RNA–Protein interactions for RNA: ENST00000319294.10

UBASH3A-202, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best) BASIC

Gene UBASH3A, Length 2,504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-202ENST00000319294 NISCHQ9Y2I1 1504 aa26.63■■□□□ 1.85
UBASH3A-202ENST00000319294 CCDC180Q9P1Z9 1646 aa22.79■■□□□ 1.24
UBASH3A-202ENST00000319294 ZCCHC6Q5VYS8 1495 aaKnown RBP22.45■■□□□ 1.18
UBASH3A-202ENST00000319294 SHROOM4Q9ULL8 1493 aa22.42■■□□□ 1.18
UBASH3A-202ENST00000319294 DCAF8L2P0C7V8 631 aa22.14■■□□□ 1.14
UBASH3A-202ENST00000319294 DCAF1Q9Y4B6 1507 aa21.85■■□□□ 1.09
UBASH3A-202ENST00000319294 SUPT5HO00267 1087 aaKnown RBP21.82■■□□□ 1.08
UBASH3A-202ENST00000319294 ABCC9O60706 1549 aa21.41■■□□□ 1.02
UBASH3A-202ENST00000319294 MYO15BQ96JP2 1530 aa21.35■■□□□ 1.01
UBASH3A-202ENST00000319294 SCRIBQ14160 1630 aa21.3■■□□□ 1
UBASH3A-202ENST00000319294 NACADO15069 1562 aa21.15■□□□□ 0.98
UBASH3A-202ENST00000319294 CHIC1Q5VXU3 224 aa21.08■□□□□ 0.97
UBASH3A-202ENST00000319294 RSF1Q96T23 1441 aaPredicted RBP20.95■□□□□ 0.94
UBASH3A-202ENST00000319294 RB1CC1Q8TDY2 1594 aa20.87■□□□□ 0.93
UBASH3A-202ENST00000319294 CECR2Q9BXF3 1484 aa20.82■□□□□ 0.92
UBASH3A-202ENST00000319294 MROH2BQ7Z745 1585 aa20.7■□□□□ 0.9
UBASH3A-202ENST00000319294 UNC13AQ9UPW8 1703 aa20.58■□□□□ 0.89
UBASH3A-202ENST00000319294 WIZO95785 1651 aa20.56■□□□□ 0.88
UBASH3A-202ENST00000319294 BAZ1AQ9NRL2 1556 aaPredicted RBP20.45■□□□□ 0.87
UBASH3A-202ENST00000319294 LOC105371045A0A1W2PR82 267 aa20.45■□□□□ 0.86
UBASH3A-202ENST00000319294 PABPN1Q86U42 306 aaKnown RBP eCLIP20.42■□□□□ 0.86
UBASH3A-202ENST00000319294 BICRAQ9NZM4 1560 aa20.36■□□□□ 0.85
UBASH3A-202ENST00000319294 SMARCA4P51532 1647 aa20.34■□□□□ 0.85
UBASH3A-202ENST00000319294 TRIM41Q8WV44 630 aa20.34■□□□□ 0.85
UBASH3A-202ENST00000319294 TOP2AP11388 1531 aaKnown RBP20.21■□□□□ 0.83
UBASH3A-202ENST00000319294 FAM9AQ8IZU1 332 aaPredicted RBP20.17■□□□□ 0.82
UBASH3A-202ENST00000319294 CCDC88BA6NC98 1476 aa20.14■□□□□ 0.82
UBASH3A-202ENST00000319294 EIF4G1Q04637 1599 aaKnown RBP20.14■□□□□ 0.81
UBASH3A-202ENST00000319294 SMARCA2P51531 1590 aa20.11■□□□□ 0.81
UBASH3A-202ENST00000319294 PCGF6Q9BYE7 350 aa20.03■□□□□ 0.8
UBASH3A-202ENST00000319294 HRCP23327 699 aa20.01■□□□□ 0.79
UBASH3A-202ENST00000319294 EHMT2Q96KQ7 1210 aa20.01■□□□□ 0.79
UBASH3A-202ENST00000319294 PEG3Q9GZU2 1588 aa19.98■□□□□ 0.79
UBASH3A-202ENST00000319294 ABCC8Q09428 1581 aa19.96■□□□□ 0.79
UBASH3A-202ENST00000319294 ATAD2BQ9ULI0 1458 aa19.92■□□□□ 0.78
UBASH3A-202ENST00000319294 BAZ1BQ9UIG0 1483 aaKnown RBP19.82■□□□□ 0.76
UBASH3A-202ENST00000319294 TRIM26Q12899 539 aaPredicted RBP19.72■□□□□ 0.75
UBASH3A-202ENST00000319294 SOGA1O94964 1423 aa19.72■□□□□ 0.75
UBASH3A-202ENST00000319294 PPARGC1BQ86YN6 1023 aaKnown RBP19.68■□□□□ 0.74
UBASH3A-202ENST00000319294 RUSC2Q8N2Y8 1516 aa19.66■□□□□ 0.74
UBASH3A-202ENST00000319294 WRNQ14191 1432 aaPredicted RBP eCLIP19.66■□□□□ 0.74
UBASH3A-202ENST00000319294 SYNJ1O43426 1573 aa19.6■□□□□ 0.73
UBASH3A-202ENST00000319294 NCAPD3P42695 1498 aa19.59■□□□□ 0.73
UBASH3A-202ENST00000319294 CSRNP3Q8WYN3 585 aa19.56■□□□□ 0.72
UBASH3A-202ENST00000319294 HMGXB3Q12766 1538 aa19.54■□□□□ 0.72
UBASH3A-202ENST00000319294 EEA1Q15075 1411 aa19.51■□□□□ 0.71
UBASH3A-202ENST00000319294 TNIKQ9UKE5 1360 aa19.44■□□□□ 0.7
UBASH3A-202ENST00000319294 CEP162Q5TB80 1403 aa19.43■□□□□ 0.7
UBASH3A-202ENST00000319294 UBTFP17480 764 aaKnown RBP19.43■□□□□ 0.7
UBASH3A-202ENST00000319294 TOP2BQ02880 1626 aa19.37■□□□□ 0.69
UBASH3A-202ENST00000319294 GOLGA3Q08378 1498 aa19.37■□□□□ 0.69
UBASH3A-202ENST00000319294 CFTRP13569 1480 aa19.34■□□□□ 0.69
UBASH3A-202ENST00000319294 BIVM-ERCC5R4GMW8 1640 aa19.31■□□□□ 0.68
UBASH3A-202ENST00000319294 CEP164Q9UPV0 1460 aa19.3■□□□□ 0.68
UBASH3A-202ENST00000319294 CUX1P39880 1505 aa19.28■□□□□ 0.68
UBASH3A-202ENST00000319294 CC2D2AQ9P2K1 1620 aa19.28■□□□□ 0.68
UBASH3A-202ENST00000319294 KIF21BO75037 1637 aa19.28■□□□□ 0.68
UBASH3A-202ENST00000319294 TTBK1Q5TCY1 1321 aaPredicted RBP19.26■□□□□ 0.67
UBASH3A-202ENST00000319294 RAPGEF2Q9Y4G8 1499 aa19.24■□□□□ 0.67
UBASH3A-202ENST00000319294 CADPSQ9ULU8 1353 aa19.19■□□□□ 0.66
UBASH3A-202ENST00000319294 CLIP1P30622 1438 aa19.15■□□□□ 0.66
UBASH3A-202ENST00000319294 RANGAP1P46060 587 aaPredicted RBP19.14■□□□□ 0.65
UBASH3A-202ENST00000319294 PRDM2Q13029 1718 aa19.13■□□□□ 0.65
UBASH3A-202ENST00000319294 PRXQ9BXM0 1461 aa19.1■□□□□ 0.65
UBASH3A-202ENST00000319294 ZEB1P37275 1124 aaPredicted RBP19.08■□□□□ 0.65
UBASH3A-202ENST00000319294 KIF27Q86VH2 1401 aa19.07■□□□□ 0.64
UBASH3A-202ENST00000319294 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.03■□□□□ 0.64
UBASH3A-202ENST00000319294 ERICH3Q5RHP9 1530 aa19.03■□□□□ 0.64
UBASH3A-202ENST00000319294 VPS8Q8N3P4 1428 aa19.02■□□□□ 0.63
UBASH3A-202ENST00000319294 NESP48681 1621 aa19■□□□□ 0.63
UBASH3A-202ENST00000319294 FANCD2Q9BXW9 1451 aa18.99■□□□□ 0.63
UBASH3A-202ENST00000319294 FGD5Q6ZNL6 1462 aa18.98■□□□□ 0.63
UBASH3A-202ENST00000319294 CUX2O14529 1486 aa18.98■□□□□ 0.63
UBASH3A-202ENST00000319294 DNAJC5BQ9UF47 199 aa18.97■□□□□ 0.63
UBASH3A-202ENST00000319294 PELP1Q8IZL8 1130 aaKnown RBP18.96■□□□□ 0.63
UBASH3A-202ENST00000319294 IGF1RP08069 1367 aa18.94■□□□□ 0.62
UBASH3A-202ENST00000319294 CCER1Q8TC90 406 aaPredicted RBP18.92■□□□□ 0.62
UBASH3A-202ENST00000319294 ARAP1Q96P48 1450 aa18.9■□□□□ 0.62
UBASH3A-202ENST00000319294 SCAF1Q9H7N4 1312 aaKnown RBP18.88■□□□□ 0.61
UBASH3A-202ENST00000319294 APLP2Q06481 763 aa18.87■□□□□ 0.61
UBASH3A-202ENST00000319294 RAD54L2Q9Y4B4 1467 aa18.85■□□□□ 0.61
UBASH3A-202ENST00000319294 DNMBPQ6XZF7 1577 aa18.84■□□□□ 0.61
UBASH3A-202ENST00000319294 TOPBP1Q92547 1522 aa18.84■□□□□ 0.61
UBASH3A-202ENST00000319294 CARMIL1Q5VZK9 1371 aa18.84■□□□□ 0.61
UBASH3A-202ENST00000319294 POLA1P09884 1462 aaPredicted RBP18.81■□□□□ 0.6
UBASH3A-202ENST00000319294 ARHGAP35Q9NRY4 1499 aa18.8■□□□□ 0.6
UBASH3A-202ENST00000319294 HNRNPUL2Q1KMD3 747 aaKnown RBP18.79■□□□□ 0.6
UBASH3A-202ENST00000319294 LAMC3Q9Y6N6 1575 aa18.78■□□□□ 0.6
UBASH3A-202ENST00000319294 KANK4Q5T7N3 995 aaPredicted RBP18.77■□□□□ 0.6
UBASH3A-202ENST00000319294 URB2Q14146 1524 aaKnown RBP18.76■□□□□ 0.59
UBASH3A-202ENST00000319294 ABCA10Q8WWZ4 1543 aa18.75■□□□□ 0.59
UBASH3A-202ENST00000319294 PDS5BQ9NTI5 1447 aa18.67■□□□□ 0.58
UBASH3A-202ENST00000319294 KIF21AQ7Z4S6 1674 aa18.65■□□□□ 0.58
UBASH3A-202ENST00000319294 TDRD9Q8NDG6 1382 aaKnown RBP18.64■□□□□ 0.57
UBASH3A-202ENST00000319294 P3H3Q8IVL6 736 aa18.63■□□□□ 0.57
UBASH3A-202ENST00000319294 WDR97A6NE52 1622 aa18.61■□□□□ 0.57
UBASH3A-202ENST00000319294 CUL7Q14999 1698 aa18.56■□□□□ 0.56
UBASH3A-202ENST00000319294 ABCA5Q8WWZ7 1642 aa18.55■□□□□ 0.56
UBASH3A-202ENST00000319294 GAPVD1Q14C86 1478 aa18.54■□□□□ 0.56
UBASH3A-202ENST00000319294 FHOD3Q2V2M9 1422 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 203.2 ms