RNA–Protein interactions for RNA: ENST00000455711.1

LINC01056-201, Transcript of long intergenic non-protein coding RNA 1056, humanhuman

TSL 1 (best) BASIC

Gene LINC01056, Length 1,234 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01056-201ENST00000455711 NISCHQ9Y2I1 1504 aa32.8■■■□□ 2.84
LINC01056-201ENST00000455711 ABCC9O60706 1549 aa30.57■■■□□ 2.49
LINC01056-201ENST00000455711 CCDC180Q9P1Z9 1646 aa29.67■■■□□ 2.34
LINC01056-201ENST00000455711 DNAJC5BQ9UF47 199 aa29.39■■■□□ 2.3
LINC01056-201ENST00000455711 RB1CC1Q8TDY2 1594 aa28.66■■■□□ 2.18
LINC01056-201ENST00000455711 PABPN1Q86U42 306 aaKnown RBP eCLIP28.38■■■□□ 2.13
LINC01056-201ENST00000455711 NACADO15069 1562 aa28.26■■■□□ 2.11
LINC01056-201ENST00000455711 DCAF8L2P0C7V8 631 aa28.11■■■□□ 2.09
LINC01056-201ENST00000455711 UNC13AQ9UPW8 1703 aa27.99■■■□□ 2.07
LINC01056-201ENST00000455711 BICRAQ9NZM4 1560 aa27.9■■■□□ 2.06
LINC01056-201ENST00000455711 CECR2Q9BXF3 1484 aa27.59■■■□□ 2.01
LINC01056-201ENST00000455711 MYO15BQ96JP2 1530 aa27.58■■■□□ 2.01
LINC01056-201ENST00000455711 CC2D2AQ9P2K1 1620 aa27.52■■■□□ 2
LINC01056-201ENST00000455711 DNAJC5Q9H3Z4 198 aa27.45■■□□□ 1.98
LINC01056-201ENST00000455711 SHROOM4Q9ULL8 1493 aa27.35■■□□□ 1.97
LINC01056-201ENST00000455711 EIF4G1Q04637 1599 aaKnown RBP27.27■■□□□ 1.96
LINC01056-201ENST00000455711 SCRIBQ14160 1630 aa27.12■■□□□ 1.93
LINC01056-201ENST00000455711 ZCCHC6Q5VYS8 1495 aaKnown RBP27.03■■□□□ 1.92
LINC01056-201ENST00000455711 DCAF1Q9Y4B6 1507 aa26.97■■□□□ 1.91
LINC01056-201ENST00000455711 CUX2O14529 1486 aa26.57■■□□□ 1.84
LINC01056-201ENST00000455711 ERCC6Q03468 1493 aa26.42■■□□□ 1.82
LINC01056-201ENST00000455711 NCAPD3P42695 1498 aa26.13■■□□□ 1.77
LINC01056-201ENST00000455711 NESP48681 1621 aa26.06■■□□□ 1.76
LINC01056-201ENST00000455711 TRIM41Q8WV44 630 aa26.03■■□□□ 1.76
LINC01056-201ENST00000455711 ATAD2BQ9ULI0 1458 aa25.98■■□□□ 1.75
LINC01056-201ENST00000455711 THOC2Q8NI27 1593 aaKnown RBP25.88■■□□□ 1.73
LINC01056-201ENST00000455711 HMGXB3Q12766 1538 aa25.85■■□□□ 1.73
LINC01056-201ENST00000455711 SMARCA2P51531 1590 aa25.82■■□□□ 1.72
LINC01056-201ENST00000455711 SMARCA4P51532 1647 aa25.74■■□□□ 1.71
LINC01056-201ENST00000455711 BAZ1BQ9UIG0 1483 aaKnown RBP25.69■■□□□ 1.7
LINC01056-201ENST00000455711 LAMC3Q9Y6N6 1575 aa25.63■■□□□ 1.69
LINC01056-201ENST00000455711 KIF21AQ7Z4S6 1674 aa25.62■■□□□ 1.69
LINC01056-201ENST00000455711 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
LINC01056-201ENST00000455711 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
LINC01056-201ENST00000455711 PEG3Q9GZU2 1588 aa25.45■■□□□ 1.66
LINC01056-201ENST00000455711 MRC2Q9UBG0 1479 aa25.4■■□□□ 1.66
LINC01056-201ENST00000455711 WDR62O43379 1518 aa25.34■■□□□ 1.65
LINC01056-201ENST00000455711 CADPSQ9ULU8 1353 aa25.32■■□□□ 1.64
LINC01056-201ENST00000455711 MROH2BQ7Z745 1585 aa25.31■■□□□ 1.64
LINC01056-201ENST00000455711 OSCARQ8IYS5 282 aa25.25■■□□□ 1.63
LINC01056-201ENST00000455711 CEP164Q9UPV0 1460 aa25.15■■□□□ 1.62
LINC01056-201ENST00000455711 FANCD2Q9BXW9 1451 aa25.06■■□□□ 1.6
LINC01056-201ENST00000455711 RIMBP3CA6NJZ7 1639 aa25.02■■□□□ 1.6
LINC01056-201ENST00000455711 RIMBP3BA6NNM3 1639 aa25.02■■□□□ 1.6
LINC01056-201ENST00000455711 RIMBP3Q9UFD9 1639 aa25.02■■□□□ 1.6
LINC01056-201ENST00000455711 WIZO95785 1651 aa24.94■■□□□ 1.58
LINC01056-201ENST00000455711 URB2Q14146 1524 aaKnown RBP24.92■■□□□ 1.58
LINC01056-201ENST00000455711 ARHGEF11O15085 1522 aa24.88■■□□□ 1.57
LINC01056-201ENST00000455711 CFTRP13569 1480 aa24.87■■□□□ 1.57
LINC01056-201ENST00000455711 CYB5RLQ6IPT4 315 aa24.78■■□□□ 1.56
LINC01056-201ENST00000455711 ZNF608Q9ULD9 1512 aaPredicted RBP24.76■■□□□ 1.55
LINC01056-201ENST00000455711 TRHP20396 242 aaPredicted RBP24.75■■□□□ 1.55
LINC01056-201ENST00000455711 IFT140Q96RY7 1462 aa24.65■■□□□ 1.54
LINC01056-201ENST00000455711 ARAP1Q96P48 1450 aa24.61■■□□□ 1.53
LINC01056-201ENST00000455711 AEBP2Q6ZN18 517 aaPredicted RBP24.56■■□□□ 1.52
LINC01056-201ENST00000455711 TOP2AP11388 1531 aaKnown RBP24.56■■□□□ 1.52
LINC01056-201ENST00000455711 EIF4G3O43432 1585 aaKnown RBP24.54■■□□□ 1.52
LINC01056-201ENST00000455711 RSF1Q96T23 1441 aaPredicted RBP24.5■■□□□ 1.51
LINC01056-201ENST00000455711 TOPBP1Q92547 1522 aa24.5■■□□□ 1.51
LINC01056-201ENST00000455711 CHD1O14646 1710 aa24.47■■□□□ 1.51
LINC01056-201ENST00000455711 PRDM2Q13029 1718 aa24.46■■□□□ 1.51
LINC01056-201ENST00000455711 FBLN2P98095 1184 aa24.45■■□□□ 1.5
LINC01056-201ENST00000455711 AQRO60306 1485 aaKnown RBP eCLIP24.44■■□□□ 1.5
LINC01056-201ENST00000455711 CCDC88BA6NC98 1476 aa24.32■■□□□ 1.48
LINC01056-201ENST00000455711 TARBP1Q13395 1621 aaKnown RBP24.32■■□□□ 1.48
LINC01056-201ENST00000455711 DNMBPQ6XZF7 1577 aa24.31■■□□□ 1.48
LINC01056-201ENST00000455711 ABCC8Q09428 1581 aa24.3■■□□□ 1.48
LINC01056-201ENST00000455711 POLA1P09884 1462 aaPredicted RBP24.21■■□□□ 1.47
LINC01056-201ENST00000455711 CLASP1Q7Z460 1538 aa24.19■■□□□ 1.46
LINC01056-201ENST00000455711 RAD54L2Q9Y4B4 1467 aa24.18■■□□□ 1.46
LINC01056-201ENST00000455711 TDRD9Q8NDG6 1382 aaKnown RBP24.17■■□□□ 1.46
LINC01056-201ENST00000455711 SNAPC4Q5SXM2 1469 aa24.15■■□□□ 1.46
LINC01056-201ENST00000455711 CHMP7Q8WUX9 453 aaPredicted RBP24.09■■□□□ 1.45
LINC01056-201ENST00000455711 SYNJ1O43426 1573 aa24.08■■□□□ 1.44
LINC01056-201ENST00000455711 SOGA1O94964 1423 aa24.07■■□□□ 1.44
LINC01056-201ENST00000455711 GAPVD1Q14C86 1478 aa24.01■■□□□ 1.43
LINC01056-201ENST00000455711 MAGI1Q96QZ7 1491 aaPredicted RBP24■■□□□ 1.43
LINC01056-201ENST00000455711 FGD5Q6ZNL6 1462 aa23.95■■□□□ 1.42
LINC01056-201ENST00000455711 SYNJ2O15056 1496 aa23.94■■□□□ 1.42
LINC01056-201ENST00000455711 GRIN2BQ13224 1484 aa23.94■■□□□ 1.42
LINC01056-201ENST00000455711 WDR97A6NE52 1622 aa23.92■■□□□ 1.42
LINC01056-201ENST00000455711 ERCC6L2Q5T890 1561 aa23.82■■□□□ 1.4
LINC01056-201ENST00000455711 CUX1P39880 1505 aa23.82■■□□□ 1.4
LINC01056-201ENST00000455711 PBRM1Q86U86 1689 aa23.76■■□□□ 1.39
LINC01056-201ENST00000455711 CEP170Q5SW79 1584 aa23.66■■□□□ 1.38
LINC01056-201ENST00000455711 GRIN2AQ12879 1464 aa23.64■■□□□ 1.38
LINC01056-201ENST00000455711 KIF13AQ9H1H9 1805 aa23.63■■□□□ 1.37
LINC01056-201ENST00000455711 ABCA5Q8WWZ7 1642 aa23.63■■□□□ 1.37
LINC01056-201ENST00000455711 ILDR1Q86SU0 546 aaPredicted RBP23.62■■□□□ 1.37
LINC01056-201ENST00000455711 ABCA10Q8WWZ4 1543 aa23.6■■□□□ 1.37
LINC01056-201ENST00000455711 NUP160Q12769 1436 aa23.59■■□□□ 1.37
LINC01056-201ENST00000455711 ADAMTS12P58397 1594 aa23.53■■□□□ 1.36
LINC01056-201ENST00000455711 KDM4FA0A1W2PPD8 638 aa23.53■■□□□ 1.36
LINC01056-201ENST00000455711 SHROOM2Q13796 1616 aa23.52■■□□□ 1.36
LINC01056-201ENST00000455711 FAM69CQ0P6D2 419 aa23.51■■□□□ 1.35
LINC01056-201ENST00000455711 ABCC10Q5T3U5 1492 aa23.45■■□□□ 1.34
LINC01056-201ENST00000455711 PRG4Q92954 1404 aaPredicted RBP23.45■■□□□ 1.34
LINC01056-201ENST00000455711 FHAD1B1AJZ9 1412 aa23.42■■□□□ 1.34
LINC01056-201ENST00000455711 DIP2BQ9P265 1576 aa23.37■■□□□ 1.33
LINC01056-201ENST00000455711 WRNQ14191 1432 aaPredicted RBP eCLIP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms