Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 ARHGDIA-211ENST00000582984 823 ntTSL 325.96■■□□□ 1.752e-10■■■■■ 30.9
XRN2Q9H0D6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.03■■□□□ 1.282e-10■■■■■ 30.9
XRN2Q9H0D6 ARHGDIA-212ENST00000583111 574 ntTSL 222.83■■□□□ 1.252e-10■■■■■ 30.9
XRN2Q9H0D6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.952e-10■■■■■ 30.9
XRN2Q9H0D6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.44■□□□□ 0.862e-10■■■■■ 30.9
XRN2Q9H0D6 ARHGDIA-206ENST00000580033 547 ntTSL 420.38■□□□□ 0.852e-10■■■■■ 30.9
XRN2Q9H0D6 ARHGDIA-215ENST00000583868 815 ntTSL 316.53■□□□□ 0.242e-10■■■■■ 30.9
XRN2Q9H0D6 ARHGDIA-204ENST00000578351 421 ntTSL 413.96□□□□□ -0.172e-10■■■■■ 30.9
XRN2Q9H0D6 AC022098.1-201ENST00000588387 2861 ntTSL 1 (best) BASIC13.47□□□□□ -0.256e-6■■■■■ 30.8
XRN2Q9H0D6 AC022098.1-203ENST00000592086 449 ntTSL 312.65□□□□□ -0.386e-6■■■■■ 30.8
XRN2Q9H0D6 ZBTB20-218ENST00000488663 1495 ntTSL 1 (best)5.23□□□□□ -1.573e-6■■■■■ 30.8
XRN2Q9H0D6 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.883e-6■■■■■ 30.8
XRN2Q9H0D6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.65■□□□□ 0.93e-11■■■■■ 30.8
XRN2Q9H0D6 INS-IGF2-201ENST00000356578 1706 ntTSL 519.81■□□□□ 0.763e-11■■■■■ 30.8
XRN2Q9H0D6 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.193e-11■■■■■ 30.8
XRN2Q9H0D6 INS-IGF2-205ENST00000641326 2861 ntAPPRIS P1 BASIC11.98□□□□□ -0.493e-11■■■■■ 30.8
XRN2Q9H0D6 FSCN1-204ENST00000447103 713 ntTSL 423.5■■□□□ 1.351e-8■■■■■ 30.8
XRN2Q9H0D6 FSCN1-202ENST00000405801 550 ntTSL 422.34■■□□□ 1.171e-8■■■■■ 30.8
XRN2Q9H0D6 RPL13-208ENST00000487034 615 ntTSL 1 (best)26.8■■□□□ 1.881e-13■■■■■ 30.7
XRN2Q9H0D6 RPL13-209ENST00000491523 698 ntTSL 326.3■■□□□ 1.81e-13■■■■■ 30.7
XRN2Q9H0D6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.161e-13■■■■■ 30.7
XRN2Q9H0D6 RPL13-212ENST00000563749 2367 nt22.21■■□□□ 1.151e-13■■■■■ 30.7
XRN2Q9H0D6 RPL13-205ENST00000467736 528 ntTSL 319.94■□□□□ 0.781e-13■■■■■ 30.7
XRN2Q9H0D6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.681e-13■■■■■ 30.7
XRN2Q9H0D6 RPL13-210ENST00000562879 958 ntTSL 1 (best)18.01■□□□□ 0.471e-13■■■■■ 30.7
XRN2Q9H0D6 RPL13-207ENST00000484610 924 ntTSL 517.47■□□□□ 0.391e-13■■■■■ 30.7
XRN2Q9H0D6 RPL13-213ENST00000565571 568 ntTSL 217.33■□□□□ 0.361e-13■■■■■ 30.7
XRN2Q9H0D6 RPL13-211ENST00000563270 554 ntTSL 417.33■□□□□ 0.361e-13■■■■■ 30.7
XRN2Q9H0D6 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.31■□□□□ 0.21e-13■■■■■ 30.7
XRN2Q9H0D6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.4■■□□□ 1.184e-7■■■■■ 30.7
XRN2Q9H0D6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.66■□□□□ 0.584e-7■■■■■ 30.7
XRN2Q9H0D6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.42■□□□□ 0.384e-7■■■■■ 30.7
XRN2Q9H0D6 RTN4-211ENST00000438462 656 ntTSL 515.01□□□□□ -0.014e-7■■■■■ 30.7
XRN2Q9H0D6 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.75□□□□□ -0.214e-7■■■■■ 30.7
XRN2Q9H0D6 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC8.58□□□□□ -1.044e-7■■■■■ 30.7
XRN2Q9H0D6 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.03□□□□□ -1.764e-7■■■■■ 30.7
XRN2Q9H0D6 AC087482.1-202ENST00000558071 903 ntTSL 5 BASIC12.1□□□□□ -0.473e-7■■■■■ 30.7
XRN2Q9H0D6 CASP2-202ENST00000350623 1146 ntTSL 1 (best)16.63■□□□□ 0.254e-17■■■■■ 30.7
XRN2Q9H0D6 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.154e-17■■■■■ 30.7
XRN2Q9H0D6 CASP2-203ENST00000392925 616 ntTSL 3 BASIC15.57■□□□□ 0.084e-17■■■■■ 30.7
XRN2Q9H0D6 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.79□□□□□ -0.044e-17■■■■■ 30.7
XRN2Q9H0D6 RELA-211ENST00000527749 771 ntTSL 531.99■■■□□ 2.711e-14■■■■■ 30.6
XRN2Q9H0D6 RELA-223ENST00000534283 575 ntTSL 529.39■■■□□ 2.31e-14■■■■■ 30.6
XRN2Q9H0D6 ORAOV1-204ENST00000535542 951 ntTSL 324.94■■□□□ 1.586e-10■■■■■ 30.6
XRN2Q9H0D6 RELA-221ENST00000533187 456 ntTSL 322.92■■□□□ 1.261e-14■■■■■ 30.6
XRN2Q9H0D6 ORAOV1-214ENST00000543023 845 ntTSL 322.27■■□□□ 1.166e-10■■■■■ 30.6
XRN2Q9H0D6 NUP210-202ENST00000420141 3134 ntTSL 1 (best)22.16■■□□□ 1.144e-8■■■■■ 30.6
XRN2Q9H0D6 PIEZO1-206ENST00000474606 544 ntTSL 421.81■■□□□ 1.086e-10■■■■■ 30.6
XRN2Q9H0D6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.016e-10■■■■■ 30.6
XRN2Q9H0D6 PIEZO1-215ENST00000566414 564 ntTSL 421.22■□□□□ 0.996e-10■■■■■ 30.6
XRN2Q9H0D6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.998e-8■■■■■ 30.6
XRN2Q9H0D6 RELA-224ENST00000534305 666 ntTSL 320.9■□□□□ 0.941e-14■■■■■ 30.6
XRN2Q9H0D6 RELA-215ENST00000529389 992 ntTSL 320.72■□□□□ 0.911e-14■■■■■ 30.6
XRN2Q9H0D6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.886e-7■■■■■ 30.6
XRN2Q9H0D6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.881e-14■■■■■ 30.6
XRN2Q9H0D6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.81e-14■■■■■ 30.6
XRN2Q9H0D6 FAM135A-216ENST00000515323 1926 ntTSL 520.04■□□□□ 0.86e-10■■■■■ 30.6
XRN2Q9H0D6 PANK4-210ENST00000505228 1913 ntTSL 519.82■□□□□ 0.766e-10■■■■■ 30.6
XRN2Q9H0D6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.726e-7■■■■■ 30.6
XRN2Q9H0D6 RELA-218ENST00000532776 602 ntTSL 219.56■□□□□ 0.721e-14■■■■■ 30.6
XRN2Q9H0D6 CCDC130-205ENST00000586666 914 ntTSL 319.51■□□□□ 0.718e-8■■■■■ 30.6
XRN2Q9H0D6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.25■□□□□ 0.671e-14■■■■■ 30.6
XRN2Q9H0D6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.651e-9■■■■■ 30.6
XRN2Q9H0D6 RELA-216ENST00000531238 541 ntTSL 419.04■□□□□ 0.641e-14■■■■■ 30.6
XRN2Q9H0D6 RELA-213ENST00000527909 591 ntTSL 519.04■□□□□ 0.641e-14■■■■■ 30.6
XRN2Q9H0D6 RELA-222ENST00000533546 569 ntTSL 419.04■□□□□ 0.641e-14■■■■■ 30.6
XRN2Q9H0D6 FGFR3-206ENST00000469068 821 ntTSL 318.92■□□□□ 0.626e-10■■■■■ 30.6
XRN2Q9H0D6 ORAOV1-215ENST00000543562 444 ntTSL 1 (best)18.65■□□□□ 0.586e-10■■■■■ 30.6
XRN2Q9H0D6 ORAOV1-202ENST00000355486 574 ntTSL 218.64■□□□□ 0.576e-10■■■■■ 30.6
XRN2Q9H0D6 PANK4-203ENST00000468002 670 ntTSL 518.61■□□□□ 0.576e-10■■■■■ 30.6
XRN2Q9H0D6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.46■□□□□ 0.554e-6■■■■■ 30.6
XRN2Q9H0D6 CCDC130-212ENST00000593174 1783 ntTSL 518.39■□□□□ 0.538e-8■■■■■ 30.6
XRN2Q9H0D6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.538e-8■■■■■ 30.6
XRN2Q9H0D6 ZNF331-206ENST00000504033 578 ntTSL 518.27■□□□□ 0.526e-7■■■■■ 30.6
XRN2Q9H0D6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.04■□□□□ 0.481e-14■■■■■ 30.6
XRN2Q9H0D6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.474e-6■■■■■ 30.6
XRN2Q9H0D6 ZNF331-211ENST00000509047 670 ntTSL 317.71■□□□□ 0.436e-7■■■■■ 30.6
XRN2Q9H0D6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.41■□□□□ 0.386e-10■■■■■ 30.6
XRN2Q9H0D6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.39■□□□□ 0.376e-10■■■■■ 30.6
XRN2Q9H0D6 RELA-204ENST00000525658 808 ntTSL 217.27■□□□□ 0.361e-14■■■■■ 30.6
XRN2Q9H0D6 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.93■□□□□ 0.36e-10■■■■■ 30.6
XRN2Q9H0D6 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC16.82■□□□□ 0.286e-10■■■■■ 30.6
XRN2Q9H0D6 PANK4-202ENST00000435556 2524 ntTSL 216.67■□□□□ 0.266e-10■■■■■ 30.6
XRN2Q9H0D6 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.266e-10■■■■■ 30.6
XRN2Q9H0D6 RELA-225ENST00000534558 692 ntTSL 516.66■□□□□ 0.261e-14■■■■■ 30.6
XRN2Q9H0D6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.263e-6■■■■■ 30.6
XRN2Q9H0D6 RELA-220ENST00000532999 1341 ntTSL 516.55■□□□□ 0.241e-14■■■■■ 30.6
XRN2Q9H0D6 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.24■□□□□ 0.193e-6■■■■■ 30.6
XRN2Q9H0D6 AAMP-209ENST00000489767 1833 ntTSL 516.24■□□□□ 0.193e-6■■■■■ 30.6
XRN2Q9H0D6 RELA-206ENST00000525858 754 ntTSL 216.14■□□□□ 0.171e-14■■■■■ 30.6
XRN2Q9H0D6 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.166e-10■■■■■ 30.6
XRN2Q9H0D6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.95■□□□□ 0.146e-10■■■■■ 30.6
XRN2Q9H0D6 CCDC130-208ENST00000588071 1157 ntTSL 515.82■□□□□ 0.128e-8■■■■■ 30.6
XRN2Q9H0D6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.126e-8■■■■■ 30.6
XRN2Q9H0D6 RELA-203ENST00000525301 623 ntTSL 315.72■□□□□ 0.111e-14■■■■■ 30.6
XRN2Q9H0D6 AAMP-208ENST00000475678 2270 ntTSL 215.7■□□□□ 0.13e-6■■■■■ 30.6
XRN2Q9H0D6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.14e-6■■■■■ 30.6
XRN2Q9H0D6 CCDC130-202ENST00000540216 995 ntTSL 215.68■□□□□ 0.18e-8■■■■■ 30.6
XRN2Q9H0D6 AAMP-203ENST00000422731 742 ntTSL 315.67■□□□□ 0.13e-6■■■■■ 30.6
XRN2Q9H0D6 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.16e-10■■■■■ 30.6
Retrieved 100 of 21,068 protein–RNA pairs in 592.7 ms