RNA–Protein interactions for RNA: ENST00000586666.5

CCDC130-205, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 914 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-205ENST00000586666 NISCHQ9Y2I1 1504 aa40.13■■■■■ 4.01
CCDC130-205ENST00000586666 CCDC180Q9P1Z9 1646 aa36■■■■□ 3.35
CCDC130-205ENST00000586666 ABCC9O60706 1549 aa35.98■■■■□ 3.35
CCDC130-205ENST00000586666 RB1CC1Q8TDY2 1594 aa34.23■■■■□ 3.07
CCDC130-205ENST00000586666 NACADO15069 1562 aa33.99■■■■□ 3.03
CCDC130-205ENST00000586666 DCAF8L2P0C7V8 631 aa33.9■■■■□ 3.02
CCDC130-205ENST00000586666 DNAJC5BQ9UF47 199 aa33.63■■■□□ 2.97
CCDC130-205ENST00000586666 UNC13AQ9UPW8 1703 aa33.51■■■□□ 2.96
CCDC130-205ENST00000586666 PABPN1Q86U42 306 aaKnown RBP eCLIP33.49■■■□□ 2.95
CCDC130-205ENST00000586666 MYO15BQ96JP2 1530 aa33.48■■■□□ 2.95
CCDC130-205ENST00000586666 ZCCHC6Q5VYS8 1495 aaKnown RBP33.28■■■□□ 2.92
CCDC130-205ENST00000586666 BICRAQ9NZM4 1560 aa33.24■■■□□ 2.91
CCDC130-205ENST00000586666 DCAF1Q9Y4B6 1507 aa33.11■■■□□ 2.89
CCDC130-205ENST00000586666 SCRIBQ14160 1630 aa32.88■■■□□ 2.85
CCDC130-205ENST00000586666 SHROOM4Q9ULL8 1493 aa32.74■■■□□ 2.83
CCDC130-205ENST00000586666 CC2D2AQ9P2K1 1620 aa32.48■■■□□ 2.79
CCDC130-205ENST00000586666 EIF4G1Q04637 1599 aaKnown RBP32.42■■■□□ 2.78
CCDC130-205ENST00000586666 CECR2Q9BXF3 1484 aa32.37■■■□□ 2.77
CCDC130-205ENST00000586666 NCAPD3P42695 1498 aa31.35■■■□□ 2.61
CCDC130-205ENST00000586666 SMARCA4P51532 1647 aa31.32■■■□□ 2.6
CCDC130-205ENST00000586666 ATAD2BQ9ULI0 1458 aa31.3■■■□□ 2.6
CCDC130-205ENST00000586666 SMARCA2P51531 1590 aa31.22■■■□□ 2.59
CCDC130-205ENST00000586666 HMGXB3Q12766 1538 aa31.16■■■□□ 2.58
CCDC130-205ENST00000586666 BAZ1AQ9NRL2 1556 aaPredicted RBP31.15■■■□□ 2.58
CCDC130-205ENST00000586666 ERCC6Q03468 1493 aa31.05■■■□□ 2.56
CCDC130-205ENST00000586666 BAZ1BQ9UIG0 1483 aaKnown RBP31.03■■■□□ 2.56
CCDC130-205ENST00000586666 PEG3Q9GZU2 1588 aa30.96■■■□□ 2.55
CCDC130-205ENST00000586666 MROH2BQ7Z745 1585 aa30.95■■■□□ 2.54
CCDC130-205ENST00000586666 NESP48681 1621 aa30.92■■■□□ 2.54
CCDC130-205ENST00000586666 CUX2O14529 1486 aa30.92■■■□□ 2.54
CCDC130-205ENST00000586666 DNAJC5Q9H3Z4 198 aa30.8■■■□□ 2.52
CCDC130-205ENST00000586666 LAMC3Q9Y6N6 1575 aa30.67■■■□□ 2.5
CCDC130-205ENST00000586666 WIZO95785 1651 aa30.61■■■□□ 2.49
CCDC130-205ENST00000586666 THOC2Q8NI27 1593 aaKnown RBP30.59■■■□□ 2.49
CCDC130-205ENST00000586666 KIF21AQ7Z4S6 1674 aa30.55■■■□□ 2.48
CCDC130-205ENST00000586666 PDS5BQ9NTI5 1447 aa30.47■■■□□ 2.47
CCDC130-205ENST00000586666 CADPSQ9ULU8 1353 aa30.41■■■□□ 2.46
CCDC130-205ENST00000586666 RSF1Q96T23 1441 aaPredicted RBP30.3■■■□□ 2.44
CCDC130-205ENST00000586666 MRC2Q9UBG0 1479 aa30.25■■■□□ 2.43
CCDC130-205ENST00000586666 TOP2AP11388 1531 aaKnown RBP30.2■■■□□ 2.42
CCDC130-205ENST00000586666 WDR62O43379 1518 aa30.17■■■□□ 2.42
CCDC130-205ENST00000586666 CEP164Q9UPV0 1460 aa30.15■■■□□ 2.42
CCDC130-205ENST00000586666 FANCD2Q9BXW9 1451 aa30.12■■■□□ 2.41
CCDC130-205ENST00000586666 CFTRP13569 1480 aa30.09■■■□□ 2.41
CCDC130-205ENST00000586666 PRDM2Q13029 1718 aa29.87■■■□□ 2.37
CCDC130-205ENST00000586666 URB2Q14146 1524 aaKnown RBP29.86■■■□□ 2.37
CCDC130-205ENST00000586666 CCDC88BA6NC98 1476 aa29.84■■■□□ 2.37
CCDC130-205ENST00000586666 TRIM41Q8WV44 630 aa29.58■■■□□ 2.33
CCDC130-205ENST00000586666 TOPBP1Q92547 1522 aa29.55■■■□□ 2.32
CCDC130-205ENST00000586666 IFT140Q96RY7 1462 aa29.52■■■□□ 2.32
CCDC130-205ENST00000586666 OSCARQ8IYS5 282 aa29.5■■■□□ 2.31
CCDC130-205ENST00000586666 ZNF608Q9ULD9 1512 aaPredicted RBP29.5■■■□□ 2.31
CCDC130-205ENST00000586666 DNMBPQ6XZF7 1577 aa29.46■■■□□ 2.31
CCDC130-205ENST00000586666 ABCC8Q09428 1581 aa29.44■■■□□ 2.3
CCDC130-205ENST00000586666 EIF4G3O43432 1585 aaKnown RBP29.36■■■□□ 2.29
CCDC130-205ENST00000586666 TARBP1Q13395 1621 aaKnown RBP29.29■■■□□ 2.28
CCDC130-205ENST00000586666 POLA1P09884 1462 aaPredicted RBP29.25■■■□□ 2.27
CCDC130-205ENST00000586666 AQRO60306 1485 aaKnown RBP eCLIP29.23■■■□□ 2.273e-6■■■■□ 20.5
CCDC130-205ENST00000586666 RIMBP3CA6NJZ7 1639 aa29.19■■■□□ 2.26
CCDC130-205ENST00000586666 RIMBP3BA6NNM3 1639 aa29.19■■■□□ 2.26
CCDC130-205ENST00000586666 RIMBP3Q9UFD9 1639 aa29.19■■■□□ 2.26
CCDC130-205ENST00000586666 RAD54L2Q9Y4B4 1467 aa29.17■■■□□ 2.26
CCDC130-205ENST00000586666 CHD1O14646 1710 aa29.15■■■□□ 2.26
CCDC130-205ENST00000586666 SOGA1O94964 1423 aa29.11■■■□□ 2.25
CCDC130-205ENST00000586666 FGD5Q6ZNL6 1462 aa29.1■■■□□ 2.25
CCDC130-205ENST00000586666 ARHGEF11O15085 1522 aa29.08■■■□□ 2.25
CCDC130-205ENST00000586666 CUX1P39880 1505 aa29.08■■■□□ 2.25
CCDC130-205ENST00000586666 SUPT5HO00267 1087 aaKnown RBP29.07■■■□□ 2.24
CCDC130-205ENST00000586666 TDRD9Q8NDG6 1382 aaKnown RBP29.06■■■□□ 2.24
CCDC130-205ENST00000586666 FBLN2P98095 1184 aa29.05■■■□□ 2.24
CCDC130-205ENST00000586666 WDR97A6NE52 1622 aa28.95■■■□□ 2.23
CCDC130-205ENST00000586666 SNAPC4Q5SXM2 1469 aa28.95■■■□□ 2.22
CCDC130-205ENST00000586666 CYB5RLQ6IPT4 315 aa28.85■■■□□ 2.21
CCDC130-205ENST00000586666 GRIN2BQ13224 1484 aa28.85■■■□□ 2.21
CCDC130-205ENST00000586666 MAGI1Q96QZ7 1491 aaPredicted RBP28.83■■■□□ 2.21
CCDC130-205ENST00000586666 PBRM1Q86U86 1689 aa28.8■■■□□ 2.2
CCDC130-205ENST00000586666 ARAP1Q96P48 1450 aa28.8■■■□□ 2.2
CCDC130-205ENST00000586666 CHMP7Q8WUX9 453 aaPredicted RBP28.8■■■□□ 2.2
CCDC130-205ENST00000586666 GAPVD1Q14C86 1478 aa28.77■■■□□ 2.2
CCDC130-205ENST00000586666 SYNJ1O43426 1573 aa28.76■■■□□ 2.19
CCDC130-205ENST00000586666 CLASP1Q7Z460 1538 aa28.76■■■□□ 2.19
CCDC130-205ENST00000586666 SYNJ2O15056 1496 aa28.75■■■□□ 2.19
CCDC130-205ENST00000586666 ABCA10Q8WWZ4 1543 aa28.73■■■□□ 2.19
CCDC130-205ENST00000586666 ABCA5Q8WWZ7 1642 aa28.72■■■□□ 2.19
CCDC130-205ENST00000586666 WRNQ14191 1432 aaPredicted RBP eCLIP28.63■■■□□ 2.17
CCDC130-205ENST00000586666 BIVM-ERCC5R4GMW8 1640 aa28.63■■■□□ 2.17
CCDC130-205ENST00000586666 TOP2BQ02880 1626 aa28.62■■■□□ 2.17
CCDC130-205ENST00000586666 TRHP20396 242 aaPredicted RBP28.53■■■□□ 2.16
CCDC130-205ENST00000586666 ADAMTS12P58397 1594 aa28.51■■■□□ 2.15
CCDC130-205ENST00000586666 GRIN2AQ12879 1464 aa28.48■■■□□ 2.15
CCDC130-205ENST00000586666 CEP170Q5SW79 1584 aa28.41■■■□□ 2.14
CCDC130-205ENST00000586666 FHAD1B1AJZ9 1412 aa28.39■■■□□ 2.14
CCDC130-205ENST00000586666 ERICH3Q5RHP9 1530 aa28.38■■■□□ 2.13
CCDC130-205ENST00000586666 NUP160Q12769 1436 aa28.36■■■□□ 2.13
CCDC130-205ENST00000586666 ERCC6L2Q5T890 1561 aa28.36■■■□□ 2.13
CCDC130-205ENST00000586666 SHROOM2Q13796 1616 aa28.25■■■□□ 2.11
CCDC130-205ENST00000586666 PRG4Q92954 1404 aaPredicted RBP28.11■■■□□ 2.09
CCDC130-205ENST00000586666 RUSC2Q8N2Y8 1516 aa28.11■■■□□ 2.09
CCDC130-205ENST00000586666 JPH4Q96JJ6 628 aa28.06■■■□□ 2.08
CCDC130-205ENST00000586666 KIF27Q86VH2 1401 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms