RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 NISCHQ9Y2I1 1504 aa33.07■■■□□ 2.89
CCDC130-208ENST00000588071 CCDC180Q9P1Z9 1646 aa29.15■■■□□ 2.26
CCDC130-208ENST00000588071 ABCC9O60706 1549 aa28.07■■■□□ 2.08
CCDC130-208ENST00000588071 ZCCHC6Q5VYS8 1495 aaKnown RBP27.63■■■□□ 2.01
CCDC130-208ENST00000588071 DCAF8L2P0C7V8 631 aa27.61■■■□□ 2.01
CCDC130-208ENST00000588071 DCAF1Q9Y4B6 1507 aa27.34■■□□□ 1.97
CCDC130-208ENST00000588071 NACADO15069 1562 aa27.3■■□□□ 1.96
CCDC130-208ENST00000588071 MYO15BQ96JP2 1530 aa27.24■■□□□ 1.95
CCDC130-208ENST00000588071 RB1CC1Q8TDY2 1594 aa27.2■■□□□ 1.94
CCDC130-208ENST00000588071 SCRIBQ14160 1630 aa26.69■■□□□ 1.86
CCDC130-208ENST00000588071 UNC13AQ9UPW8 1703 aa26.62■■□□□ 1.85
CCDC130-208ENST00000588071 SHROOM4Q9ULL8 1493 aa26.57■■□□□ 1.84
CCDC130-208ENST00000588071 PABPN1Q86U42 306 aaKnown RBP eCLIP26.36■■□□□ 1.81
CCDC130-208ENST00000588071 BICRAQ9NZM4 1560 aa26.32■■□□□ 1.8
CCDC130-208ENST00000588071 CECR2Q9BXF3 1484 aa25.72■■□□□ 1.71
CCDC130-208ENST00000588071 EIF4G1Q04637 1599 aaKnown RBP25.61■■□□□ 1.69
CCDC130-208ENST00000588071 BAZ1AQ9NRL2 1556 aaPredicted RBP25.6■■□□□ 1.69
CCDC130-208ENST00000588071 SMARCA4P51532 1647 aa25.55■■□□□ 1.68
CCDC130-208ENST00000588071 MROH2BQ7Z745 1585 aa25.5■■□□□ 1.67
CCDC130-208ENST00000588071 RSF1Q96T23 1441 aaPredicted RBP25.41■■□□□ 1.66
CCDC130-208ENST00000588071 CC2D2AQ9P2K1 1620 aa25.4■■□□□ 1.66
CCDC130-208ENST00000588071 SUPT5HO00267 1087 aaKnown RBP25.32■■□□□ 1.64
CCDC130-208ENST00000588071 WIZO95785 1651 aa25.3■■□□□ 1.64
CCDC130-208ENST00000588071 SMARCA2P51531 1590 aa25.27■■□□□ 1.64
CCDC130-208ENST00000588071 ATAD2BQ9ULI0 1458 aa25.27■■□□□ 1.64
CCDC130-208ENST00000588071 DNAJC5BQ9UF47 199 aa25.26■■□□□ 1.63
CCDC130-208ENST00000588071 PEG3Q9GZU2 1588 aa25.24■■□□□ 1.63
CCDC130-208ENST00000588071 NCAPD3P42695 1498 aa25.16■■□□□ 1.62
CCDC130-208ENST00000588071 BAZ1BQ9UIG0 1483 aaKnown RBP25.12■■□□□ 1.61
CCDC130-208ENST00000588071 HMGXB3Q12766 1538 aa25.07■■□□□ 1.6
CCDC130-208ENST00000588071 TOP2AP11388 1531 aaKnown RBP25.01■■□□□ 1.59
CCDC130-208ENST00000588071 CCDC88BA6NC98 1476 aa24.75■■□□□ 1.55
CCDC130-208ENST00000588071 CADPSQ9ULU8 1353 aa24.49■■□□□ 1.51
CCDC130-208ENST00000588071 CFTRP13569 1480 aa24.43■■□□□ 1.5
CCDC130-208ENST00000588071 NESP48681 1621 aa24.43■■□□□ 1.5
CCDC130-208ENST00000588071 LAMC3Q9Y6N6 1575 aa24.42■■□□□ 1.5
CCDC130-208ENST00000588071 PRDM2Q13029 1718 aa24.35■■□□□ 1.49
CCDC130-208ENST00000588071 PDS5BQ9NTI5 1447 aa24.27■■□□□ 1.48
CCDC130-208ENST00000588071 FANCD2Q9BXW9 1451 aa24.2■■□□□ 1.47
CCDC130-208ENST00000588071 KIF21AQ7Z4S6 1674 aa24.18■■□□□ 1.46
CCDC130-208ENST00000588071 ERCC6Q03468 1493 aa24.17■■□□□ 1.46
CCDC130-208ENST00000588071 CEP164Q9UPV0 1460 aa24.13■■□□□ 1.45
CCDC130-208ENST00000588071 ABCC8Q09428 1581 aa24.02■■□□□ 1.44
CCDC130-208ENST00000588071 MRC2Q9UBG0 1479 aa23.97■■□□□ 1.43
CCDC130-208ENST00000588071 WRNQ14191 1432 aaPredicted RBP eCLIP23.96■■□□□ 1.43
CCDC130-208ENST00000588071 URB2Q14146 1524 aaKnown RBP23.9■■□□□ 1.42
CCDC130-208ENST00000588071 CHIC1Q5VXU3 224 aa23.9■■□□□ 1.42
CCDC130-208ENST00000588071 TRIM41Q8WV44 630 aa23.89■■□□□ 1.41
CCDC130-208ENST00000588071 DNMBPQ6XZF7 1577 aa23.89■■□□□ 1.41
CCDC130-208ENST00000588071 THOC2Q8NI27 1593 aaKnown RBP23.89■■□□□ 1.41
CCDC130-208ENST00000588071 CUX1P39880 1505 aa23.89■■□□□ 1.41
CCDC130-208ENST00000588071 TOPBP1Q92547 1522 aa23.88■■□□□ 1.41
CCDC130-208ENST00000588071 SYNJ1O43426 1573 aa23.86■■□□□ 1.41
CCDC130-208ENST00000588071 WDR62O43379 1518 aa23.84■■□□□ 1.41
CCDC130-208ENST00000588071 TOP2BQ02880 1626 aa23.83■■□□□ 1.41
CCDC130-208ENST00000588071 BIVM-ERCC5R4GMW8 1640 aa23.82■■□□□ 1.4
CCDC130-208ENST00000588071 FGD5Q6ZNL6 1462 aa23.75■■□□□ 1.39
CCDC130-208ENST00000588071 POLA1P09884 1462 aaPredicted RBP23.69■■□□□ 1.38
CCDC130-208ENST00000588071 SOGA1O94964 1423 aa23.67■■□□□ 1.38
CCDC130-208ENST00000588071 CUX2O14529 1486 aa23.64■■□□□ 1.38
CCDC130-208ENST00000588071 RAD54L2Q9Y4B4 1467 aa23.62■■□□□ 1.37
CCDC130-208ENST00000588071 IFT140Q96RY7 1462 aa23.59■■□□□ 1.37
CCDC130-208ENST00000588071 TARBP1Q13395 1621 aaKnown RBP23.55■■□□□ 1.36
CCDC130-208ENST00000588071 ABCA10Q8WWZ4 1543 aa23.51■■□□□ 1.35
CCDC130-208ENST00000588071 WDR97A6NE52 1622 aa23.48■■□□□ 1.35
CCDC130-208ENST00000588071 TDRD9Q8NDG6 1382 aaKnown RBP23.46■■□□□ 1.35
CCDC130-208ENST00000588071 KIF27Q86VH2 1401 aa23.44■■□□□ 1.34
CCDC130-208ENST00000588071 ZNF608Q9ULD9 1512 aaPredicted RBP23.43■■□□□ 1.34
CCDC130-208ENST00000588071 AQRO60306 1485 aaKnown RBP eCLIP23.41■■□□□ 1.342e-9■■■■□ 24.2
CCDC130-208ENST00000588071 FAM9AQ8IZU1 332 aaPredicted RBP23.4■■□□□ 1.34
CCDC130-208ENST00000588071 RUSC2Q8N2Y8 1516 aa23.39■■□□□ 1.34
CCDC130-208ENST00000588071 GAPVD1Q14C86 1478 aa23.38■■□□□ 1.33
CCDC130-208ENST00000588071 EIF4G3O43432 1585 aaKnown RBP23.36■■□□□ 1.33
CCDC130-208ENST00000588071 ABCA5Q8WWZ7 1642 aa23.36■■□□□ 1.33
CCDC130-208ENST00000588071 EEA1Q15075 1411 aa23.33■■□□□ 1.33
CCDC130-208ENST00000588071 PBRM1Q86U86 1689 aa23.31■■□□□ 1.32
CCDC130-208ENST00000588071 CSRNP3Q8WYN3 585 aa23.29■■□□□ 1.32
CCDC130-208ENST00000588071 GRIN2BQ13224 1484 aa23.29■■□□□ 1.32
CCDC130-208ENST00000588071 IGF1RP08069 1367 aa23.27■■□□□ 1.31
CCDC130-208ENST00000588071 ERICH3Q5RHP9 1530 aa23.25■■□□□ 1.31
CCDC130-208ENST00000588071 SNAPC4Q5SXM2 1469 aa23.17■■□□□ 1.3
CCDC130-208ENST00000588071 CARMIL1Q5VZK9 1371 aa23.17■■□□□ 1.3
CCDC130-208ENST00000588071 CUL7Q14999 1698 aa23.16■■□□□ 1.3
CCDC130-208ENST00000588071 MAGI1Q96QZ7 1491 aaPredicted RBP23.16■■□□□ 1.3
CCDC130-208ENST00000588071 FHAD1B1AJZ9 1412 aa23.12■■□□□ 1.29
CCDC130-208ENST00000588071 FBLN2P98095 1184 aa23.12■■□□□ 1.29
CCDC130-208ENST00000588071 CHMP7Q8WUX9 453 aaPredicted RBP23.11■■□□□ 1.29
CCDC130-208ENST00000588071 ADAMTS12P58397 1594 aa23.1■■□□□ 1.29
CCDC130-208ENST00000588071 EHMT2Q96KQ7 1210 aa23.09■■□□□ 1.29
CCDC130-208ENST00000588071 PRXQ9BXM0 1461 aa23.07■■□□□ 1.28
CCDC130-208ENST00000588071 SYNJ2O15056 1496 aa23.06■■□□□ 1.28
CCDC130-208ENST00000588071 RAPGEF2Q9Y4G8 1499 aa23.06■■□□□ 1.28
CCDC130-208ENST00000588071 KIF21BO75037 1637 aa23.04■■□□□ 1.28
CCDC130-208ENST00000588071 CHD1O14646 1710 aa23.02■■□□□ 1.28
CCDC130-208ENST00000588071 LOC105371045A0A1W2PR82 267 aa22.98■■□□□ 1.27
CCDC130-208ENST00000588071 UBTFP17480 764 aaKnown RBP22.98■■□□□ 1.27
CCDC130-208ENST00000588071 GRIN2AQ12879 1464 aa22.98■■□□□ 1.27
CCDC130-208ENST00000588071 GOLGA3Q08378 1498 aa22.97■■□□□ 1.27
CCDC130-208ENST00000588071 OSCARQ8IYS5 282 aa22.87■■□□□ 1.25
CCDC130-208ENST00000588071 CEP170Q5SW79 1584 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms