.57■□□□□ 0.72
LINC01556-201ENST00000377186 ARAP1Q96P48 1450 aa19.54■□□□□ 0.72
LINC01556-201ENST00000377186 PBRM1Q86U86 1689 aa19.53■□□□□ 0.72
LINC01556-201ENST00000377186 AQRO60306 1485 aaKnown RBP eCLIP19.5■□□□□ 0.71
LINC01556-201ENST00000377186 ARHGAP35Q9NRY4 1499 aa19.49■□□□□ 0.71
LINC01556-201ENST00000377186 RANGAP1P46060 587 aaPredicted RBP19.49■□□□□ 0.71
LINC01556-201ENST00000377186 GRIN2BQ13224 1484 aa19.48■□□□□ 0.71
LINC01556-201ENST00000377186 ZNF608Q9ULD9 1512 aaPredicted RBP19.48■□□□□ 0.71
LINC01556-201ENST00000377186 ADAMTS12P58397 1594 aa19.47■□□□□ 0.71
LINC01556-201ENST00000377186 FHAD1B1AJZ9 1412 aa19.45■□□□□ 0.7
LINC01556-201ENST00000377186 CTTNBP2Q8WZ74 1663 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms